Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_K01
         (361 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12202-2|AAB08007.1|  130|Homo sapiens ribosomal protein S24 pro...   166   2e-41
U12202-1|AAB08006.1|  133|Homo sapiens ribosomal protein S24 pro...   166   2e-41
M31520-2|AAA36588.1|  133|Homo sapiens ribosomal protein S24 pro...   166   2e-41
BX537975-1|CAD97939.1|  132|Homo sapiens hypothetical protein pr...   166   2e-41
BC071926-1|AAH71926.1|  130|Homo sapiens ribosomal protein S24 p...   166   2e-41
BC000523-1|AAH00523.1|  130|Homo sapiens ribosomal protein S24 p...   166   2e-41
AL512628-3|CAI16468.1|  133|Homo sapiens ribosomal protein S24 p...   166   2e-41
AL512628-2|CAI16467.1|  130|Homo sapiens ribosomal protein S24 p...   166   2e-41
BC126410-1|AAI26411.1|  516|Homo sapiens leucine rich repeat tra...    31   1.4  
BC126408-1|AAI26409.1|  516|Homo sapiens leucine rich repeat tra...    31   1.4  
AY182026-1|AAO67547.1|  516|Homo sapiens leucine-rich repeat tra...    31   1.4  
AB007876-1|BAA24846.2|  529|Homo sapiens KIAA0416 protein.             31   1.4  

>U12202-2|AAB08007.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>U12202-1|AAB08006.1|  133|Homo sapiens ribosomal protein S24
           protein.
          Length = 133

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>M31520-2|AAA36588.1|  133|Homo sapiens ribosomal protein S24
           protein.
          Length = 133

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>BX537975-1|CAD97939.1|  132|Homo sapiens hypothetical protein
           protein.
          Length = 132

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>BC071926-1|AAH71926.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>BC000523-1|AAH00523.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>AL512628-3|CAI16468.1|  133|Homo sapiens ribosomal protein S24
           protein.
          Length = 133

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>AL512628-2|CAI16467.1|  130|Homo sapiens ribosomal protein S24
           protein.
          Length = 130

 Score =  166 bits (403), Expect = 2e-41
 Identities = 77/93 (82%), Positives = 82/93 (88%)
 Frame = +2

Query: 83  TATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTN 262
           T TIRTRKFMTNRLL RKQMV DVLHPGK TV KTEIREKLAKMYK TPDV FVFGF+T+
Sbjct: 4   TVTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTTPDVIFVFGFRTH 63

Query: 263 FGGGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
           FGGGK+TGF +IYD+LD AKK EPKHRL RHGL
Sbjct: 64  FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGL 96


>BC126410-1|AAI26411.1|  516|Homo sapiens leucine rich repeat
           transmembrane neuronal 2 protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -2

Query: 294 KANPVDLPPPKFVLKPNTNXTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 118
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169

Query: 117 LVMNLRV 97
             + +R+
Sbjct: 170 RTIPVRL 176


>BC126408-1|AAI26409.1|  516|Homo sapiens leucine rich repeat
           transmembrane neuronal 2 protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -2

Query: 294 KANPVDLPPPKFVLKPNTNXTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 118
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169

Query: 117 LVMNLRV 97
             + +R+
Sbjct: 170 RTIPVRL 176


>AY182026-1|AAO67547.1|  516|Homo sapiens leucine-rich repeat
           transmembrane neuronal 2 protein protein.
          Length = 516

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -2

Query: 294 KANPVDLPPPKFVLKPNTNXTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 118
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 110 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 169

Query: 117 LVMNLRV 97
             + +R+
Sbjct: 170 RTIPVRL 176


>AB007876-1|BAA24846.2|  529|Homo sapiens KIAA0416 protein.
          Length = 529

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
 Frame = -2

Query: 294 KANPVDLPPPKFVLKPNTNXTSGVTLYIL-ASFSRISVLLTVGFPGCKTSQTICLRANNL 118
           K   + L   K    PNT  T  + L  L  SF+++S L    F G +  QT+ LR+N+L
Sbjct: 123 KLKELILSSNKIFYLPNTTFTQLINLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSL 182

Query: 117 LVMNLRV 97
             + +R+
Sbjct: 183 RTIPVRL 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,173,211
Number of Sequences: 237096
Number of extensions: 959116
Number of successful extensions: 2616
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2616
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)