Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J24
         (541 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC008305-1|AAH08305.2|  657|Homo sapiens chromosome 18 open read...   107   2e-23
BC002950-1|AAH02950.2|  657|Homo sapiens chromosome 18 open read...   107   2e-23
AK057192-1|BAB71377.1|  657|Homo sapiens  gene).  protein.            107   2e-23
AF143536-1|AAD33909.1|  609|Homo sapiens colon cancer-associated...    67   4e-11
Z83067-1|CAB05445.1| 1455|Homo sapiens FAA protein.                    31   3.4  
X99226-1|CAA67610.1| 1455|Homo sapiens Fanconi anemia complement...    31   3.4  
AY598423-1|AAS99350.1| 1429|Homo sapiens Fanconi anemia, complem...    31   3.4  
AC005360-1|AAC28751.1|  846|Homo sapiens FAA protein.                  31   3.4  
BC000322-1|AAH00322.1| 1193|Homo sapiens sperm associated antige...    29   7.9  
AF399910-1|AAK91712.1| 1193|Homo sapiens mitotic spindle associa...    29   7.9  
AF345347-1|AAL06396.2| 1135|Homo sapiens mitotic spindle-associa...    29   7.9  
AF063308-1|AAD02813.1| 1120|Homo sapiens coiled-coil related pro...    29   7.9  

>BC008305-1|AAH08305.2|  657|Homo sapiens chromosome 18 open reading
           frame 8 protein.
          Length = 657

 Score =  107 bits (257), Expect = 2e-23
 Identities = 58/112 (51%), Positives = 68/112 (60%)
 Frame = +3

Query: 204 VFFDDTNGQVFTVRSGGIGGVTVNSMDDRKCTSFQMEDKGPIISIKLSPDXXILAIQRNH 383
           VFFD+ N QVF VRSGG  GV V   DDR   SF+M+DKG +  IK S +  ILA+QR  
Sbjct: 26  VFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRT- 84

Query: 384 XSQSAAVEFVNFKDMSPTNVEYSHSCKWKNAKILRFVWPKSNEIAFITDHGI 539
              S  V+F NF     + +EY+  CK KNA IL F W  S EI FITD GI
Sbjct: 85  ---SKTVDFCNFIP-DNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGI 132


>BC002950-1|AAH02950.2|  657|Homo sapiens chromosome 18 open reading
           frame 8 protein.
          Length = 657

 Score =  107 bits (257), Expect = 2e-23
 Identities = 58/112 (51%), Positives = 68/112 (60%)
 Frame = +3

Query: 204 VFFDDTNGQVFTVRSGGIGGVTVNSMDDRKCTSFQMEDKGPIISIKLSPDXXILAIQRNH 383
           VFFD+ N QVF VRSGG  GV V   DDR   SF+M+DKG +  IK S +  ILA+QR  
Sbjct: 26  VFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRT- 84

Query: 384 XSQSAAVEFVNFKDMSPTNVEYSHSCKWKNAKILRFVWPKSNEIAFITDHGI 539
              S  V+F NF     + +EY+  CK KNA IL F W  S EI FITD GI
Sbjct: 85  ---SKTVDFCNFIP-DNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGI 132


>AK057192-1|BAB71377.1|  657|Homo sapiens  gene).  protein.
          Length = 657

 Score =  107 bits (257), Expect = 2e-23
 Identities = 58/112 (51%), Positives = 68/112 (60%)
 Frame = +3

Query: 204 VFFDDTNGQVFTVRSGGIGGVTVNSMDDRKCTSFQMEDKGPIISIKLSPDXXILAIQRNH 383
           VFFD+ N QVF VRSGG  GV V   DDR   SF+M+DKG +  IK S +  ILA+QR  
Sbjct: 26  VFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCIKFSLENKILAVQRT- 84

Query: 384 XSQSAAVEFVNFKDMSPTNVEYSHSCKWKNAKILRFVWPKSNEIAFITDHGI 539
              S  V+F NF     + +EY+  CK KNA IL F W  S EI FITD GI
Sbjct: 85  ---SKTVDFCNFIP-DNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGI 132


>AF143536-1|AAD33909.1|  609|Homo sapiens colon cancer-associated
           protein Mic1 protein.
          Length = 609

 Score = 66.9 bits (156), Expect = 4e-11
 Identities = 37/77 (48%), Positives = 46/77 (59%)
 Frame = +3

