Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K19
         (583 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z68303-7|CAA92642.2|  445|Caenorhabditis elegans Hypothetical pr...    28   4.2  
AF435979-1|AAM46663.1|  445|Caenorhabditis elegans equilibrative...    28   4.2  
Z81034-1|CAB02726.1|  194|Caenorhabditis elegans Hypothetical pr...    27   9.7  

>Z79601-5|CAB01882.1|  450|Caenorhabditis elegans Hypothetical
           protein K09A9.3 protein.
          Length = 450

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +2

Query: 104 LLNYPTNYXDTVPNTLKLHATFYFTLLLCPSLMTYVR 214
           + NY   + +  P  + +   F+ TL + P +M YV+
Sbjct: 268 MANYIATFKEAFPQLINVFLVFFVTLSIFPGVMMYVK 304


>Z68303-7|CAA92642.2|  445|Caenorhabditis elegans Hypothetical
           protein ZK809.4 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 110 NYPTNYXDTVPNTLKLHATFYFTLLLCPSLMTYVR 214
           NY   + +  P  + +   F+ TL + P +M YV+
Sbjct: 265 NYIATFKEAFPQLINVFLVFFVTLSIFPGVMMYVK 299


>AF435979-1|AAM46663.1|  445|Caenorhabditis elegans equilibrative
           nucleoside transporter1 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 4.2
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 110 NYPTNYXDTVPNTLKLHATFYFTLLLCPSLMTYVR 214
           NY   + +  P  + +   F+ TL + P +M YV+
Sbjct: 265 NYIATFKEAFPQLINVFLVFFVTLSIFPGVMMYVK 299


>Z81034-1|CAB02726.1|  194|Caenorhabditis elegans Hypothetical
           protein C15C6.1 protein.
          Length = 194

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 410 LVELLVAHQSPSCFSLXNWKFYVFCHPYXLIL 315
           +V + + H   SC++L  + FY F  PY +++
Sbjct: 89  VVAISMFHVILSCYALVIFSFYFFIKPYYILM 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,962,057
Number of Sequences: 27780
Number of extensions: 164154
Number of successful extensions: 525
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)