Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_K01
(361 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212; Eukar... 166 1e-40
UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6; Eukar... 138 2e-32
UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorc... 135 2e-31
UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2; ... 129 1e-29
UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24, puta... 108 2e-23
UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3; ... 107 4e-23
UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containin... 103 7e-22
UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1; Ostreoc... 101 4e-21
UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6; Eukaryo... 101 5e-21
UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3; Trichom... 95 2e-19
UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4; Leishm... 93 1e-18
UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132, w... 87 7e-17
UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillar... 78 4e-14
UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal pr... 64 7e-10
UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1; Encepha... 62 3e-09
UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 62 3e-09
UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1; Staphy... 59 3e-08
UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1; Thermo... 54 6e-07
UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=... 53 1e-06
UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1; Methan... 52 3e-06
UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4; Pyroba... 52 4e-06
UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2; Desulf... 51 7e-06
UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1; Archae... 50 1e-05
UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1; Nanoar... 50 2e-05
UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3; Methan... 49 2e-05
UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1; Caldiv... 46 2e-04
UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5; Euryar... 46 3e-04
UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3; Sulfol... 44 6e-04
UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4; Thermo... 43 0.002
UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1; ... 42 0.003
UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6; Haloba... 42 0.004
UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1; Methan... 38 0.053
UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1; Methan... 38 0.070
UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1; Candid... 37 0.12
UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2; Methanomic... 36 0.21
UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gamb... 34 0.86
UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1; ... 34 0.86
UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease c... 31 4.6
UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain pro... 31 4.6
UniRef50_Q6R7H7 Cluster: ORF47; n=1; Ostreid herpesvirus 1|Rep: ... 31 6.1
UniRef50_Q4JB69 Cluster: Conserved Crenarchaeal membrane protein... 31 6.1
UniRef50_Q00TL1 Cluster: Chromosome 17 contig 1, DNA sequence; n... 31 8.0
UniRef50_O43300 Cluster: Leucine-rich repeat transmembrane neuro... 31 8.0
