Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K17
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   3.8  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   8.8  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 486 HFHQPHHCIKVQHHV 442
           H H  HH I  QHHV
Sbjct: 323 HHHAGHH-IHAQHHV 336


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 144 IKMNFVIPFVSLLLW 188
           +KM  VI FV +L W
Sbjct: 285 VKMTLVIVFVFVLCW 299


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 474 PHHCIKVQH 448
           PHH IK+QH
Sbjct: 105 PHHEIKLQH 113


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,116
Number of Sequences: 336
Number of extensions: 2247
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)