Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K07
         (645 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1033 - 8178974-8178982,8179123-8179215,8179311-8179341,817...    72   3e-13
11_04_0312 - 16259612-16260231,16260264-16262796                       29   2.4  
11_04_0431 + 17687408-17687603,17687772-17688115,17688951-176892...    28   5.5  
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239...    28   5.5  
09_06_0135 - 21069521-21069646,21069778-21069948,21070438-210705...    28   5.5  
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708     27   9.7  

>01_01_1033 -
           8178974-8178982,8179123-8179215,8179311-8179341,
           8179434-8179519,8179572-8179624,8180026-8180140,
           8180505-8180579,8180683-8180730
          Length = 169

 Score = 72.1 bits (169), Expect = 3e-13
 Identities = 28/62 (45%), Positives = 41/62 (66%)
 Frame = +3

Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
           F+ E+ I+ I PN   + + +ICG+FGPF   +   VPLWLA+ LK++ KC +  PDWM 
Sbjct: 19  FVAEDEIVEIVPNIRMEALNMICGDFGPFFPQIASKVPLWLAVALKKRGKCTIRTPDWMT 78

Query: 543 VE 548
           V+
Sbjct: 79  VD 80


>11_04_0312 - 16259612-16260231,16260264-16262796
          Length = 1050

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
 Frame = +3

Query: 363 FIGENRIISITPN-FTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWM 539
           F   N I+S   N    DK++++ G +GP   G  + V   L  M  QK+   VI  D  
Sbjct: 188 FGSRNEIVSQIINALKEDKVHIV-GVYGPCGIGKSLLVAAILEKMKTQKEFDEVITVDLR 246

Query: 540 DVEXLENIK 566
           +   LE IK
Sbjct: 247 EKPGLEEIK 255


>11_04_0431 +
           17687408-17687603,17687772-17688115,17688951-17689287,
           17690012-17690087,17690324-17690351,17691047-17691154
          Length = 362

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -3

Query: 469 FTGKPARNGPNSPH 428
           F G+PARN P+SPH
Sbjct: 255 FLGQPARNDPSSPH 268


>11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,
            2397417-2397458,2397670-2397723,2397836-2397868,
            2397959-2398039,2398144-2398230,2398313-2398388,
            2398633-2398808,2398912-2399034,2399249-2399361,
            2399521-2399632,2400054-2400273,2401986-2402314,
            2402408-2402713,2403580-2403878,2404079-2404181,
            2404266-2404369,2404840-2404906,2404911-2405076,
            2405241-2405956
          Length = 1157

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +3

Query: 390  ITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKC-HVIPPDWMDVEXLE 557
            +T  F  ++    C  F    AG  + + L ++ MLK + KC  V  PD +D E ++
Sbjct: 1094 LTSYFISEQAPFNCKGFSFLVAGFFLAISLGISFMLKPEAKCTRVAVPDQLDHEAVQ 1150


>09_06_0135 -
           21069521-21069646,21069778-21069948,21070438-21070524,
           21070607-21070788,21070905-21070983
          Length = 214

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 437 FTAYQVYFIMGKVWCYTDYPILT 369
           F A +V   + K+WCY +Y I T
Sbjct: 60  FIAMEVVDSLAKIWCYEEYSIAT 82


>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
          Length = 2033

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 8/30 (26%), Positives = 18/30 (60%)
 Frame = +3

Query: 369 GENRIISITPNFTHDKIYLICGEFGPFRAG 458
           G++ ++++ PN+  +     C + GPF+ G
Sbjct: 325 GDHGVLAVVPNWNCNSTDEFCSQLGPFQTG 354


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,486,827
Number of Sequences: 37544
Number of extensions: 268017
Number of successful extensions: 528
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)