>UniRef50_P62847 Cluster: 40S ribosomal protein S24; n=212;
Eukaryota|Rep: 40S ribosomal protein S24 - Homo sapiens
(Human)
Length = 133
Score = 166 bits (403), Expect = 1e-40
Identities = 77/93 (82%), Positives = 82/93 (88%)
Frame = +2
Query: 83 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4 TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63
Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96
>UniRef50_Q8LC83 Cluster: 40S ribosomal protein S24-2; n=6;
Eukaryota|Rep: 40S ribosomal protein S24-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 138 bits (335), Expect = 2e-32
Identities = 65/98 (66%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = +2
Query: 71 MSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVF 247
M+E TIRTR FMTNRLLARKQ V DVLHPG+ VSK E++EKLA+MY+V P+ F F
Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCF 60
Query: 248 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
F+T+FGGGKS+G+ LIYDT++ AKKFEPK+RL R+GL
Sbjct: 61 KFRTHFGGGKSSGYGLIYDTVENAKKFEPKYRLIRNGL 98
>UniRef50_Q8MUB8 Cluster: 40S ribosomal protein S24; n=1; Clonorchis
sinensis|Rep: 40S ribosomal protein S24 - Clonorchis
sinensis
Length = 139
Score = 135 bits (327), Expect = 2e-31
Identities = 60/87 (68%), Positives = 75/87 (86%)
Frame = +2
Query: 92 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGG 271
IRTRKFM+NRLL R+QMV D+LHPG+ +S +IRE+LAK YK +PD+ F FGF+T+FGG
Sbjct: 7 IRTRKFMSNRLLFRRQMVVDILHPGRCVLSLKDIRERLAKTYKTSPDMVFAFGFRTHFGG 66
Query: 272 GKSTGFALIYDTLDLAKKFEPKHRLXR 352
GKSTGFAL+YD+LD AKKFEP++RL R
Sbjct: 67 GKSTGFALVYDSLDHAKKFEPRYRLIR 93
>UniRef50_A3BCP7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 129 bits (312), Expect = 1e-29
Identities = 60/89 (67%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
Frame = +2
Query: 89 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVFGFKTNF 265
T+RTRKFMTNRLL+RKQ V +VLHPG+ VSK +++EKLAK+Y+V + FVF F+T+F
Sbjct: 11 TLRTRKFMTNRLLSRKQFVLEVLHPGRANVSKADLKEKLAKLYEVKDSNCIFVFKFRTHF 70
Query: 266 GGGKSTGFALIYDTLDLAKKFEPKHRLXR 352
GGGKSTGF LIYD LD AKK+EPK+RL R
Sbjct: 71 GGGKSTGFGLIYDNLDAAKKYEPKYRLIR 99
>UniRef50_Q8I3R6 Cluster: 40S ribosomal subunit protein S24,
putative; n=1; Plasmodium falciparum 3D7|Rep: 40S
ribosomal subunit protein S24, putative - Plasmodium
falciparum (isolate 3D7)
Length = 133
Score = 108 bits (260), Expect = 2e-23
Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 1/92 (1%)
Frame = +2
Query: 89 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVFGFKTNF 265
TIR +K+M+N LL RKQ ++LHP K +V+K E++E+LAKMYK+ + +FGFKT F
Sbjct: 6 TIRVKKYMSNPLLRRKQFALEILHPNKGSVAKKEVKERLAKMYKLNNVNTIVLFGFKTLF 65
Query: 266 GGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
GGG++ GF LIY +D KKFE K+RL R GL
Sbjct: 66 GGGRTKGFGLIYKNVDAVKKFEKKYRLVREGL 97
>UniRef50_UPI0000498B4B Cluster: 40S ribosomal protein S24; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S24 - Entamoeba histolytica HM-1:IMSS
Length = 140
Score = 107 bits (258), Expect = 4e-23
Identities = 55/92 (59%), Positives = 63/92 (68%), Gaps = 1/92 (1%)
Frame = +2
Query: 89 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVF-GFKTNF 265
TIRTR + N LL RKQ+V D+ HPG TEI+EKLAKMYKV V GF T +
Sbjct: 9 TIRTRNLIVNPLLCRKQVVVDIYHPGIVQPKFTEIKEKLAKMYKVKDVQTIVLNGFVTKY 68
