Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J20
(632 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a pr... 170 4e-42
BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a ... 170 4e-42
BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a ... 170 4e-42
BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a ... 170 4e-42
AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a ... 170 4e-42
AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a ... 170 4e-42
X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA ... 136 6e-32
AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein L18a-... 116 9e-26
AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a ... 73 1e-12
>L05093-1|AAC18781.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 170 bits (413), Expect = 4e-42
Identities = 80/139 (57%), Positives = 93/139 (66%)
Frame = +3
Query: 165 IVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 344
+VAKSRFWYF+ QLKK KK++G NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 345 RDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 524
RDL+ GAVTQCYR MG SIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 525 VHHYKRLNTFAYKRPSTYF 581
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 52 MKAKGQLREYEVIGRKLPSENEPKPPL 132
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC071920-1|AAH71920.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 170 bits (413), Expect = 4e-42
Identities = 80/139 (57%), Positives = 93/139 (66%)
Frame = +3
Query: 165 IVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 344
+VAKSRFWYF+ QLKK KK++G NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 345 RDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 524
RDL+ GAVTQCYR MG SIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 525 VHHYKRLNTFAYKRPSTYF 581
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 52 MKAKGQLREYEVIGRKLPSENEPKPPL 132
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC066319-1|AAH66319.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 170 bits (413), Expect = 4e-42
Identities = 80/139 (57%), Positives = 93/139 (66%)
Frame = +3
Query: 165 IVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 344
+VAKSRFWYF+ QLKK KK++G NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 345 RDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 524
RDL+ GAVTQCYR MG SIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 525 VHHYKRLNTFAYKRPSTYF 581
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 52 MKAKGQLREYEVIGRKLPSENEPKPPL 132
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>BC007512-1|AAH07512.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 170 bits (413), Expect = 4e-42
Identities = 80/139 (57%), Positives = 93/139 (66%)
Frame = +3
Query: 165 IVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 344
+VAKSRFWYF+ QLKK KK++G NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 345 RDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 524
RDL+ GAVTQCYR MG SIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 525 VHHYKRLNTFAYKRPSTYF 581
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 52 MKAKGQLREYEVIGRKLPSENEPKPPL 132
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AK222647-1|BAD96367.1| 176|Homo sapiens ribosomal protein L18a
variant protein.
Length = 176
Score = 170 bits (413), Expect = 4e-42
Identities = 80/139 (57%), Positives = 93/139 (66%)
Frame = +3
Query: 165 IVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 344
+VAKSRFWYF+ QLKK KK++G NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 345 RDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 524
RDL+ GAVTQCYR MG SIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTAAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 525 VHHYKRLNTFAYKRPSTYF 581
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 52 MKAKGQLREYEVIGRKLPSENEPKPPL 132
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>AC005796-1|AAC62828.1| 176|Homo sapiens ribosomal protein L18a
protein.
Length = 176
Score = 170 bits (413), Expect = 4e-42
Identities = 80/139 (57%), Positives = 93/139 (66%)
Frame = +3
Query: 165 IVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 344
+VAKSRFWYF+ QLKK KK++G NFGIWLRY+SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREY 97
Query: 345 RDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKR 524
RDL+ GAVTQCYR MG SIQI+KVE I A+ CRRP VKQFH+S I+FPLP R
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHR 157
Query: 525 VHHYKRLNTFAYKRPSTYF 581
V + F KRP+T+F
Sbjct: 158 VLRRQHKPRFTTKRPNTFF 176
Score = 35.5 bits (78), Expect = 0.16
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +1
Query: 52 MKAKGQLREYEVIGRKLPSENEPKPPL 132
MKA G LREY+V+GR LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRCLPTPKCHTPPL 27
>X80822-1|CAA56788.1| 140|Homo sapiens protein ( H.sapiens mRNA for
ORF. ).
Length = 140
Score = 136 bits (329), Expect = 6e-32
Identities = 62/100 (62%), Positives = 71/100 (71%)
Frame = +3
Query: 282 NFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAAA 461
NFGIWL Y+SRSG HNMYREYRDL+ GAVTQCYR MG SIQI+KVE I +
Sbjct: 41 NFGIWLSYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAVSK 100
Query: 462 CRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYKRPSTYF 581
CRRP VKQFH+S I+FPLP RV + F KRP+T+F
Sbjct: 101 CRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF 140
>AY779046-1|AAX47571.1| 136|Homo sapiens ribosomal protein
L18a-like protein protein.
Length = 136
Score = 116 bits (278), Expect = 9e-26
Identities = 55/98 (56%), Positives = 63/98 (64%)
Frame = +3
Query: 165 IVAKSRFWYFLRQLKKFKKTTGXXXXXXXXXXXXXXXXXNFGIWLRYESRSGVHNMYREY 344
+VAKSRFWYF+ QLKK KK++G NFGIWLR +SRSG HNMYREY
Sbjct: 38 VVAKSRFWYFVSQLKKMKKSSGETVYCGQVFEKSPLRVKNFGIWLRCDSRSGTHNMYREY 97
Query: 345 RDLSVGGAVTQCYRXMGXXXXXXXXSIQIIKVEVIXAA 458
RDL+ GAVTQCYR MG SIQI+ VE I A+
Sbjct: 98 RDLTTAGAVTQCYRDMGARHRARAHSIQIMMVEEIAAS 135
Score = 37.5 bits (83), Expect = 0.039
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1
Query: 52 MKAKGQLREYEVIGRKLPSENEPKPPL 132
MKA G LREY+V+GR+LP+ PPL
Sbjct: 1 MKASGTLREYKVVGRRLPTPKCHTPPL 27
>AB007175-1|BAA28596.1| 66|Homo sapiens ribosomal protein L18a
protein.
Length = 66
Score = 72.5 bits (170), Expect = 1e-12
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 384 RXMGXXXXXXXXSIQIIKVEVIXAAACRRPQVKQFHNSTIRFPLPKRVHHYKRLNTFAYK 563
R MG SIQI+KVE I A+ CRRP VKQFH+S I+FPLP RV + F K
Sbjct: 1 RDMGARHRARAHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTK 60
Query: 564 RPSTYF 581
RP+T+F
Sbjct: 61 RPNTFF 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,176,399
Number of Sequences: 237096
Number of extensions: 1765626
Number of successful extensions: 3466
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3459
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6916500330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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