Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J21
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   3.8  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.0  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.7  

>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = -3

Query: 377 FMFNESNPSVRNLKAL*AFCLNISNLRNKALHSQQIRRQ 261
           F FN      R ++   A CL   NL +K  H  + R Q
Sbjct: 239 FHFNRYLTRRRRIEIAHALCLTNKNLVSKPPHEVEKRAQ 277


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 185 ECNTRPLLRHAEHTLFIXLF 126
           EC+  P LRH    +F+ +F
Sbjct: 86  ECDNEPKLRHYLIFIFVNVF 105


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 373 INPFLLQSQLQIYRLHNYDYSD 438
           +NP+L    L +  LH  D  D
Sbjct: 118 VNPYLFSYALSVAILHRQDTQD 139


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,107
Number of Sequences: 336
Number of extensions: 2197
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)