Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_K07
(645 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein. 106 8e-23
BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2 ... 106 8e-23
BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2 ... 106 8e-23
BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2 ... 106 8e-23
AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex... 106 8e-23
AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens ... 106 8e-23
AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein. 106 8e-23
AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein. 106 8e-23
>CR457186-1|CAG33467.1| 185|Homo sapiens Pfs2 protein.
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
>BC062444-1|AAH62444.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
>BC010164-1|AAH10164.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
>BC003186-1|AAH03186.1| 185|Homo sapiens GINS complex subunit 2
(Psf2 homolog) protein.
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
>AK223123-1|BAD96843.1| 185|Homo sapiens DNA replication complex
GINS protein PSF2 variant protein.
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
>AK001275-1|BAA91595.1| 185|Homo sapiens protein ( Homo sapiens
cDNA FLJ10413 fis, clone NT2RP1000063. ).
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
>AF201939-1|AAF86875.1| 185|Homo sapiens DC5 protein.
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
>AF151880-1|AAD34117.1| 185|Homo sapiens CGI-122 protein protein.
Length = 185
Score = 106 bits (254), Expect = 8e-23
Identities = 43/73 (58%), Positives = 57/73 (78%)
Frame = +3
Query: 363 FIGENRIISITPNFTHDKIYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWMD 542
F+ E +++I PNF+ DKIYLI G+ GPF GLPV VPLWLAI LKQ+QKC ++PP+WMD
Sbjct: 8 FLAEKELVTIIPNFSLDKIYLIGGDLGPFNPGLPVEVPLWLAINLKQRQKCRLLPPEWMD 67
Query: 543 VEXLENIKQEEKR 581
VE LE ++ E++
Sbjct: 68 VEKLEKMRDHERK 80
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,489,305
Number of Sequences: 237096
Number of extensions: 1681372
Number of successful extensions: 6706
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6706
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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