Query: 309 MEDKGPIISIKLSPDXXILAIQRNHXSQSAAVEFVNFKDMSPTNVEYSHSCKWKNAKILR 488
           M+DKG +  IK S +  ILA+QR     S  V+F NF   + + +EY+  CK KNA IL 
Sbjct: 1   MDDKGEVKCIKFSLENKILAVQRT----SKTVDFCNFIPDN-SQLEYTQECKTKNANILG 55

Query: 489 FVWPKSNEIAFITDHGI 539
           F W  S EI FITD GI
Sbjct: 56  FCWTSSTEIVFITDQGI 72


>Z83067-1|CAB05445.1| 1455|Homo sapiens FAA protein.
          Length = 1455

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 323 SFVFHLERCTLSIIHTVYGYASDSTRTYCEYLSISVVKKY 204
           S  F L+ CT +I +++  ++S S  T C  LS  ++KK+
Sbjct: 829 SLFFCLKFCTAAISYSLCKFSSQSRDTLCSCLSPGLIKKF 868


>X99226-1|CAA67610.1| 1455|Homo sapiens Fanconi anemia
           complementation group A protein protein.
          Length = 1455

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 323 SFVFHLERCTLSIIHTVYGYASDSTRTYCEYLSISVVKKY 204
           S  F L+ CT +I +++  ++S S  T C  LS  ++KK+
Sbjct: 829 SLFFCLKFCTAAISYSLCKFSSQSRDTLCSCLSPGLIKKF 868


>AY598423-1|AAS99350.1| 1429|Homo sapiens Fanconi anemia,
           complementation group A protein.
          Length = 1429

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 323 SFVFHLERCTLSIIHTVYGYASDSTRTYCEYLSISVVKKY 204
           S  F L+ CT +I +++  ++S S  T C  LS  ++KK+
Sbjct: 803 SLFFCLKFCTAAISYSLCKFSSQSRDTLCSCLSPGLIKKF 842


>AC005360-1|AAC28751.1|  846|Homo sapiens FAA protein.
          Length = 846

 Score = 30.7 bits (66), Expect = 3.4
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -3

Query: 323 SFVFHLERCTLSIIHTVYGYASDSTRTYCEYLSISVVKKY 204
           S  F L+ CT +I +++  ++S S  T C  LS  ++KK+
Sbjct: 220 SLFFCLKFCTAAISYSLCKFSSQSRDTLCSCLSPGLIKKF 259


>BC000322-1|AAH00322.1| 1193|Homo sapiens sperm associated antigen 5
           protein.
          Length = 1193

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 342 LSPDXXILAIQRNHXSQSAAVEFVNFKDMSPTNVEYSHSCKW 467
           L+P    L +Q    + S+ V+FVN K    ++  +SHS KW
Sbjct: 49  LTPSLCKLGLQEG-SNNSSPVDFVNNKRTDLSSEHFSHSSKW 89


>AF399910-1|AAK91712.1| 1193|Homo sapiens mitotic spindle associated
           protein protein.
          Length = 1193

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 342 LSPDXXILAIQRNHXSQSAAVEFVNFKDMSPTNVEYSHSCKW 467
           L+P    L +Q    + S+ V+FVN K    ++  +SHS KW
Sbjct: 49  LTPSLCKLGLQEG-SNNSSPVDFVNNKRTDLSSEHFSHSSKW 89


>AF345347-1|AAL06396.2| 1135|Homo sapiens mitotic spindle-associated
           protein p126 protein.
          Length = 1135

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 342 LSPDXXILAIQRNHXSQSAAVEFVNFKDMSPTNVEYSHSCKW 467
           L+P    L +Q    + S+ V+FVN K    ++  +SHS KW
Sbjct: 49  LTPSLCKLGLQEG-SNNSSPVDFVNNKRTDLSSEHFSHSSKW 89


>AF063308-1|AAD02813.1| 1120|Homo sapiens coiled-coil related
           protein DEEPEST protein.
          Length = 1120

 Score = 29.5 bits (63), Expect = 7.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +3

Query: 342 LSPDXXILAIQRNHXSQSAAVEFVNFKDMSPTNVEYSHSCKW 467
           L+P    L +Q    + S+ V+FVN K    ++  +SHS KW
Sbjct: 49  LTPSLCKLGLQEG-SNNSSPVDFVNNKRTDLSSEHFSHSSKW 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,859,186
Number of Sequences: 237096
Number of extensions: 1390554
Number of successful extensions: 2272
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2268
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5251598958
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)