Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K13
         (608 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine rece...    28   6.0  
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ...    27   7.9  

>U97008-6|AAB52307.1|  323|Caenorhabditis elegans Serpentine
           receptor, class h protein275 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -3

Query: 144 FNHTIFR-CYWITFRAASKATFCLILLISFNMADRFEQ--LLRHMTK 13
           F + +F  C+  T   A  ATF  I+LI  NMA+R ++  L RH  K
Sbjct: 187 FRYVVFPVCFMTTLMVAESATF--IILIYGNMAERNKKLSLSRHTMK 231


>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
            protein Y73F8A.5 protein.
          Length = 1019

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 466  RVVVKIGRRTVPXKTRKELRGHRD 537
            RV+   GRR+ P  +R  LR HR+
Sbjct: 983  RVIFSKGRRSAPNNSRTTLRDHRE 1006


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,831,395
Number of Sequences: 27780
Number of extensions: 182229
Number of successful extensions: 429
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)