Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J22
(569 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 27 1.5
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 1.9
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 2.6
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 2.6
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 27 2.6
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 26 3.4
SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces p... 26 4.5
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 26 4.5
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 5.9
SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase Ubp22|Sch... 25 5.9
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 25 5.9
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 25 7.8
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 25 7.8
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 25 7.8
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 27.5 bits (58), Expect = 1.5
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +1
Query: 304 LGDANGKAKEALEQSRQNIERTAEELRKAHPD---VEKNATALREKLQAAVQNTVXESXK 474
+ +A KA+++LEQ+ + E L K H + E+ + +EKL A ++ S +
Sbjct: 52 INEAQKKAEKSLEQTEARKQNFTELLEKEHEEQAITEQEIFSFQEKLDAMLKRKQKLSEE 111
Query: 475 L 477
L
Sbjct: 112 L 112
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 325 AKEALEQSRQNIERTAEELRK-AHPDVEKNATALRE 429
A E +++ +IER+A K A + E+ ATALRE
Sbjct: 157 ASERAREAQSSIERSASLREKQAREEAERAATALRE 192
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 120 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 239
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 2.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +3
Query: 114 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 203
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 292 SXAALGDANGKAKEALEQSRQNIERTAEE 378
S A G NG+AKE E+ R ++T E+
Sbjct: 468 SSAKQGKGNGRAKETPEEKRARKKKTKED 496
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 26.2 bits (55), Expect = 3.4
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 337 LEQSRQNIERTAEELRKAHPDVEK 408
+EQ+R E T E++++A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC18B11.02c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 394
Score = 25.8 bits (54), Expect = 4.5
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 84 CIALAQGAMVRRDAPDFFKDIEHHTKEFH-KTLEQQFNSLTKSKDAQDFSKAWKDGSESV 260
C + +G +RR P +++ I ++ KTL + FN+ + +++ + KA ++G V
Sbjct: 13 CEYVFKGDGLRRVPPYYYEYITFAKLRWYGKTLLEVFNTEFRDRESGYYEKAIRNGQVKV 72
Query: 261 LQQL 272
Q+
Sbjct: 73 NNQI 76
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 25.8 bits (54), Expect = 4.5
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +3
Query: 156 TKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQXSA 305
+K+ + E+Q +T DFS K + L+AF K L+ S+
Sbjct: 89 SKKSSASAEEQTEDITTESGELDFSSMKKKKKKKKSADLSAFEKELEASS 138
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 25.4 bits (53), Expect = 5.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 93 LAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDA 218
L + V R F + +EH+ K+LE+Q + L +SKDA
Sbjct: 193 LKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQSKDA 233
>SPCC188.08c |ubp22|ubp5|ubiquitin C-terminal hydrolase
Ubp22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1108
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 316 NGKAKEALEQSRQNIERTAEELRKAHPDVEKN 411
N K KE E++ + EELR+A PD E++
Sbjct: 22 NEKLKEDFEENVSIDVKIHEELRRALPDYEES 53
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 25.4 bits (53), Expect = 5.9
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +1
Query: 322 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXVSSNV 501
K+++ LE S Q +E E + P+V++ +EK ++ V+ ES + +S N+
Sbjct: 132 KSEKPLETS-QKVEIETVETKPGEPEVKQETNLQKEKKESKVK---LESKE--EKISRNL 185
Query: 502 QETNEKLAP 528
+ ++ ++P
Sbjct: 186 RSSSRSISP 194
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 25.0 bits (52), Expect = 7.8
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +1
Query: 304 LGDANGKAKEALEQSRQNIE-----RTAEELRKAHPDVEKNATALREKLQAA 444
L + N + KE +E + RT +E EKN LRE+L+ A
Sbjct: 525 LTEMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux
transporter Bfr1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1530
Score = 25.0 bits (52), Expect = 7.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1
Query: 431 FSRRAVAFFSTSGWALRSSSAVRSMF 354
FSR V FFS AL+S S + +MF
Sbjct: 570 FSRGGVLFFSILFCALQSLSEIANMF 595
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect = 7.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +1
Query: 310 DANGKAKEALEQSRQNIERTAEE 378
D+ KAK LEQ+R +ERT E
Sbjct: 403 DSIKKAKTELEQARIELERTQRE 425
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.125 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,601,801
Number of Sequences: 5004
Number of extensions: 24370
Number of successful extensions: 113
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 112
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 242064240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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