Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J19
(624 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 201 9e-51
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 199 5e-50
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 198 9e-50
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 197 2e-49
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 195 6e-49
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 190 2e-47
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 189 4e-47
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 187 2e-46
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 186 3e-46
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 179 6e-44
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 177 2e-43
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 175 5e-43
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 170 2e-41
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 169 5e-41
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 165 6e-40
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 163 4e-39
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 162 5e-39
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 158 1e-37
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 158 1e-37
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 146 5e-34
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 140 3e-32
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 139 4e-32
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 138 1e-31
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 134 1e-30
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 134 2e-30
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 130 2e-29
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 128 8e-29
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 128 1e-28
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 126 6e-28
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 122 5e-27
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 122 7e-27
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 122 7e-27
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 118 2e-25
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 115 8e-25
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 115 8e-25
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 113 2e-24
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 109 7e-23
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 108 1e-22
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 106 5e-22
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 106 5e-22
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 104 2e-21
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 103 5e-21
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 101 2e-20
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 100 2e-20
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 100 3e-20
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 98 2e-19
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 98 2e-19
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 97 3e-19
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 95 1e-18
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 94 2e-18
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 94 3e-18
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 92 1e-17
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 90 3e-17
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 89 8e-17
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 89 8e-17
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 88 2e-16
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 87 2e-16
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 87 3e-16
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 86 7e-16
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 85 1e-15
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 85 1e-15
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 85 1e-15
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 85 1e-15
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 83 4e-15
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 83 5e-15
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 82 1e-14
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 82 1e-14
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 81 2e-14
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 81 3e-14
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 79 9e-14
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 79 1e-13
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 77 3e-13
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 77 3e-13
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 77 3e-13
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 75 2e-12
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 2e-12
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 74 2e-12
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 73 6e-12
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 73 6e-12
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 73 7e-12
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 69 1e-10
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 69 1e-10
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 68 2e-10
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 68 2e-10
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 67 3e-10
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 67 4e-10
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 66 9e-10
