Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J21
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O15804 Cluster: Aspartate transcarbamoylase; n=6; Plasm...    43   0.007
UniRef50_Q176A5 Cluster: B-cell lymphoma/leukaemia 11A extra lon...    42   0.013
UniRef50_Q8T051 Cluster: LD28458p; n=2; Sophophora|Rep: LD28458p...    36   1.1  
UniRef50_Q5BZU8 Cluster: SJCHGC06901 protein; n=1; Schistosoma j...    36   1.1  
UniRef50_Q0GYN6 Cluster: Hypothetical membrane lipoprotein precu...    33   5.9  
UniRef50_Q4L3J3 Cluster: Similar to DNA-dependent RNA polymerase...    33   7.8  
UniRef50_Q1WW58 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_O15804 Cluster: Aspartate transcarbamoylase; n=6;
           Plasmodium|Rep: Aspartate transcarbamoylase - Plasmodium
           falciparum
          Length = 375

 Score = 42.7 bits (96), Expect = 0.007
 Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
 Frame = +1

Query: 121 NLNXKMNNVCSACLSNGRVLHSIENTIYSKFYIQFVYES-SSVN-ASEICLRICWECKAL 294
           N+N K+N      L NGR +HS+ + + S++ + F + S  S+N   +I   I +     
Sbjct: 209 NINKKLNIAFVGDLKNGRTVHSL-SKLLSRYNVSFNFVSCKSLNIPKDIVNTITYN---- 263

Query: 295 LRKFEIFKQKAQSAFKFLTEGLDSLNINPFLLQSQLQIYRLHNYDYSDDVKHEDIIXEAX 474
           L+K   +   +   F  L EGL+ ++I   +  +++Q  R  + D  +  K+  I+    
Sbjct: 264 LKKNNFYSDDSIKYFDNLEEGLEDVHI---IYMTRIQKERFTDVDEYNQYKNAFILSNKT 320

Query: 475 LQXKIEPVEHDEPXTFVNDFVVDXEARP 558
           L+   +  +   P   VN+  V+ ++ P
Sbjct: 321 LENTRDDTKILHPLPRVNEIKVEVDSNP 348


>UniRef50_Q176A5 Cluster: B-cell lymphoma/leukaemia 11A extra long
           form, putative; n=1; Aedes aegypti|Rep: B-cell
           lymphoma/leukaemia 11A extra long form, putative - Aedes
           aegypti (Yellowfever mosquito)
          Length = 614

 Score = 41.9 bits (94), Expect = 0.013
 Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 11/143 (7%)
 Frame = +1

Query: 124 LNXKMNNVCSACLS----NGRVLHSIENTIYSKFYI------QFVYESSSVNASEICLRI 273
           L+  + N+C  CLS    + R+ H   + I   F +      QF    +   +     +I
Sbjct: 10  LDMDVENMCRICLSQTDASERLFHIFSSAIVDGFLVAIPDVLQFCVNLTVSKSDGKPCKI 69

Query: 274 CWECKALLRKFEIFKQKAQSAFKFLTEGLDS-LNINPFLLQSQLQIYRLHNYDYSDDVKH 450
           C +CK+ L +F +FKQK Q   K L E L S +  N     S L +  L +   SDD   
Sbjct: 70  CQKCKSQLLEFYLFKQKCQRTDKVLQEALGSPIKQN----DSDLLLASLRSPSVSDDNIM 125

Query: 451 EDIIXEAXLQXKIEPVEHDEPXT 519
            +I+  +      E    DEP T
Sbjct: 126 VEILESS---TNCEDTALDEPNT 145


>UniRef50_Q8T051 Cluster: LD28458p; n=2; Sophophora|Rep: LD28458p -
           Drosophila melanogaster (Fruit fly)
          Length = 639

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 24/81 (29%), Positives = 43/81 (53%)
 Frame = +1

Query: 268 RICWECKALLRKFEIFKQKAQSAFKFLTEGLDSLNINPFLLQSQLQIYRLHNYDYSDDVK 447
           RIC EC+  L K  +F+Q+ Q A K L + +  L +     +S++      +YD  D+++
Sbjct: 58  RICQECRYQLEKSFLFRQRCQWAEKKLRKHIRLLGLGK---RSRVFSKDPDDYD-EDELE 113

Query: 448 HEDIIXEAXLQXKIEPVEHDE 510
            ED I    +Q K+  +E ++
Sbjct: 114 FEDSIAFIEVQDKVRKLEDEK 134


>UniRef50_Q5BZU8 Cluster: SJCHGC06901 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC06901 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 173

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +1

Query: 178 LHSIENTIYSKFYIQFVYESSSVNASEICLRICWECKALLRKFEIF 315
           ++++  TI S      +Y +S V +S I  R CW CK LL+  + F
Sbjct: 37  MYNVNFTIASLSRYNCIYVTSHVYSSFISSRTCWNCKRLLKDLDFF 82


>UniRef50_Q0GYN6 Cluster: Hypothetical membrane lipoprotein
           precursor; n=1; Mycoplasma arthritidis|Rep: Hypothetical
           membrane lipoprotein precursor - Mycoplasma arthritidis
          Length = 273

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
 Frame = +1

Query: 184 SIENTIYSKFYIQFVYESSSVNASEICLRICWE-CKALLRKFEIFKQKAQSAF-KFLTEG 357
           +IE T Y+K + +F   +  V   +I +   WE  KA  + +E  K+KA+S F K L   
Sbjct: 122 AIEKTKYTKAWKKFDELAGKVTVFKIKISASWEIIKAAKKVYEEQKEKAKSQFEKLLVAA 181

Query: 358 LDSLNINPFLLQSQLQIYRLHNYDYSDDVK 447
              LN     LQ+++ +  L+N    +++K
Sbjct: 182 QKVLN----ELQTEVLVVDLYNQSEIENLK 207


>UniRef50_Q4L3J3 Cluster: Similar to DNA-dependent RNA polymerase
           sigma subunit; n=2; Staphylococcus haemolyticus|Rep:
           Similar to DNA-dependent RNA polymerase sigma subunit -
           Staphylococcus haemolyticus (strain JCSC1435)
          Length = 196

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 19/74 (25%), Positives = 39/74 (52%), Gaps = 6/74 (8%)
 Frame = +1

Query: 340 KFLTEGLDSLNINPFLLQSQLQIY-RLHNYDYSDDVKHEDIIXEAXLQXKIE-----PVE 501
           KF + G+ + +I   + ++ ++IY  LH +D+S DV  E  +       + +      +E
Sbjct: 42  KFKSYGIQNEDIEDLVQETLIRIYLALHTFDFSTDVPFEHYLNCIVRSMRNDFWRRKYIE 101

Query: 502 HDEPXTFVNDFVVD 543
            D+  + +ND+V+D
Sbjct: 102 TDKHDSIINDYVID 115


>UniRef50_Q1WW58 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 278

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +1

Query: 268 RICWECKALLRKFEIFKQKAQSAFKFLTEGLDSLNINPFLLQSQLQIYRL 417
           +IC + K  ++KF I+K+K       +T+   SLN       S L +Y++
Sbjct: 93  KICKDIKIGIKKFTIWKEKKSILMNVITDLSTSLNFEKMQFNSHLFVYKI 142


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 471,292,776
Number of Sequences: 1657284
Number of extensions: 7943900
Number of successful extensions: 18475
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17940
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18469
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)