Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K15
         (402 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF544920-1|ABQ23109.1|  126|Homo sapiens immunoglobulin heavy ch...    30   2.5  
AF262123-1|AAF80014.1|  133|Homo sapiens immunoglobulin heavy ch...    30   2.5  
AB067150-1|BAC02188.1|  122|Homo sapiens immunoglobulin heavy ch...    29   4.4  

>EF544920-1|ABQ23109.1|  126|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 126

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 113 TLIRYPPKAGISWLIREKKTKTTKYSLKI 199
           T IR PP  G+ W+    ++ TTKYS+ +
Sbjct: 35  TWIRQPPGRGLEWIGEINQSGTTKYSVSL 63


>AF262123-1|AAF80014.1|  133|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 133

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 113 TLIRYPPKAGISWLIREKKTKTTKYSLKI 199
           T IR PP  G+ W+    ++ TTKYS+ +
Sbjct: 35  TWIRQPPGRGLEWIGEINQSGTTKYSVSL 63


>AB067150-1|BAC02188.1|  122|Homo sapiens immunoglobulin heavy chain
           VHDJ region protein.
          Length = 122

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 110 CTLIRYPPKAGISWLIREKKTKTTKYSLKI 199
           CT IR PP  G+ W+     T  T Y+  +
Sbjct: 34  CTWIRRPPGKGLEWIAEISHTGNTNYNASL 63


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,500,677
Number of Sequences: 237096
Number of extensions: 690577
Number of successful extensions: 6506
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6506
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)