Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K13
         (608 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    27   0.47 
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   5.8  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          23   7.7  
AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione S-tran...    23   7.7  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 449 ITIDRACRSLTLLLXSTFDVLRLHILSFLNALPGGNG 339
           +   + C  + ++L ST+D + L+   +LN + G NG
Sbjct: 4   VITSKVCALIFIILFSTYDSVVLYPEEYLNIILGPNG 40


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -1

Query: 410 LXSTFDVLRLHILSFLNALPGGNGYAF 330
           L +    LRLH + F++    G GYAF
Sbjct: 767 LSAFLHTLRLHWVEFMSKFYEGLGYAF 793


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -3

Query: 141 NHTIFRCYWITFRAASKATFCLILLISFNMADRFEQLLRHM 19
           NH + RCY++  R  +     + +L  FN  DRF +    +
Sbjct: 100 NHYVIRCYYVYTRMETDMPGRVKMLGMFN--DRFPRFAHQL 138


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 84  FCLILLISFNMADRFEQLLRHMTKRNRV 1
           FCL LL + N  +  EQ  RH+ K  R+
Sbjct: 350 FCLGLLSNVNRNEVVEQTRRHIGKGVRL 377


>AF515522-1|AAM61889.1|  222|Anopheles gambiae glutathione
          S-transferase protein.
          Length = 222

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 11 LFVIWRSSCSNRSAILNEINKIRQNV 88
          L+  WRSSCS R  I   + +I  ++
Sbjct: 14 LYSYWRSSCSWRVRIALNLKEIPYDI 39


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,505
Number of Sequences: 2352
Number of extensions: 8222
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59291487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)