Query: 266 GGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
GGGK++GFALIYDTL KKF PKH+L R GL
Sbjct: 69 GGGKTSGFALIYDTLSALKKFVPKHQLIRAGL 100
>UniRef50_UPI000150A155 Cluster: Ribosomal protein S24e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S24e containing protein - Tetrahymena
thermophila SB210
Length = 149
Score = 103 bits (248), Expect = 7e-22
Identities = 48/90 (53%), Positives = 61/90 (67%)
Frame = +2
Query: 83 TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
T IRT+K + N LL+R+Q+ DVLHP PT SK +IRE+LAK KV V+GF T
Sbjct: 2 TIVIRTKKILVNPLLSRRQLSLDVLHPDSPTASKEKIREELAKQLKVDARNVVVYGFSTQ 61
Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXR 352
+GGGKSTGFAL+YD K+EP +RL +
Sbjct: 62 YGGGKSTGFALVYDNQQYLLKYEPNYRLRK 91
>UniRef50_Q00V00 Cluster: 40S ribosomal protein S24; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S24 -
Ostreococcus tauri
Length = 134
Score = 101 bits (242), Expect = 4e-21
Identities = 57/104 (54%), Positives = 67/104 (64%), Gaps = 20/104 (19%)
Frame = +2
Query: 110 MTNRLLARKQMV-----------CDVLHPGKPTVSK--------TEIREKLAKMYKVTPD 232
MTNRLL R+Q V CDVLHPG+ VSK E++EK+AKMY V+ +
Sbjct: 1 MTNRLLQRRQFVRLTNVFHQSQICDVLHPGRANVSKVRYIRGAGAELQEKIAKMYNVSDE 60
Query: 233 -VXFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
+FGF+T FGGGKSTGF LIYD +D KKFEPKHRL R GL
Sbjct: 61 KCVSIFGFRTAFGGGKSTGFGLIYDNIDAFKKFEPKHRLIRAGL 104
>UniRef50_Q5CPN5 Cluster: 40s ribosomal protein s24; n=6;
Eukaryota|Rep: 40s ribosomal protein s24 -
Cryptosporidium parvum Iowa II
Length = 159
Score = 101 bits (241), Expect = 5e-21
Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Frame = +2
Query: 89 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKV-TPDVXFVFGFKTNF 265
T+R R+F+ N LLARKQ V DV+HP VSK++++ KLAK+YKV + +FGFKT F
Sbjct: 33 TVRVRQFLNNPLLARKQFVVDVIHPSLGGVSKSDLKAKLAKLYKVQDANCIVLFGFKTAF 92
Query: 266 GGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
GGG+S+GF +IY+ + KKFE ++R R G+
Sbjct: 93 GGGRSSGFCVIYNNISALKKFEHRYRQVRMGI 124
>UniRef50_A2F0H5 Cluster: 40S ribosomal protein S24; n=3;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S24
- Trichomonas vaginalis G3
Length = 140
Score = 95.5 bits (227), Expect = 2e-19
Identities = 41/91 (45%), Positives = 60/91 (65%)
Frame = +2
Query: 89 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFG 268
++ RK++ N+LL RKQ V D+ H G ++ EI++++A K D+ +FG +T FG
Sbjct: 5 SVHIRKYIVNKLLDRKQFVIDMQHLGAKAPTRDEIKDEVASRLKANKDLVVIFGLETKFG 64
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
GG +TGF +YD+LD KK EPKHRL + GL
Sbjct: 65 GGHTTGFGFVYDSLDALKKTEPKHRLIKAGL 95
>UniRef50_Q4Q1D2 Cluster: 40S ribosomal protein S24e; n=4;
Leishmania|Rep: 40S ribosomal protein S24e - Leishmania
major
Length = 137
Score = 93.1 bits (221), Expect = 1e-18
Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Frame = +2
Query: 65 FKMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGK-PTVSKTEIREKLAKMYKVTPDVXF 241
F+ + IRT +F N+LL RKQ + +V HP TV IR+KLA +YKV PD
Sbjct: 3 FQKKKAEVCIRTSQFKVNKLLNRKQFIVEVNHPHWCGTVPTQLIRKKLATLYKV-PDASQ 61
Query: 242 V--FGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLXRHG 358
V FGFKT FGGGK+TGF LIYD L K+FEP +R R G
Sbjct: 62 VSLFGFKTKFGGGKTTGFGLIYDDLASLKRFEPNYRKTRMG 102
>UniRef50_A0BWM9 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 182
Score = 87.4 bits (207), Expect = 7e-17
