Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K04
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   5.0  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   5.0  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   5.0  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   5.0  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   5.0  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   5.0  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 385 DINWDKINKKVDXISDKIEKEATGKS 462
           DIN D   K +D +   ++    GKS
Sbjct: 132 DINMDYFKKCIDPVDKVLQDAKIGKS 157


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 385 DINWDKINKKVDXISDKIEKEATGKS 462
           DIN D   K +D +   ++    GKS
Sbjct: 132 DINMDYFKKCIDPVDKVLQDAKIGKS 157


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 345 STSKSNSCYFSNLHRNETS 289
           STS SNS   +NL +NE S
Sbjct: 327 STSNSNSPSSTNLIQNEAS 345


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 473 LKRSLFLSKVIHIIQQGLREDF 538
           +K SL L   +H I + L EDF
Sbjct: 69  IKESLRLYPSVHFISRKLGEDF 90


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 345 STSKSNSCYFSNLHRNETS 289
           STS SNS   +NL +NE S
Sbjct: 116 STSNSNSPSSTNLIQNEAS 134


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -1

Query: 345 STSKSNSCYFSNLHRNETS 289
           STS SNS   +NL +NE S
Sbjct: 116 STSNSNSPSSTNLIQNEAS 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,108
Number of Sequences: 336
Number of extensions: 2153
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)