Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K01
         (361 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   0.49 
SB_11523| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   0.86 
SB_24027| Best HMM Match : FAD_binding_7 (HMM E-Value=0)               28   2.6  
SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)            27   3.5  
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.5  
SB_43942| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.6  
SB_57667| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.1  
SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.1  
SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   8.0  

>SB_34297| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 512

 Score = 30.3 bits (65), Expect = 0.49
 Identities = 17/54 (31%), Positives = 28/54 (51%)
 Frame = -1

Query: 340 VLGLELLGQIECVVDQSESS*LATSEVCLETEYEXYIGSNLVHFGELLTDLGLA 179
           ++GLEL  +I+ ++D++ S        CL +E   +   N   FG LL D+  A
Sbjct: 72  IIGLELAKEIQKLIDEASSGLNIKHAACLPSEVPAF--CNTERFGLLLVDVRCA 123


>SB_11523| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 411

 Score = 29.5 bits (63), Expect = 0.86
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 235 YIGSNLVHFGELLTDLGLADGWFSWM*NIANHLLARQQSVGHELASANS 89
           +I  N  +F   + DLG+A  +   +  + +H L R Q+VGH  A   S
Sbjct: 289 FIDFNDFYFSNRVVDLGIALAYIMMLPQVNSH-LTRPQAVGHMFAGYQS 336


>SB_24027| Best HMM Match : FAD_binding_7 (HMM E-Value=0)
          Length = 1074

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = -1

Query: 211 FGELLTDLGLADGWFSWM*NIANHLLA 131
           FGEL+ D G +   F+W+ N++N +LA
Sbjct: 76  FGELMLDAGWSRNAFNWL-NMSNSMLA 101


>SB_13394| Best HMM Match : Chordopox_A13L (HMM E-Value=3.2)
          Length = 694

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -2

Query: 258 VLKPNTNXTSGVTLYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVM 109
           V+  NT  ++ +T     +F  I +++T     C++S TI +  NN + +
Sbjct: 137 VIINNTIISTKITTSTTTTFIIIIIIITTSSHHCRSSTTIVVTTNNTITI 186


>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1383

 Score = 27.5 bits (58), Expect = 3.5
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
 Frame = +2

Query: 119  RLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKT--NFGGGKSTGFA 292
            ++++ K+   +    G  T+ K  +   + K+ K+T     + GF    +FGGG  +GFA
Sbjct: 1002 QMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFA 1061

Query: 293  -LIYD--TLDLAKK 325
             LI +  ++D  KK
Sbjct: 1062 SLITEHLSVDYGKK 1075


>SB_43942| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 973

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 156 KTSQTICLRANNLLVMN-LRVRIVAVPSLILNYFQ*FGVYTH 34
           K S  + LR +NL   + +  RIV  P   ++Y + FG+Y H
Sbjct: 245 KRSPKMILRLHNLCWRHAMSCRIVPTPPKAISYRKLFGIYFH 286


>SB_57667| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 799

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
 Frame = -2

Query: 156 KTSQTICLRANNLLVMN-LRVRIVAVPSLILNYFQ*FGVYTHVSLLKA 16
           + S  + LR +NL   + +  R V  P   L Y + FG+Y H S+  A
Sbjct: 526 RRSPKMILRLHNLCWHHAILCRTVLTPPTALTYRKLFGIYFHASISHA 573


>SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 251

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 16/68 (23%), Positives = 26/68 (38%)
 Frame = +2

Query: 74  SEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGF 253
           SEG     ++K +   +   KQ   +  +PG     + +   K  K Y++        GF
Sbjct: 158 SEGPPRPTSKKPVLKLVSQEKQPAIEGQNPGTTKEIQNDEEGKATKKYEIPAYAYIELGF 217

Query: 254 KTNFGGGK 277
               G GK
Sbjct: 218 NDEMGSGK 225


>SB_23538| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 501

 Score = 26.2 bits (55), Expect = 8.0
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -2

Query: 219 LYILASFSRISVLLTVGFPGCKTSQTICLRANNLLVMNLRVRIVAVPSLILNYFQ*FGVY 40
           LYI+ S   + VL  +G P C      CL    ++   + V IV V  ++++ +  F +Y
Sbjct: 102 LYIVMSVYIVLVLYVIGVPMCHVMTNDCLPCRYIV---MSVYIVFVLYIVMSVYIVFVLY 158


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,277,685
Number of Sequences: 59808
Number of extensions: 209261
Number of successful extensions: 455
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 572951758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)