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +2
Query: 83 TATIRTRKFMTNRLLA-RKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKT 259
T ++TRK + + L R+Q+ ++LHP KPT S+ + ++LA YK V+G +T
Sbjct: 34 TFIVKTRKVLLKQSLEIRRQLSVELLHPNKPTPSQESVVKELASKYKADERNVVVYGLRT 93
Query: 260 NFGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
FGG ++TGFALIYDT KFEPK RL R G+
Sbjct: 94 TFGGNRTTGFALIYDTQQYLLKFEPKFRLRRRGI 127
>UniRef50_Q9AW51 Cluster: 40S ribosomal protein S24; n=1; Guillardia
theta|Rep: 40S ribosomal protein S24 - Guillardia theta
(Cryptomonas phi)
Length = 129
Score = 78.2 bits (184), Expect = 4e-14
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 92 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVXFVFGFKTNFG 268
++T+KF N LL RKQ + + K +SK +R +L+K Y++ P + F+FG K NFG
Sbjct: 10 LKTKKFKNNPLLKRKQFLLSIDRKKKFNISKEWLRIELSKYYRIKDPSLIFIFGLKNNFG 69
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
G K + F IY L+ A+ EPKHRL ++ L
Sbjct: 70 GFKCSAFVYIYYNLEAARVNEPKHRLIKNNL 100
>UniRef50_Q91834 Cluster: Fragment of Xenopus laevis ribosomal
protein S19; n=1; Xenopus laevis|Rep: Fragment of
Xenopus laevis ribosomal protein S19 - Xenopus laevis
(African clawed frog)
Length = 142
Score = 64.1 bits (149), Expect = 7e-10
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = -1
Query: 361 KAVAG*PVLGLELLGQIECVVDQSESS*LATSEVCLETEYEXYIGSNLVHFGELLTDLGL 182
K + G V L L ++ VVD +++ ATS+V +T+++ I LVH +L +D L
Sbjct: 40 KPMLGKSVFRLILFCIVKRVVDHAKACSFATSKVSPKTKHKNNIWGCLVHLCQLFSDFSL 99
Query: 181 ADGWFSWM*NIANHLLARQQSVGHELASANSRC 83
D F+WM I +HLLA Q+SV H+L+ ++S C
Sbjct: 100 GDSSFAWMKYINDHLLALQKSVCHKLSCSDSHC 132
>UniRef50_Q8SR06 Cluster: 40S RIBOSOMAL PROTEIN S24; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S24
- Encephalitozoon cuniculi
Length = 126
Score = 62.1 bits (144), Expect = 3e-09
Identities = 29/75 (38%), Positives = 44/75 (58%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
NRLL+RK++ HPG P SK EIREK++++Y+ D V K +G ++T A
Sbjct: 8 NRLLSRKELDVVAYHPGMPIPSKEEIREKISELYQTKKDNVVVMDLKNRYGTHRTTLKAK 67
Query: 296 IYDTLDLAKKFEPKH 340
IY ++++ E KH
Sbjct: 68 IYSSIEVLSNIEKKH 82
>UniRef50_Q9UY20 Cluster: 30S ribosomal protein S24e; n=4;
Thermococcaceae|Rep: 30S ribosomal protein S24e -
Pyrococcus abyssi
Length = 99
Score = 62.1 bits (144), Expect = 3e-09
Identities = 28/90 (31%), Positives = 50/90 (55%)
Frame = +2
Query: 92 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGG 271
I+ + N+L+ RK++ ++ HPG+PT S+ +++ KL M + P+ + ++ FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDLNPETTVIQYIRSYFGS 62
Query: 272 GKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
KS G+A Y D EP++ L R G+
Sbjct: 63 YKSKGYAKYYYDKDRMLYIEPEYILIRDGI 92
>UniRef50_A3DMS7 Cluster: 30S ribosomal protein S24e; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S24e - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 118
Score = 58.8 bits (136), Expect = 3e-08
Identities = 34/96 (35%), Positives = 54/96 (56%)
Frame = +2
Query: 68 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVF 247
K+ E T I K+ N L+ R+++V + H GK T S+ IR + AK+Y V + +V
Sbjct: 6 KIGEFTGEIVVDKY--NPLVKRREVVIRIAHIGKSTPSRGLIRHETAKIYGVEVEKVYVR 63
Query: 248 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLXRH 355
T +G G S IYD+++ AK+FEP + + R+
