Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J22
(569 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 33 0.13
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 29 2.2
At4g27595.1 68417.m03964 protein transport protein-related low s... 29 2.2
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 29 2.9
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 29 2.9
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 28 3.8
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 28 5.0
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 6.7
At2g43040.1 68415.m05341 calmodulin-binding protein similar to p... 27 6.7
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 27 6.7
At5g51370.1 68418.m06369 F-box family protein similar to unknown... 27 8.8
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 27 8.8
At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF... 27 8.8
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 27 8.8
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/72 (22%), Positives = 34/72 (47%)
Frame = +1
Query: 310 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXV 489
+A GKA E + +++N+E+ E R+ ++ L+E+ A Q ++ +
Sbjct: 284 EAKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESG 343
Query: 490 SSNVQETNEKLA 525
+ +ET + A
Sbjct: 344 AQKAEETKDSAA 355
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +1
Query: 346 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXVSSN 498
S N+ RT ++ HP+ + + +RE + + + E+ +L V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 29.1 bits (62), Expect = 2.2
Identities = 28/72 (38%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +1
Query: 310 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLA 480
D K KE+L E QNI + AEELR D K E+L AA ++ V + KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 481 XXVSSNVQETNE 516
S VQE E
Sbjct: 703 ----STVQEAEE 710
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 322 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXVSSNV 501
KA + + +IE EELR HPD + N L+ K+ V+ + S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 502 QETNEKLAPXIK 537
+ E L P +
Sbjct: 246 EFNQEPLLPKFR 257
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +1
Query: 322 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXVSSNV 501
KA + + +IE EELR HPD + N L+ K+ V+ + S +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 502 QETNEKLAPXIK 537
+ E L P +
Sbjct: 246 EFNQEPLLPKFR 257
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 28.3 bits (60), Expect = 3.8
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 129 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKD 245
D IE TK+ +KT EQ+FN + KSK + +D
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVED 86
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 27.9 bits (59), Expect = 5.0
Identities = 16/69 (23%), Positives = 32/69 (46%)
Frame = +1
Query: 340 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXVSSNVQETNEK 519
+++ + + AEEL+ D++ EKL Q E+ +A VSS+V++
Sbjct: 66 QKTVKEFKERAEELQGVKEDLKVRTKQTTEKLYKQGQGVWTEAESVAKKVSSSVKDKFSA 125
Query: 520 LAPXIKAAY 546
+K ++
Sbjct: 126 ATEEVKESF 134
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.5 bits (58), Expect = 6.7
Identities = 21/65 (32%), Positives = 31/65 (47%)
Frame = +1
Query: 331 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXVSSNVQET 510
EAL+ S Q + AE LRKA + E + L +L+ A + A + +VQ
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRK--------ADQLHESVQRL 1048
Query: 511 NEKLA 525
EKL+
Sbjct: 1049 EEKLS 1053
>At2g43040.1 68415.m05341 calmodulin-binding protein similar to
pollen-specific calmodulin-binding protein MPCBP
GI:10086260 from [Zea mays]; contains Pfam profile
PF00515: TPR Domain
Length = 704
Score = 27.5 bits (58), Expect = 6.7
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
Frame = +2
Query: 197 AHQVKGRTGLQQG-LEGRLRV-----RAATAQRLRQESPXQRSETRTARPR 331
A + GR Q+G LEG LRV A QRL+ P ++ T+ RPR
Sbjct: 60 ARALLGRLEYQRGNLEGALRVFEGIDLQAAIQRLQVSVPLEKPATKKNRPR 110
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 27.5 bits (58), Expect = 6.7
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 298 AALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 432
AAL + + +AL + ER AEE R AH + K A RE+
Sbjct: 370 AALNEGKLSSLQALREELATTERRAEEERSAH-NATKMAAMERER 413
>At5g51370.1 68418.m06369 F-box family protein similar to unknown
protein (emb|CAB82288.1) ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 355
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -2
Query: 271 SCCSTDSEPSFQALLKSCASFDLVSELNCC 182
SC D+ P + LL+SC + + + CC
Sbjct: 286 SCRKIDASPGPEKLLRSCPAMESLQLKRCC 315
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding
protein, C-terminal domain
Length = 1060
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 352 QNIERTAEELRKAHPDVEKNATALREKLQAA 444
+++E+ +E RKAH + A AL +LQAA
Sbjct: 876 KSLEKLLDEERKAHIAANRRAEALSLELQAA 906
>At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF21)
identical to heat shock transcription factor 21
[Arabidopsis thaliana] GI:3399765; contains Pfam
profile: PF00447 HSF-type DNA-binding domain
Length = 401
Score = 27.1 bits (57), Expect = 8.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 340 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVXESXKLAXXVSSNVQETNEK 519
++ R+ E +EL++ +EK R+K + + V E LA +S V ETNE+
Sbjct: 153 DEEREVFEMQVKELKERLQHMEK-----RQKTMVSFVSQVLEKPGLALNLSPCVPETNER 207
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 27.1 bits (57), Expect = 8.8
Identities = 16/70 (22%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 322 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE----KLQAAVQNTVXESXKLAXXV 489
KAKE +++R+ ++TAE++ + + AT ++ K+ + V + + +
Sbjct: 251 KAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFL 310
Query: 490 SSNVQETNEK 519
S +ET +K
Sbjct: 311 SGKTEETKQK 320
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.315 0.125 0.355
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,941,861
Number of Sequences: 28952
Number of extensions: 144474
Number of successful extensions: 682
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1102220672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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