BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_K15 (402 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein. 22 7.3 AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein. 22 7.3 >DQ370035-1|ABD18596.1| 93|Anopheles gambiae defensin protein. Length = 93 Score = 22.2 bits (45), Expect = 7.3 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 Query: 170 TKTTKYSLKIFTLNYVRNITC 232 T T + + K+FT + V +ITC Sbjct: 35 TVTLQSTCKLFTADVVSSITC 55 >AY973195-1|AAY41589.1| 80|Anopheles gambiae defensin 2 protein. Length = 80 Score = 22.2 bits (45), Expect = 7.3 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 Query: 170 TKTTKYSLKIFTLNYVRNITC 232 T T + + K+FT + V +ITC Sbjct: 22 TVTLQSTCKLFTADVVSSITC 42 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 294,644 Number of Sequences: 2352 Number of extensions: 5054 Number of successful extensions: 2 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2 length of database: 563,979 effective HSP length: 58 effective length of database: 427,563 effective search space used: 32067225 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -