Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_K01
(361 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 140 3e-34
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 42 1e-04
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 34 0.034
Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical pr... 29 0.98
AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein sig... 29 0.98
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 28 1.7
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 28 1.7
U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine rece... 28 2.3
U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine rece... 27 3.9
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr... 27 5.2
AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical... 27 5.2
Z81513-3|CAB04185.3| 476|Caenorhabditis elegans Hypothetical pr... 26 6.9
U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chlor... 26 6.9
U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chlor... 26 6.9
U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical p... 26 6.9
AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type chlo... 26 6.9
U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical pr... 26 9.1
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 140 bits (339), Expect = 3e-34
Identities = 62/91 (68%), Positives = 75/91 (82%)
Frame = +2
Query: 89 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFG 268
TIRTRK +TN+LL RKQMV +V+HPG+PTV K +IREK+AK+YK TPD FGF++ G
Sbjct: 6 TIRTRKVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGFESKIG 65
Query: 269 GGKSTGFALIYDTLDLAKKFEPKHRLXRHGL 361
GGKS GFAL+YDT+D AKKFEPK+RL R GL
Sbjct: 66 GGKSKGFALVYDTIDFAKKFEPKYRLVRMGL 96
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 41.9 bits (94), Expect = 1e-04
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 140 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPD 232
MV +V+ PG+PT K +IREK+A Y + PD
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPD 31
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 33.9 bits (74), Expect = 0.034
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 284 GFALIYDTLDLAKKFEPKHRLXRHG 358
GF L+YDT D A K++P+H G
Sbjct: 54 GFTLVYDTFDFANKYQPEHSSNHDG 78
>Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical
protein C16C2.2b protein.
Length = 431
Score = 29.1 bits (62), Expect = 0.98
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 205 RQNVQGYSRCXV-RIRFQDKLRRWQVNWIRFDLRHTRSGQEVRAQAQVXPPRP 360
RQN QGY RC + R+RF K + W D T Q + PP+P
Sbjct: 201 RQNAQGY-RCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 252
>Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical
protein C16C2.2a protein.
Length = 473
Score = 29.1 bits (62), Expect = 0.98
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 205 RQNVQGYSRCXV-RIRFQDKLRRWQVNWIRFDLRHTRSGQEVRAQAQVXPPRP 360
RQN QGY RC + R+RF K + W D T Q + PP+P
Sbjct: 201 RQNAQGY-RCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 252
>AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein
signaling regulator EAT-16 protein.
Length = 103
Score = 29.1 bits (62), Expect = 0.98
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +1
Query: 205 RQNVQGYSRCXV-RIRFQDKLRRWQVNWIRFDLRHTRSGQEVRAQAQVXPPRP 360
RQN QGY RC + R+RF K + W D T Q + PP+P
Sbjct: 1 RQNAQGY-RCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 52
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 328 ELLGQIECVVDQSESS*LATSEVCLETEYEXYIGSNLVHFGELLTD 191
+LL IE VVD+ + + S+ C +E + ++G N+VH L+D
Sbjct: 1077 DLLSGIERVVDEWKVAECGISDQCNASENQVFVG-NVVHVVSQLSD 1121
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 328 ELLGQIECVVDQSESS*LATSEVCLETEYEXYIGSNLVHFGELLTD 191
+LL IE VVD+ + + S+ C +E + ++G N+VH L+D
Sbjct: 1077 DLLSGIERVVDEWKVAECGISDQCNASENQVFVG-NVVHVVSQLSD 1121
>U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine
receptor, class x protein74 protein.
Length = 323
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -2
Query: 201 FSRISVLLTV-GFPGCKTSQTICL-RA-NNLLVMNLRVRIVAVPSLILNY 61
FS + V L V GF + ICL RA NN++V+ + I P+L+L+Y
Sbjct: 22 FSSLIVYLYVSGFAEKTSFNVICLVRAVNNIIVLVVNFLIFLFPTLLLSY 71
>U55366-8|AAZ91347.1| 287|Caenorhabditis elegans Serpentine
receptor, class x protein73 protein.
Length = 287
Score = 27.1 bits (57), Expect = 3.9
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Frame = -2
Query: 156 KTS-QTICL-RA-NNLLVMNLRVRIVAVPSLILNY 61
KTS ICL RA NN++V+ ++ PSL+L+Y
Sbjct: 4 KTSFNVICLTRAVNNIIVLVFNFLVITFPSLLLSY 38
>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical
protein F42C5.10 protein.
Length = 1292
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = -1
Query: 154 NIANHLLARQQSVGHELASANSRCSFTHFELFSI 53
N NH+L++ + V H ++ ANSR + E+ +I
Sbjct: 784 NEENHILSQTRPVSHPVSRANSRPTTPGLEIKTI 817
>AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical
protein R07C3.3 protein.
Length = 470
Score = 26.6 bits (56), Expect = 5.2
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +1
Query: 25 QRHVRVDAELLKIIQNE*RNSDY 93
++H++ D + LK+ +N+ +NSDY
Sbjct: 260 KKHLKWDLKSLKLFRNDSKNSDY 282
>Z81513-3|CAB04185.3| 476|Caenorhabditis elegans Hypothetical
protein F26D2.3a protein.
Length = 476
Score = 26.2 bits (55), Expect = 6.9
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 28 RHVRVDAELLKIIQNE*RNSDY 93
+H + D + L++ +NE RNSDY
Sbjct: 266 KHSKWDLKSLRLFRNESRNSDY 287
>U41551-5|AAK77627.2| 1050|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform a protein.
Length = 1050
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 23 SRDTCV*TPNY*K*FKMSEGTATIRTRKFMTNRLLARKQMVCDV-LHPGK 169
S D C+ +P + K S +A +RT F + + K+M+ D+ PGK
Sbjct: 37 SDDNCIVSPRF---RKSSSRSALVRTTSFNHKQYRSIKEMIIDLKQEPGK 83
>U41551-4|AAK77628.1| 1085|Caenorhabditis elegans Clc-type chloride
channel protein4, isoform b protein.
Length = 1085
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 23 SRDTCV*TPNY*K*FKMSEGTATIRTRKFMTNRLLARKQMVCDV-LHPGK 169
S D C+ +P + K S +A +RT F + + K+M+ D+ PGK
Sbjct: 37 SDDNCIVSPRF---RKSSSRSALVRTTSFNHKQYRSIKEMIIDLKQEPGK 83
>U10438-14|ABB88242.1| 441|Caenorhabditis elegans Hypothetical
protein B0280.11 protein.
Length = 441
Score = 26.2 bits (55), Expect = 6.9
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 143 VCDVLHPGK-PTVSKTEIREKLAKMYKVTPDVXFVFGFKTNFGGGKSTGF 289
+CD GK PTVS I A ++ D +N+G G++ F
Sbjct: 302 ICDFWPDGKIPTVSYGRIAATAASVFDSDIDSDATCAIVSNYGAGRAGSF 351
>AF319615-1|AAG49525.1| 1084|Caenorhabditis elegans CLC-type
chloride channel CLH-4b protein.
Length = 1084
Score = 26.2 bits (55), Expect = 6.9
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 23 SRDTCV*TPNY*K*FKMSEGTATIRTRKFMTNRLLARKQMVCDV-LHPGK 169
S D C+ +P + K S +A +RT F + + K+M+ D+ PGK
Sbjct: 37 SDDNCIVSPRF---RKSSSRSALVRTTSFNHKQYRSIKEMIIDLKQEPGK 83
>U97549-9|AAB52849.2| 472|Caenorhabditis elegans Hypothetical
protein F15A8.7 protein.
Length = 472
Score = 25.8 bits (54), Expect = 9.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 86 ATIRTRKFMTNRLLARKQMVCDVLHPG 166
A + T +F+ R+L+ + +V DVL PG
Sbjct: 336 AEVLTPRFLEPRVLSPEALVIDVLSPG 362
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,203,718
Number of Sequences: 27780
Number of extensions: 153911
Number of successful extensions: 407
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 407
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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