Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K04
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-5|CAA88970.1|  138|Caenorhabditis elegans Hypothetical pr...    44   1e-04

>Z49130-5|CAA88970.1|  138|Caenorhabditis elegans Hypothetical
           protein T06D8.7 protein.
          Length = 138

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 32/133 (24%), Positives = 50/133 (37%)
 Frame = +1

Query: 154 KNEDASEEAKKIVDDAKNFIERAIADIGKTSATKQLILGTASGWITGFISMXXXXXXXXX 333
           KN+  S +A K V DA + +   + D+ K     QL +G   G +TG+            
Sbjct: 6   KNDGGSGKAGKGVSDAIDTVLYYVVDLKKQQPMVQLGVGAGFGTVTGYFVTKGGRLVAAT 65

Query: 334 XXXXXXXXXXXSQKGYIDINWDKINKKVDXISDKIEKEATGKSPDWFEKVFVFVKSNSYY 513
                        KGYI +N  KI + +  +   +  + +GK          FV    + 
Sbjct: 66  VGISFLLAQFAIHKGYITLNESKIERDMKNLHKSVMNKVSGKKV--INISDSFVSEYRWI 123

Query: 514 SAGFTGGFLFGIA 552
             GF  G L G +
Sbjct: 124 LGGFAAGMLIGFS 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,305,307
Number of Sequences: 27780
Number of extensions: 188607
Number of successful extensions: 511
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)