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 65 1e-09
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 63 5e-09
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 3e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 59 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 56 5e-07
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 53 5e-06
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 1e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 46 6e-04
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 44 0.003
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 42 0.012
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.037
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.0
UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing u... 35 1.8
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.8
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 34 3.2
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 3.2
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 33 4.2
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 33 5.6
UniRef50_A6E9R6 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.3
UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3; ... 33 7.3
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 32 9.7
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 201 bits (491), Expect = 9e-51
Identities = 104/178 (58%), Positives = 114/178 (64%)
Frame = +1
Query: 91 VXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 270
V GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 271 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 450
Q PLFV AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 451 FGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FGHPEVYILILPGFGIISH+++ GKKE FG FIV AHH+FTV
Sbjct: 238 FGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTV 295
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 199 bits (485), Expect = 5e-50
Identities = 105/190 (55%), Positives = 117/190 (61%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L +V GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 106 PPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFI 165
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
+ Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGG
Sbjct: 166 TTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGG 225
Query: 415 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXF 594
GDPILYQHLF FFGHPEVYILILPGFG+ISHI++ GKKE FG F
Sbjct: 226 GDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGF 285
Query: 595 IV*AHHIFTV 624
IV AHH+FTV
Sbjct: 286 IVWAHHMFTV 295
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 198 bits (483), Expect = 9e-50
Identities = 101/175 (57%), Positives = 112/175 (64%)
Frame = +1
Query: 100 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 279
G GTG TVYPPLS + H G SVDL IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 280 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 459
+ LF +V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGH
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 460 PEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
PEVYILILPGFGIISH+I E GKKETFG FIV AHH+FT+
Sbjct: 225 PEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTI 279
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 197 bits (481), Expect = 2e-49
Identities = 101/178 (56%), Positives = 114/178 (64%)
Frame = +1
Query: 91 VXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 270
V GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 271 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 450
Q PLFV +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 451 FGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FGHPEVYILILPGFG+ISH+++ GKKE FG FIV AHH+FTV
Sbjct: 238 FGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTV 295
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 195 bits (476), Expect = 6e-49
Identities = 103/190 (54%), Positives = 118/190 (62%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L +V G+GTG TVYPPLS +H G +VDLAIFSLHL+G+SS
Sbjct: 109 PPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFI 168
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
+ +LPLFV +V +TAF AGAIT+LLTDRN NT+FFDPAGG
Sbjct: 169 TTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGG 228
Query: 415 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXF 594
GDPILYQHLF FFGHPEVYILILPGFGIISHI+S G K FG F
Sbjct: 229 GDPILYQHLFWFFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGF 287
Query: 595 IV*AHHIFTV 624
+V AHH+FTV
Sbjct: 288 LVWAHHMFTV 297
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 190 bits (463), Expect = 2e-47
Identities = 98/164 (59%), Positives = 107/164 (65%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP V GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 107 PPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFI 166
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
S Q PLFV +V ITA A IT+LLTDRNLNT+FFDPAGG
Sbjct: 167 TTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGG 226
Query: 415 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFG 546
GDPILYQHLF FFGHPEVYILILPGFG+ISH+++ GKKE FG
Sbjct: 227 GDPILYQHLFWFFGHPEVYILILPGFGMISHVVTYYAGKKEPFG 270
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 189 bits (461), Expect = 4e-47
Identities = 99/190 (52%), Positives = 115/190 (60%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L V GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 106 PPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFI 165
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGG
Sbjct: 166 TTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGG 225