Sbjct: 64 EINTEYGLGVSNATIHIYDSVERAKQFEPPYVIKRN 99
>UniRef50_A1RXC7 Cluster: 30S ribosomal protein S24e; n=1;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein
S24e - Thermofilum pendens (strain Hrk 5)
Length = 106
Score = 54.4 bits (125), Expect = 6e-07
Identities = 29/92 (31%), Positives = 47/92 (51%)
Frame = +2
Query: 86 ATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNF 265
+++R + N+L+ R++++ ++ H G T S+ ++ E L M V T +
Sbjct: 4 SSLRIIQEKVNKLVGRRELLVEIHHQGSGTPSRRDVAEALRNMLGTGGSAIVVRKLVTRY 63
Query: 266 GGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
G G S IYD+ K FEPKH L R+GL
Sbjct: 64 GQGVSEALIHIYDSDVKMKMFEPKHILRRNGL 95
>UniRef50_A4YIV8 Cluster: Ribosomal protein S24E-like protein; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S24E-like protein - Metallosphaera sedula DSM 5348
Length = 113
Score = 53.2 bits (122), Expect = 1e-06
Identities = 24/79 (30%), Positives = 40/79 (50%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N+++ RK++ V H G PT S+ +IR+ ++ D+ + T +G G S
Sbjct: 23 NKVIGRKEIKIKVYHIGSPTPSRADIRKAISSFIGAKEDLVVIRKINTGYGAGISEATIH 82
Query: 296 IYDTLDLAKKFEPKHRLXR 352
+Y D+ KFEP H + R
Sbjct: 83 VYSEKDVLSKFEPAHLVNR 101
>UniRef50_Q8TVD8 Cluster: 30S ribosomal protein S24e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S24e -
Methanopyrus kandleri
Length = 116
Score = 52.0 bits (119), Expect = 3e-06
Identities = 26/80 (32%), Positives = 44/80 (55%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N LL RK++ V H T K+E+ KLA + V +V + ++ FG ++ G+A
Sbjct: 11 NPLLYRKEVKFVVRHEDSGTPQKSEVLRKLAAILDVDKEVVLIDRMESEFGKRETKGYAK 70
Query: 296 IYDTLDLAKKFEPKHRLXRH 355
IY +++ + EP+H + RH
Sbjct: 71 IYKSMEHLEDIEPEHMVERH 90
>UniRef50_Q8ZV65 Cluster: 30S ribosomal protein S24e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S24e -
Pyrobaculum aerophilum
Length = 121
Score = 51.6 bits (118), Expect = 4e-06
Identities = 25/80 (31%), Positives = 44/80 (55%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N+LLAR++++ + +H T ++ +RE +AK + FV KT FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGIDISNVFVRRIKTEFGRGRSLAEVH 73
Query: 296 IYDTLDLAKKFEPKHRLXRH 355
+Y+ +A+ EP + L R+
Sbjct: 74 VYNDSKIARVIEPLYILARN 93
>UniRef50_Q9YCY0 Cluster: 30S ribosomal protein S24e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S24e -
Aeropyrum pernix
Length = 118
Score = 50.8 bits (116), Expect = 7e-06
Identities = 27/81 (33%), Positives = 46/81 (56%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N L+ R+++V + H KPT + +R+KLA++ V ++ KT +G G S
Sbjct: 28 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGVDIKRIYIRYIKTGYGAGLSKVRVH 87
Query: 296 IYDTLDLAKKFEPKHRLXRHG 358
+YD+ + A FEPK+ + R+G
Sbjct: 88 VYDSPERALSFEPKYIIERNG 108
>UniRef50_O29151 Cluster: 30S ribosomal protein S24e; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S24e -
Archaeoglobus fulgidus
Length = 110
Score = 50.0 bits (114), Expect = 1e-05
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N LL R+++ C + GK T S+ E+R K+A + P+ V KT FG ++ +
Sbjct: 14 NPLLRRREVYCRLSFEGK-TPSRKEVRGKIAGLMNAEPERVVVDYIKTEFGKTEAKCYVK 72
Query: 296 IYDTLDLAKKFEPKHRLXRH 355
IYDT++ +K E +H + R+
Sbjct: 73 IYDTVEDLQKIEEEHIIERN 92
>UniRef50_Q74M50 Cluster: 30S ribosomal protein S24e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S24e -
Nanoarchaeum equitans
