Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K07
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92784-4|CAB07195.1|  180|Caenorhabditis elegans Hypothetical pr...    80   1e-15
U53181-4|AAO12438.1|  440|Caenorhabditis elegans Heavy chain, un...    30   1.2  
U53181-3|AAM29688.1|  516|Caenorhabditis elegans Heavy chain, un...    30   1.2  
U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain, un...    30   1.2  
U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain, un...    30   1.2  
U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.        30   1.2  
Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical pr...    29   3.7  

>Z92784-4|CAB07195.1|  180|Caenorhabditis elegans Hypothetical
           protein F31C3.5 protein.
          Length = 180

 Score = 80.2 bits (189), Expect = 1e-15
 Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 363 FIGENRIISITPNFTHDK-IYLICGEFGPFRAGLPVNVPLWLAIMLKQKQKCHVIPPDWM 539
           FI  N +I + P+ + D+ I+LI G+ GPF AG+P  +P+W AI++K+K  C V+ P WM
Sbjct: 8   FIAGNSLIEVIPSISDDRPIHLISGDIGPFEAGVPCRIPVWTAILMKRKHNCKVVAPQWM 67

Query: 540 DVEXLENIKQEEKRS 584
           DV+ L+ I   E  S
Sbjct: 68  DVDELKKILTSETES 82


>U53181-4|AAO12438.1|  440|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 2, isoform e protein.
          Length = 440

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -2

Query: 491 DSQPEWYVHR*TSTKRTKFTAYQVYFIMGKV-----WCYTDYPILTNKLYHVFIYHIFLG 327
           DSQPEW+V    +    +F AY V  I  ++      CYT   ++   + HV    I  G
Sbjct: 149 DSQPEWHVANTETQNSYRFKAYDVAPIRDQLKLRIEECYTS--LMKKAIEHVLSPKIVPG 206

Query: 326 ILYYD 312
           IL ++
Sbjct: 207 ILQHE 211


>U53181-3|AAM29688.1|  516|Caenorhabditis elegans Heavy chain,
           unconventional myosinprotein 2, isoform c protein.
          Length = 516

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -2

Query: 491 DSQPEWYVHR*TSTKRTKFTAYQVYFIMGKV-----WCYTDYPILTNKLYHVFIYHIFLG 327
           DSQPEW+V    +    +F AY V  I  ++      CYT   ++   + HV    I  G
Sbjct: 225 DSQPEWHVANTETQNSYRFKAYDVAPIRDQLKLRIEECYTS--LMKKAIEHVLSPKIVPG 282

Query: 326 ILYYD 312
           IL ++
Sbjct: 283 ILQHE 287


>U53181-2|AAR04675.1| 1837|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 2, isoform a protein.
          Length = 1837

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -2

Query: 491  DSQPEWYVHR*TSTKRTKFTAYQVYFIMGKV-----WCYTDYPILTNKLYHVFIYHIFLG 327
            DSQPEW+V    +    +F AY V  I  ++      CYT   ++   + HV    I  G
Sbjct: 1546 DSQPEWHVANTETQNSYRFKAYDVAPIRDQLKLRIEECYTS--LMKKAIEHVLSPKIVPG 1603

Query: 326  ILYYD 312
            IL ++
Sbjct: 1604 ILQHE 1608


>U53181-1|AAR04676.1| 1839|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 2, isoform b protein.
          Length = 1839

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -2

Query: 491  DSQPEWYVHR*TSTKRTKFTAYQVYFIMGKV-----WCYTDYPILTNKLYHVFIYHIFLG 327
            DSQPEW+V    +    +F AY V  I  ++      CYT   ++   + HV    I  G
Sbjct: 1548 DSQPEWHVANTETQNSYRFKAYDVAPIRDQLKLRIEECYTS--LMKKAIEHVLSPKIVPG 1605

Query: 326  ILYYD 312
            IL ++
Sbjct: 1606 ILQHE 1610


>U52516-1|AAA97926.1| 1839|Caenorhabditis elegans hum-2 protein.
          Length = 1839

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
 Frame = -2

Query: 491  DSQPEWYVHR*TSTKRTKFTAYQVYFIMGKV-----WCYTDYPILTNKLYHVFIYHIFLG 327
            DSQPEW+V    +    +F AY V  I  ++      CYT   ++   + HV    I  G
Sbjct: 1548 DSQPEWHVANTETQNSYRFKAYDVAPIRDQLKLRIEECYTS--LMKKAIEHVLSPKIVPG 1605

Query: 326  ILYYD 312
            IL ++
Sbjct: 1606 ILQHE 1610


>Z83125-8|CAB05623.1|  507|Caenorhabditis elegans Hypothetical
           protein T15D6.10 protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = -2

Query: 557 LQXFHVHPVRRDNMALLFLL*HDSQPEWYVHR*TSTKRTKFTAYQVYFIMGKVW 396
           L  FH   +   +  + +++ H++ PE Y +    T    F  YQ    +GKVW
Sbjct: 328 LDTFHTASIANLHFRVKWVMKHNNTPERYENDKQLTSEMLFHKYQNLSRIGKVW 381


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,574,308
Number of Sequences: 27780
Number of extensions: 242794
Number of successful extensions: 545
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 545
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)