Query: 415 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXF 594
GDPILYQHLF FFGHPEVYILI+PGFG++SHI+S G K FG F
Sbjct: 226 GDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGF 284
Query: 595 IV*AHHIFTV 624
+V +HH++ V
Sbjct: 285 LVWSHHMYAV 294
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 187 bits (455), Expect = 2e-46
Identities = 96/142 (67%), Positives = 99/142 (69%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L IV NGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 79 PPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFI 138
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
SFDQ+PLF+ AVGITA AGAIT+LLTDRNLNTSFFDPAGG
Sbjct: 139 TTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGG 198
Query: 415 GDPILYQHLF*FFGHPEVYILI 480
GDPILYQHLF FFGHPEVYILI
Sbjct: 199 GDPILYQHLFWFFGHPEVYILI 220
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 186 bits (454), Expect = 3e-46
Identities = 99/190 (52%), Positives = 116/190 (61%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L +V G GTG TVYPPLSS +H G +VDLAIFSLH++G SS
Sbjct: 114 PPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFI 173
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
S ++PLFV ++ +TAF AGAIT+LLTDRN NTSFFD +GG
Sbjct: 174 STILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGG 233
Query: 415 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXF 594
GDPILYQHLF FFGHPEVYILILPGFG+ISHI+S +K FG F
Sbjct: 234 GDPILYQHLFWFFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGF 292
Query: 595 IV*AHHIFTV 624
IV AHH++TV
Sbjct: 293 IVWAHHMYTV 302
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 179 bits (435), Expect = 6e-44
Identities = 92/138 (66%), Positives = 96/138 (69%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L IV NGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 103 PPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFI 162
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
SFDQ+PLFV AVGITAF AGAIT+LLTDRNLNTSFFDPAGG
Sbjct: 163 TTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGG 222
Query: 415 GDPILYQHLF*FFGHPEV 468
GDPILYQHLF FFGHP++
Sbjct: 223 GDPILYQHLFWFFGHPKL 240
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 177 bits (431), Expect = 2e-43
Identities = 93/179 (51%), Positives = 108/179 (60%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
+V +GAGTG TVYPPLSS AH G SVDLAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
S ++PLFV A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFW 237
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVYILI+PGFGI+SHI+S KK FG F+V +HH++ V
Sbjct: 238 FFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIV 295
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 175 bits (427), Expect = 5e-43
Identities = 91/179 (50%), Positives = 110/179 (61%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
+V +GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVYILI+PGFGIISH++S KK FG F+V +HH++ V
Sbjct: 238 FFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIV 295
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 170 bits (414), Expect = 2e-41
Identities = 90/174 (51%), Positives = 102/174 (58%)
Frame = +1
Query: 100 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 279
G GTG TVYPPLSS +H G SVDL IFS HL GI S
Sbjct: 125 GPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKD 184
Query: 280 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 459
LPLFV +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 460 PEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
PEVYILILPGFG++SHII+ KK FG FIV AHH++T
Sbjct: 245 PEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYT 297
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 169 bits (411), Expect = 5e-41
Identities = 91/178 (51%), Positives = 104/178 (58%)
Frame = +1
Query: 91 VXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 270
+ NG GTG T+YPPLS +H G SVDLAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 271 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 450
+L LF AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF F
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWF 238
Query: 451 FGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FGHPEVYILI+PGFGIIS IS K FG F+V +HH++TV
Sbjct: 239 FGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTV 295
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 165 bits (402), Expect = 6e-40
Identities = 92/189 (48%), Positives = 106/189 (56%)
Frame = +1
Query: 58 PPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 237
P L+ I+ NG GTG T+YPPLS +H VDL IF LHL+GISS
Sbjct: 134 PSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIA 193
Query: 238 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 417
+L LF AV ITA A AIT+LLTDRNLNTSF++ AGGG
Sbjct: 194 TLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGG 253
Query: 418 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFI 597
D ILYQHLF FFGHPEVYILI+PGFGIIS +IS K FG FI
Sbjct: 254 DAILYQHLFWFFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFI 312
Query: 598 V*AHHIFTV 624
V +HH++TV
Sbjct: 313 VWSHHMYTV 321
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 163 bits (395), Expect = 4e-39
Identities = 81/179 (45%), Positives = 107/179 (59%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ ++PLF +V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F
Sbjct: 283 TLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFW 342
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVYI+ILP FG+ISHI++ KK FG F+V AHH++TV
Sbjct: 343 FFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTV 400