Length = 94
Score = 49.6 bits (113), Expect = 2e-05
Identities = 26/82 (31%), Positives = 44/82 (53%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N+L R + + V HP + T ++ E +EK+A+M V + + + +G S +A
Sbjct: 12 NKLFDRTEYIIQVEHPKEKTPTREEAKEKIAEMLNVDKNKLVIKKIVSKYGLPYSFIYAR 71
Query: 296 IYDTLDLAKKFEPKHRLXRHGL 361
+YD +D AK+ E K L R+ L
Sbjct: 72 VYDNIDTAKRVELKQILRRNNL 93
>UniRef50_O26367 Cluster: 30S ribosomal protein S24e; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S24e -
Methanobacterium thermoautotrophicum
Length = 100
Score = 49.2 bits (112), Expect = 2e-05
Identities = 24/80 (30%), Positives = 43/80 (53%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N LL RK++ + L+ G+ T E++ KL M D+ V FG ++TG+A
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDADKDLLVVDKIDQGFGEPRATGYAK 70
Query: 296 IYDTLDLAKKFEPKHRLXRH 355
IY++ + + EP+H + ++
Sbjct: 71 IYESAEKLTEIEPEHVIKKN 90
>UniRef50_A3H8R4 Cluster: 30S ribosomal protein S24e; n=1;
Caldivirga maquilingensis IC-167|Rep: 30S ribosomal
protein S24e - Caldivirga maquilingensis IC-167
Length = 155
Score = 46.4 bits (105), Expect = 2e-04
Identities = 26/85 (30%), Positives = 42/85 (49%)
Frame = +2
Query: 80 GTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKT 259
G ++ + N LL RK++ V H G PT + ++RE+LAK P++ +V T
Sbjct: 36 GKVQVKVIEQFNNPLLQRKEVKAIVYHVGLPTPQRLQLREELAKALGSNPELTYVTHVYT 95
Query: 260 NFGGGKSTGFALIYDTLDLAKKFEP 334
+G G S +Y + A+ EP
Sbjct: 96 QYGVGVSRIEVHVYFDKNTAELVEP 120
>UniRef50_Q8PZ95 Cluster: 30S ribosomal protein S24e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 101
Score = 45.6 bits (103), Expect = 3e-04
Identities = 27/90 (30%), Positives = 48/90 (53%)
Frame = +2
Query: 92 IRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGG 271
I+ K N LL R+++ V + G T S+ ++R KLA M ++ + KT +G
Sbjct: 3 IKIIKDKKNPLLNRRELDFIVKYEGS-TPSRNDVRNKLAAMLNAPLELLVIQRIKTEYGM 61
Query: 272 GKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
+S G+A +Y+ D K+ E ++ L R+ +
Sbjct: 62 QESKGYAKLYEDADRMKQVEQEYVLKRNAV 91
>UniRef50_Q975Q9 Cluster: 30S ribosomal protein S24e; n=3;
Sulfolobus|Rep: 30S ribosomal protein S24e - Sulfolobus
tokodaii
Length = 120
Score = 44.4 bits (100), Expect = 6e-04
Identities = 26/95 (27%), Positives = 48/95 (50%)
Frame = +2
Query: 68 KMSEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVF 247
K+SE I R + N ++ R+++ V H G T+S+ ++ + +A Y D+ +
Sbjct: 10 KISEKAEGIVERD-IKNNVIGRRELYIKVFHIGSGTISRKDMIKAIASSYGAQEDLVVIK 68
Query: 248 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLXR 352
T +G G S A IY+ ++FEP++ + R
Sbjct: 69 KIHTLYGAGISYVRANIYNDKKTLQEFEPQYLIGR 103
>UniRef50_Q6L0P8 Cluster: 30S ribosomal protein S24e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S24e -
Picrophilus torridus
Length = 102
Score = 42.7 bits (96), Expect = 0.002
Identities = 26/82 (31%), Positives = 41/82 (50%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N+LL RK++ + T S+ +IR+ LA Y + V + G + G+A
Sbjct: 14 NKLLFRKEINYTIKFENDKTPSREDIRKLLANNYGSDESLIIVDKNRQETGKHEIKGYAK 73
Query: 296 IYDTLDLAKKFEPKHRLXRHGL 361
IYDT + A +EP + L R+ L
Sbjct: 74 IYDTKEHAMLYEPDYELFRNKL 95
>UniRef50_P34582 Cluster: Uncharacterized protein T26G10.3; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
T26G10.3 - Caenorhabditis elegans
Length = 91
Score = 41.9 bits (94), Expect = 0.003
