Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J22
         (569 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52...    34   0.092
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665     32   0.37 
04_01_0180 + 2034021-2034023,2034741-2035088                           31   0.85 
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401     28   4.6  
03_05_0373 + 23581812-23583293                                         28   6.0  
03_06_0040 + 31240164-31241102,31241280-31241897                       27   8.0  

>02_01_0075 -
           522554-522616,522742-522748,523033-523136,523237-523368,
           525209-525401,525978-526330,526693-526791,526864-526935,
           527062-527213,527338-527386,527755-527885,528067-528307,
           528392-528565,528656-528797,529236-529282,529370-529450,
           530170-530271,530345-530440,531437-531444,531575-531616,
           531830-531894,534761-534853,534888-534959,535303-535509,
           536318-537226,537503-538158
          Length = 1429

 Score = 33.9 bits (74), Expect = 0.092
 Identities = 21/73 (28%), Positives = 36/73 (49%)
 Frame = +1

Query: 298 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKL 477
           AA+ DA G+ ++A+E     ++   E+L  A+PDVE     L E L+ A ++   +   L
Sbjct: 514 AAIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEAGRSRNRKQKSL 573

Query: 478 AXXVSSNVQETNE 516
                +N Q   +
Sbjct: 574 ENLFVTNSQRVKK 586


>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
          Length = 727

 Score = 31.9 bits (69), Expect = 0.37
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = +1

Query: 310 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXV 489
           DA G+  EA+E     +    E+L  A+PDV+     L E L+ A +    ++  L   +
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSLENLL 696

Query: 490 SSNVQETNEKLA 525
            +N     +++A
Sbjct: 697 ETNPYTVTKRVA 708


>04_01_0180 + 2034021-2034023,2034741-2035088
          Length = 116

 Score = 30.7 bits (66), Expect = 0.85
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +1

Query: 331 EALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQN 453
           EALE+  QN+ R  EE +K H +++K    L  K   L AA +N
Sbjct: 52  EALERQVQNLTRYKEEKQKQHANLQKEFAELERKYRDLDAAHRN 95


>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
          Length = 500

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = +1

Query: 307 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 438
           GD  G+ + A+  +R   E  A  LR+A    ++ A ALR +++
Sbjct: 47  GDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90


>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 364 ARCSASTVPKPPW 326
           +RCSAST PK PW
Sbjct: 66  SRCSASTPPKSPW 78


>03_06_0040 + 31240164-31241102,31241280-31241897
          Length = 518

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
 Frame = +3

Query: 90  ALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA--WKD 245
           A+AQ    RR+APD   D+    +E    L+ + N L  + +  D+  A  W D
Sbjct: 190 AIAQSKTTRREAPDADTDMSMEAQELRHVLD-ELNPLIGAANLWDYLPALRWFD 242


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.315    0.125    0.355 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,817,857
Number of Sequences: 37544
Number of extensions: 198433
Number of successful extensions: 906
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1317005676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)