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 162 bits (394), Expect = 5e-39
Identities = 87/175 (49%), Positives = 105/175 (60%)
Frame = +1
Query: 97 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 276
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 277 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 456
++PLFV +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 457 HPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
HPEVYI+ILPGFGIIS I+S +K FG F+V AHH+FT
Sbjct: 283 HPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFT 336
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 158 bits (383), Expect = 1e-37
Identities = 80/179 (44%), Positives = 106/179 (59%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVYILI+P FG++S I+ Q KK FG F V +HH+FTV
Sbjct: 255 FFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTV 312
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 158 bits (383), Expect = 1e-37
Identities = 80/179 (44%), Positives = 106/179 (59%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVYILI+P FG++S I+ Q KK FG F V +HH+FTV
Sbjct: 255 FFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTV 312
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 146 bits (353), Expect = 5e-34
Identities = 76/135 (56%), Positives = 85/135 (62%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L + V GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 25 PPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFI 84
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
+ ++PLFV AV ITA AGAIT+LLTDRN+NTSFFDPAGG
Sbjct: 85 STVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGG 144
Query: 415 GDPILYQHLF*FFGH 459
GDPILYQHLF F GH
Sbjct: 145 GDPILYQHLFWFXGH 159
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 140 bits (338), Expect = 3e-32
Identities = 73/174 (41%), Positives = 95/174 (54%), Gaps = 1/174 (0%)
Frame = +1
Query: 100 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 279
G G G T+YPPLS++ G +DLA+FSLH+AG+SS F
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMS 182
Query: 280 L-PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 456
L P+ + + T+ A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFG
Sbjct: 183 LNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFG 242
Query: 457 HPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
HPEVYILILP FG+ISHI+ + K FG F+V HH+F
Sbjct: 243 HPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMF 296
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 139 bits (337), Expect = 4e-32
Identities = 73/134 (54%), Positives = 84/134 (62%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L+ +V GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 107 PPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFI 166
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
+ ++PLFV +V ITA AGAIT+LLTDR NT+FFDPAGG
Sbjct: 167 TTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGG 226
Query: 415 GDPILYQHLF*FFG 456
GDPILYQHLF FFG
Sbjct: 227 GDPILYQHLFWFFG 240
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 138 bits (333), Expect = 1e-31
Identities = 73/130 (56%), Positives = 79/130 (60%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L V +GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 89 PPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFI 148
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
+ + LFV +V ITA AGAIT+LLTDRN NTSFFDPAGG
Sbjct: 149 TTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGG 208
Query: 415 GDPILYQHLF 444
GDPILYQHLF
Sbjct: 209 GDPILYQHLF 218
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 134 bits (325), Expect = 1e-30
Identities = 71/130 (54%), Positives = 79/130 (60%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L V GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 106 PPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFI 165
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
+ +LPLFV A+ +TA AGAIT+LLTDRN NTSF+DPAGG
Sbjct: 166 TTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGG 225
Query: 415 GDPILYQHLF 444
GDPILYQHLF
Sbjct: 226 GDPILYQHLF 235
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 134 bits (324), Expect = 2e-30
Identities = 77/163 (47%), Positives = 90/163 (55%), Gaps = 4/163 (2%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXX 222
PP L I+ G GTG T+ YPPLS +H G SVDLAIF+LHL+G+SS
Sbjct: 135 PPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGS 194
Query: 223 XXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFD 402
+L LF + IT++LTDRN NTSFF+
Sbjct: 195 INFITTVANMRTPGIKLHKLALF-------GWATWSSRSRYFLGITMVLTDRNFNTSFFE 247
Query: 403 PAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 531
AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 248 VAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 130 bits (315), Expect = 2e-29
Identities = 57/81 (70%), Positives = 62/81 (76%)
Frame = +3
Query: 378 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRN 557
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 558 NLCYTSNWVIXIYCLSSSYIH 620
NLCY SNW+I IYCLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 128 bits (310), Expect = 8e-29
Identities = 74/175 (42%), Positives = 89/175 (50%)
Frame = +1
Query: 100 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 279
G G G T+YPPLS G VD +FSLHLAG+SS S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS--- 272
Query: 280 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 459
+ V A T+ A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGH
Sbjct: 273 --IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGH 330
Query: 460 PEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
PEVY+LILPGFGI+SHI +FG +V HH+F V