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 140 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPD 232
MV +V+ PG+PT K +IREK+A Y + PD
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPD 31
>UniRef50_P19953 Cluster: 30S ribosomal protein S24e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S24e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 102
Score = 41.5 bits (93), Expect = 0.004
Identities = 23/80 (28%), Positives = 39/80 (48%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N +L R + +V+H + T S+ +R+ LA + + T FG K+ G+A
Sbjct: 11 NPMLHRTDVRFEVVHD-EATPSRLSVRDSLAATLNKDAEEVVIHKLDTKFGMRKTVGYAK 69
Query: 296 IYDTLDLAKKFEPKHRLXRH 355
+YD + A+ E H L R+
Sbjct: 70 VYDNPEYARDVEQDHMLERN 89
>UniRef50_P54032 Cluster: 30S ribosomal protein S24e; n=1;
Methanocaldococcus jannaschii|Rep: 30S ribosomal protein
S24e - Methanococcus jannaschii
Length = 101
Score = 37.9 bits (84), Expect = 0.053
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N LL RK+ V H G PT + +++ KLA + D+ V G ++ G+A
Sbjct: 11 NPLLKRKEYRFIVDHDG-PTPTFKDVKLKLAAILNANKDLLIVEKIVEEAGMQRARGYAK 69
Query: 296 IYDTLDLAKKFEPKHRLXRH 355
+YD ++ K E +H L ++
Sbjct: 70 LYDNEEMLKLVEREHILRKN 89
>UniRef50_Q2FS46 Cluster: 30S ribosomal protein S24e; n=1;
Methanospirillum hungatei JF-1|Rep: 30S ribosomal
protein S24e - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 112
Score = 37.5 bits (83), Expect = 0.070
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N LL RK++ + G T S+ + KLA M D + FG + TG A
Sbjct: 11 NVLLNRKEIGFSITFTGA-TPSRKMVHAKLAAMLSAPKDQLVIGSLHNRFGLTEITGDAR 69
Query: 296 IYDTLDLAKKFEPKH 340
+Y + + KK EP++
Sbjct: 70 VYTSAEYLKKIEPEY 84
>UniRef50_A7I4V3 Cluster: SSU ribosomal protein S24E; n=1;
Candidatus Methanoregula boonei 6A8|Rep: SSU ribosomal
protein S24E - Methanoregula boonei (strain 6A8)
Length = 99
Score = 36.7 bits (81), Expect = 0.12
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N LL+R+++ + + G T S+ +I KL + + + K+NFG G A
Sbjct: 11 NELLSRREIAFTLTYDGA-TPSRLQIIGKLCALLNTKDPLVVLDSLKSNFGKMVIVGKAR 69
Query: 296 IYDTLDLAKKFE 331
IYD+ D KK E
Sbjct: 70 IYDSEDAKKKTE 81
>UniRef50_A2SR72 Cluster: Ribosomal protein S24e; n=2;
Methanomicrobiales|Rep: Ribosomal protein S24e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 97
Score = 35.9 bits (79), Expect = 0.21
Identities = 23/79 (29%), Positives = 37/79 (46%)
Frame = +2
Query: 116 NRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFAL 295
N LL+R ++ + G T ++++I K+A M + + K FG TG A
Sbjct: 11 NELLSRNELAFTASYDGA-TPARSDIGAKIAAMQNTPVENLILSPLKGRFGTRAVTGVAR 69
Query: 296 IYDTLDLAKKFEPKHRLXR 352
IYDT + K E + + R
Sbjct: 70 IYDTPEALKATEREFLIAR 88
>UniRef50_Q7QAG9 Cluster: ENSANGP00000021262; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000021262 - Anopheles gambiae
str. PEST
Length = 1960
Score = 33.9 bits (74), Expect = 0.86
Identities = 20/73 (27%), Positives = 37/73 (50%)
Frame = -2
Query: 297 IKANPVDLPPPKFVLKPNTNXTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNL 118
+ A V PP+ V KP TN + TL +L F+ + ++ G P K+++ + + N
Sbjct: 1 MSAFEVSCTPPRAVAKPRTNESREPTLVLLGPFTPKATVVFEGVPVGKSARRLLIVRNTN 60
Query: 117 LVMNLRVRIVAVP 79
+ ++V + VP
Sbjct: 61 KTL-VQVNLTRVP 72
>UniRef50_Q1XFY8 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 204
Score = 33.9 bits (74), Expect = 0.86
