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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K04
         (651 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_12317| Best HMM Match : No HMM Matches (HMM E-Value=.)              59   3e-09
SB_18720| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.5  
SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   2.5  
SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)                28   5.7  
SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75)              28   5.7  

>SB_12317| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 155

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
 Frame = +1

Query: 142 MAKPKN--EDASEEAKKIVDDA----KNFIERAIA-DIGKTSATKQLILGTASGWITGFI 300
           M+ P++  ED+ EE  +I++      ++ +   ++ D+G  +  +Q+ +G A+GW  G++
Sbjct: 1   MSDPESDKEDSQEEPYEIIETPGARQQDLLRDLMSMDLGNRTTIQQIGIGGATGWFAGYM 60

Query: 301 SMXXXXXXXXXXXXXXXXXXXXSQKGYIDINWDKINKKVDXISDKIEKE----ATGKSP- 465
                                  + GYI+INW K+ K  + +S  +E+E    A G S  
Sbjct: 61  CKKIGKLTISAIGGGILILQIAHKTGYININWKKVEKDYNKVSRHVEREVYKVAQGNSST 120

Query: 466 -----DWFEKVFVFVKSNSYYSAGFTGGFLFGIA 552
                    ++F + K N   ++GF GGFL G+A
Sbjct: 121 EQRIVGTGRQIFDYAKRNMAAASGFAGGFLIGMA 154


>SB_18720| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 61

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 294 FHFYEDWKSSSCWTWRWSHSSTHCK 368
           F F   + S S WTW WS   T C+
Sbjct: 2   FWFPSSFNSWSPWTWNWSFVGTACR 26


>SB_6395| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1093

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 379 YIDI-NWDKINKKVDXISDKIEKEATGKSPDWFEKVFVFVK 498
           YI I + +K+ K+      +  K +TG +P+W E++F+F K
Sbjct: 767 YITILSEEKVEKRKHDRIPENTKTSTGYTPNWTEEIFIFDK 807


>SB_6006| Best HMM Match : Annexin (HMM E-Value=2.4e-25)
          Length = 803

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 16/38 (42%), Positives = 22/38 (57%)
 Frame = +1

Query: 127 NXKSVMAKPKNEDASEEAKKIVDDAKNFIERAIADIGK 240
           N K+  AKP  + A E+ KK  D AKN  E+  ++I K
Sbjct: 750 NKKAEKAKPPQKAAQEKNKKQSDAAKNKKEQEESEIHK 787


>SB_38465| Best HMM Match : Nitrophorin (HMM E-Value=0.75)
          Length = 1167

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = +1

Query: 148 KPKNEDASEEAKKIVDDAKNFIERAIADIGKTSA 249
           KPK +D+  E  KI+  +   IE  I D+  T++
Sbjct: 244 KPKGDDSEVEKAKIIQTSARLIESEIKDLPTTTS 277


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,461,043
Number of Sequences: 59808
Number of extensions: 223226
Number of successful extensions: 481
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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