Sbjct: 331 PEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFMV 385
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 128 bits (308), Expect = 1e-28
Identities = 67/132 (50%), Positives = 81/132 (61%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
+V +GAGTG TVYPPLSS AH G SVDLAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 448 FFGHPEVYILIL 483
FFG I++L
Sbjct: 238 FFGQTVATIIML 249
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 126 bits (303), Expect = 6e-28
Identities = 68/119 (57%), Positives = 77/119 (64%)
Frame = -2
Query: 443 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDI 264
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 263 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFXTI 87
+R I+E PAKC+EKI STD P CAI SGG TVHPVP P TI
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTI 118
Score = 39.9 bits (89), Expect = 0.048
Identities = 16/24 (66%), Positives = 22/24 (91%)
Frame = -3
Query: 73 NNIREGGRSQNLILFIRGNAISGA 2
+ ++EGG +QNL+LFIRGNA+SGA
Sbjct: 123 SKVKEGGSNQNLMLFIRGNAMSGA 146
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 122 bits (295), Expect = 5e-27
Identities = 69/179 (38%), Positives = 89/179 (49%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
+ G G G T+YP L H + D +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFF 179
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
SF LF+ A ITA AG +T++L DRN NTSF+D GGGD IL+QH+F
Sbjct: 180 SFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFW 239
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVYI++LP FG+IS I+ + G + F V AHH+F V
Sbjct: 240 FFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVV 297
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 122 bits (294), Expect = 7e-27
Identities = 67/182 (36%), Positives = 86/182 (47%)
Frame = +1
Query: 76 FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 255
+Q + G G+ T YPPLS S+D I LH GI S
Sbjct: 124 YQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMR 182
Query: 256 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQ 435
+ DQ+ +FV +T+F AG++ LL DRN NTSF+D GG+P+LYQ
Sbjct: 183 STAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQ 242
Query: 436 HLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHI 615
HLF FFGHPEVY++ILP FGIIS + K FG V HH+
Sbjct: 243 HLFWFFGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHM 302
Query: 616 FT 621
+T
Sbjct: 303 YT 304
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 122 bits (294), Expect = 7e-27
Identities = 63/123 (51%), Positives = 76/123 (61%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
+V +GAGTG TVYPPL+S AH G SVDLAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFW 237
Query: 448 FFG 456
FFG
Sbjct: 238 FFG 240
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 118 bits (283), Expect = 2e-25
Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Frame = +1
Query: 100 GAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 276
G GTG T+YPPLS+++ +VD+ IF L ++G++S +
Sbjct: 126 GGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLG 185
Query: 277 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 456
L + ++ IT+ G + +LL+D + NT FFDP GDPILYQHLF FFG
Sbjct: 186 ILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFG 245
Query: 457 HPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
HPEVYILILP FG+ISH+IS + FG +V HH++T
Sbjct: 246 HPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAMGCIAVLGSLVWVHHMYT 299
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 115 bits (277), Expect = 8e-25
Identities = 58/134 (43%), Positives = 81/134 (60%), Gaps = 2/134 (1%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 448 FFGH--PEVYILIL 483
FFG P + I+I+
Sbjct: 255 FFGQIWPIIIIIII 268
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 115 bits (277), Expect = 8e-25
Identities = 60/149 (40%), Positives = 84/149 (56%)
Frame = +1
Query: 100 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 279
G+GTG T+YPPLS+++++ G +D IF L AGI+S D+
Sbjct: 129 GSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDR 186
Query: 280 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 459
+ ++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGH
Sbjct: 187 ISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGH 246
Query: 460 PEVYILILPGFGIISHIISQERGKKETFG 546
PEVYI+ILPGFGIIS ++S KE FG
Sbjct: 247 PEVYIMILPGFGIISLLLSTYT-TKEMFG 274
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 113 bits (273), Expect = 2e-24
Identities = 62/142 (43%), Positives = 78/142 (54%)
Frame = +1
Query: 58 PPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 237
P L +V GAGTG TVY PL+ +H G +VDLAIFSLHL+G SS
Sbjct: 113 PSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFIT 172
Query: 238 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 417
++ +PLF AV TA A +T+ + DRN NTSFF+ AGGG
Sbjct: 173 TFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGG 232
Query: 418 DPILYQHLF*FFGHPEVYILIL 483
D +LYQHLF ++ HPEV I+ L
Sbjct: 233 DAVLYQHLFYWWNHPEVKIICL 254
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 109 bits (261), Expect = 7e-23
Identities = 50/82 (60%), Positives = 58/82 (70%)
Frame = +1
Query: 379 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXX 558
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH+I+ GK+E FG
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 559 XXXXXXXXXXXFIV*AHHIFTV 624
F+V AHH+FTV
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTV 272
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 108 bits (259), Expect = 1e-22
Identities = 59/137 (43%), Positives = 81/137 (59%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI-- 252
Query: 448 FFGHPEVYILILPGFGI 498
