BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_K04 (651 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_12317| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09 SB_18720| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) 28 5.7 SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75) 28 5.7 >SB_12317| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 155 Score = 59.3 bits (137), Expect = 3e-09 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 17/154 (11%) Frame = +1 Query: 142 MAKPKN--EDASEEAKKIVDDA----KNFIERAIA-DIGKTSATKQLILGTASGWITGFI 300 M+ P++ ED+ EE +I++ ++ + ++ D+G + +Q+ +G A+GW G++ Sbjct: 1 MSDPESDKEDSQEEPYEIIETPGARQQDLLRDLMSMDLGNRTTIQQIGIGGATGWFAGYM 60 Query: 301 SMXXXXXXXXXXXXXXXXXXXXSQKGYIDINWDKINKKVDXISDKIEKE----ATGKSP- 465 + GYI+INW K+ K + +S +E+E A G S Sbjct: 61 CKKIGKLTISAIGGGILILQIAHKTGYININWKKVEKDYNKVSRHVEREVYKVAQGNSST 120 Query: 466 -----DWFEKVFVFVKSNSYYSAGFTGGFLFGIA 552 ++F + K N ++GF GGFL G+A Sbjct: 121 EQRIVGTGRQIFDYAKRNMAAASGFAGGFLIGMA 154 >SB_18720| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 61 Score = 29.5 bits (63), Expect = 2.5 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +3 Query: 294 FHFYEDWKSSSCWTWRWSHSSTHCK 368 F F + S S WTW WS T C+ Sbjct: 2 FWFPSSFNSWSPWTWNWSFVGTACR 26 >SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1093 Score = 29.5 bits (63), Expect = 2.5 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%) Frame = +1 Query: 379 YIDI-NWDKINKKVDXISDKIEKEATGKSPDWFEKVFVFVK 498 YI I + +K+ K+ + K +TG +P+W E++F+F K Sbjct: 767 YITILSEEKVEKRKHDRIPENTKTSTGYTPNWTEEIFIFDK 807 >SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25) Length = 803 Score = 28.3 bits (60), Expect = 5.7 Identities = 16/38 (42%), Positives = 22/38 (57%) Frame = +1 Query: 127 NXKSVMAKPKNEDASEEAKKIVDDAKNFIERAIADIGK 240 N K+ AKP + A E+ KK D AKN E+ ++I K Sbjct: 750 NKKAEKAKPPQKAAQEKNKKQSDAAKNKKEQEESEIHK 787 >SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75) Length = 1167 Score = 28.3 bits (60), Expect = 5.7 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +1 Query: 148 KPKNEDASEEAKKIVDDAKNFIERAIADIGKTSA 249 KPK +D+ E KI+ + IE I D+ T++ Sbjct: 244 KPKGDDSEVEKAKIIQTSARLIESEIKDLPTTTS 277 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,461,043 Number of Sequences: 59808 Number of extensions: 223226 Number of successful extensions: 481 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 461 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 479 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1657237625 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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