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 284 GFALIYDTLDLAKKFEPKHRLXRHG 358
GF L+YDT D A K++P+H G
Sbjct: 54 GFTLVYDTFDFANKYQPEHSSNHDG 78
>UniRef50_Q14QN3 Cluster: Hypothetical abc transporter permease
component transmembrane protein; n=1; Spiroplasma
citri|Rep: Hypothetical abc transporter permease
component transmembrane protein - Spiroplasma citri
Length = 1415
Score = 31.5 bits (68), Expect = 4.6
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = +2
Query: 125 LARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGFALIYD 304
L + +V D L+ GK +KT+I K A +Y + +F F G G S YD
Sbjct: 783 LTKNSLVSDYLYNGKWLSTKTDISAKNAHLYAQQLNNMIIFNFMV--GKGASLSIGTFYD 840
>UniRef50_A1ZRP2 Cluster: Von Willebrand factor type A domain protein;
n=1; Microscilla marina ATCC 23134|Rep: Von Willebrand
factor type A domain protein - Microscilla marina ATCC
23134
Length = 1088
Score = 31.5 bits (68), Expect = 4.6
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = -2
Query: 276 LPPPKFVLKPNTNXTSGVTLYILASFSRISVLLTVGFPGCKTSQ 145
LPPPK V+K +TN GV + + F+ +++L + G +S+
Sbjct: 885 LPPPKIVIKTDTNY-QGVNMTSMKGFAHNNLMLLLDVSGSMSSK 927
>UniRef50_Q6R7H7 Cluster: ORF47; n=1; Ostreid herpesvirus 1|Rep:
ORF47 - Ostreid herpesvirus 1
Length = 1412
Score = 31.1 bits (67), Expect = 6.1
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 215 YKVTPDVXFVFGFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLXRHG 358
YK+ P + F G T FG ST L Y L A K + KH + G
Sbjct: 452 YKIRPPIYFTSGSDTQFGSISSTASPLSY-ILSPAIKSDEKHTMVWRG 498
>UniRef50_Q4JB69 Cluster: Conserved Crenarchaeal membrane protein;
n=1; Sulfolobus acidocaldarius|Rep: Conserved
Crenarchaeal membrane protein - Sulfolobus
acidocaldarius
Length = 260
Score = 31.1 bits (67), Expect = 6.1
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = -1
Query: 277 LATSEVCLETEYEXYIGSNLVHFGELLTDLGLA-DGWFSWM*NI 149
L T + + Y+G L+ GELL+ LG+ DG+FSW+ NI
Sbjct: 42 LITDSIYVVVWNSIYLGV-LLFLGELLSLLGVTWDGYFSWLNNI 84
>UniRef50_Q00TL1 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 480
Score = 30.7 bits (66), Expect = 8.0
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = -3
Query: 335 WART--SWPDRVCRRSKRIQLTCHLRSLS*NRIRTXH 231
W RT SW D R + I + CHL L N + + H
Sbjct: 305 WTRTGTSWRDNATSRKQYIGILCHLADLCENHLDSSH 341
>UniRef50_O43300 Cluster: Leucine-rich repeat transmembrane neuronal
protein 2 precursor; n=18; Euteleostomi|Rep:
Leucine-rich repeat transmembrane neuronal protein 2
precursor - Homo sapiens (Human)
Length = 516
Score = 30.7 bits (66), Expect = 8.0
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = -2
Query: 294 KANPVDLPPPKFVLKPNTNXTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 118
K + L K PNT T + L L SF+++S L F G + QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169
Query: 117 LVMNLRV 97
+ +R+
Sbjct: 170 RTIPVRL 176
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 358,355,226
Number of Sequences: 1657284
Number of extensions: 6493285
Number of successful extensions: 16731
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 16388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16708
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 12367962079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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