F+ +P V ILI GI
Sbjct: 253 FYKNP-VLILIWLTSGI 268
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 106 bits (254), Expect = 5e-22
Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 1/173 (0%)
Frame = +1
Query: 109 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 285
+G T+YPPLS+ A G ++DL++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 286 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 465
++ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPE
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPE 252
Query: 466 VYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
VY++ILP FG+ S I++ K+ FG + V AHH+FTV
Sbjct: 253 VYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFTV 304
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 106 bits (254), Expect = 5e-22
Identities = 65/173 (37%), Positives = 86/173 (49%)
Frame = +1
Query: 103 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 282
A G T YPPLSS SV+ ++FSLHLAGI+S + L
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSL 165
Query: 283 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 462
LF ++ + + A IT++LTD++L T F+D GGDP+LYQHLF FFGHP
Sbjct: 166 SLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHP 225
Query: 463 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
EVY++ILP FG+ S I Q G +V AHH++T
Sbjct: 226 EVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVVWAHHMYT 277
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 104 bits (250), Expect = 2e-21
Identities = 64/170 (37%), Positives = 79/170 (46%)
Frame = +1
Query: 112 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 291
G T YPPLS G +L I SL L G SS +PLF
Sbjct: 138 GWTSYPPLSLLSGKWGE--ELWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLF 195
Query: 292 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 471
A+ T+ A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VY
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVY 255
Query: 472 ILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
I+ILP FG+IS +I +K FG IV AHH+FT
Sbjct: 256 IMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLAISFLGLIVWAHHMFT 304
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 103 bits (246), Expect = 5e-21
Identities = 57/102 (55%), Positives = 61/102 (59%)
Frame = +1
Query: 100 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 279
GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS S Q
Sbjct: 110 GAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQ 169
Query: 280 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 405
PLFV AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 170 TPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 101 bits (241), Expect = 2e-20
Identities = 60/167 (35%), Positives = 78/167 (46%)
Frame = +1
Query: 124 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 303
Y PLSS + VD I L + GI S S ++PLFV +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 304 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 483
+ A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILIL
Sbjct: 208 LMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILIL 267
Query: 484 PGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
PGFG+IS +I +K +G + V AHH+F V
Sbjct: 268 PGFGMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAV 313
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 100 bits (240), Expect = 2e-20
Identities = 61/173 (35%), Positives = 84/173 (48%)
Frame = +1
Query: 103 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 282
A T T+Y PLS ++ +VD+ + LHL G+S+ + L
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDL 236
Query: 283 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 462
+F + + A+ +LL DRN T+FF AGG DPI +QHLF FFGHP
Sbjct: 237 DIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHP 295
Query: 463 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
EVY+L+LP GI+S I+ + G+K FG F V AHH+FT
Sbjct: 296 EVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFT 347
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 100 bits (239), Expect = 3e-20
Identities = 67/177 (37%), Positives = 87/177 (49%), Gaps = 5/177 (2%)
Frame = +1
Query: 103 AGTG*TVYPPLS-----SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
A TG T+Y PLS N A+ G VDL + LHL+G+S+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
S+ L +F + + AI +LL DRN TSFF AG G IL+QHLF
Sbjct: 264 SWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFW 321
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
FFGHPEVYI++LP GIIS+I+ + G++ FG F V AHH+F
Sbjct: 322 FFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMF 377
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 97.9 bits (233), Expect = 2e-19
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Frame = +1
Query: 103 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 282
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 283 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF* 447
PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 215 PLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFW 274
Query: 448 FFGHPEVYILILPGFGIISHIIS 516
FGHPEVYI+ILP +GI+ ++S
Sbjct: 275 IFGHPEVYIMILPAWGILGDVLS 297
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 97.9 bits (233), Expect = 2e-19
Identities = 58/180 (32%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Frame = +1
Query: 97 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 276
+G G T+YPPLS+ + VDL + + +AG SS
Sbjct: 127 HGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKML 184
Query: 277 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----DPAGGGDPILYQHL 441
+ LF +V + A +LL +R+L FF DPA GDP L+QH+
Sbjct: 185 DMSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHI 244
Query: 442 F*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
F FFGHPEVYIL+LP G++S +I Q ++ +G F V HH+FT
Sbjct: 245 FWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFT 303
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 97.1 bits (231), Expect = 3e-19
Identities = 61/178 (34%), Positives = 78/178 (43%)
Frame = +1
Query: 91 VXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 270
V G Y PL+ VD I + L G++S +
Sbjct: 136 VGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMT 195
Query: 271 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 450
+++PLFV + AF A LL DR+ T FF P GGD +L+QHLF F
Sbjct: 196 LNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWF 255
Query: 451 FGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FGHPEVYILILP GIIS ++ +K FG F+V AHH+F V
Sbjct: 256 FGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAV 312
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 95.1 bits (226), Expect = 1e-18
Identities = 56/176 (31%), Positives = 81/176 (46%)
Frame = +1
Query: 91 VXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 270
V G G Y PLS G+ D+ + +S+ S
Sbjct: 134 VDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMS 193
Query: 271 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 450
D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF F
Sbjct: 194 LDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWF 253
Query: 451 FGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
FGHPEVYI+ LP G++S I++ ++ FG F + HH+F
Sbjct: 254 FGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMF 308
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 94.3 bits (224), Expect = 2e-18
Identities = 57/174 (32%), Positives = 77/174 (44%), Gaps = 2/174 (1%)
Frame = +1
Query: 103 AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 276
A +G YPP+S + + H L I ++ L+GISS F
Sbjct: 146 ASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFF 205
Query: 277 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 456
++P+FV G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 457 HPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
HP VY+L+LP FGI S + +K FG IV AHH+F
Sbjct: 266 HPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASFGITFLSLIVWAHHMF 318
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 93.9 bits (223), Expect = 3e-18
Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
++ G TG T Y P S AH +V +F + G SS
Sbjct: 146 MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGI 202
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF 444
++ ++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF
Sbjct: 203 TWFKMPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLF 261
Query: 445 *FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
F+ HP VYI++LP FG++S +++ +K FG F HH+F
Sbjct: 262 WFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAWGHHMF 318
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 91.9 bits (218), Expect = 1e-17
Identities = 54/167 (32%), Positives = 76/167 (45%)
Frame = +1
Query: 118 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 297
T YPP S N + L +F +HL G SS +F + LFV
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVH 142
Query: 298 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 477
+ AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+
Sbjct: 143 TLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQ 202
Query: 478 ILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
+LP FG S II ++ FG F + HH+F
Sbjct: 203 VLPVFGFYSEII-PVFARRPLFGYTSMVFAVWAITAVSFFLWIHHMF 248
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 90.2 bits (214), Expect = 3e-17
Identities = 50/170 (29%), Positives = 78/170 (45%)
Frame = +1
Query: 112 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 291
G T Y LS + +G +D + L ++G+ + ++ +LPLF
Sbjct: 136 GWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
Query: 292 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 471
+ + + +++ DR T+FF+P GG+ ++++HLF FGHPEVY
Sbjct: 194 TWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVY 253
Query: 472 ILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
ILILP FGI S +I +K FG F+V HH+FT
Sbjct: 254 ILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFT 302
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 89.0 bits (211), Expect = 8e-17
Identities = 55/178 (30%), Positives = 77/178 (43%)
Frame = +1
Query: 91 VXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 270
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 163 VGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMK 222
Query: 271 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 450
+P+F GA+ +L DR L+ FF GG+ ++Y +LF
Sbjct: 223 LMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWA 282
Query: 451 FGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
+GHPEVYIL+LP FGI S ++S GK+ FG F+V HH FT+
Sbjct: 283 WGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTM 339
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 89.0 bits (211), Expect = 8e-17
Identities = 54/179 (30%), Positives = 76/179 (42%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
++ G T Y PL+SN G + + L +AGI +
Sbjct: 157 VIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGM 216
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ ++P+F IT A+ +L DR FF GG P+L+ +LF
Sbjct: 217 TLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFW 276
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
+GHPEVYI+ILP FGI S IIS +K+ FG F+V HH FT+
Sbjct: 277 IWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTM 334
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 87.8 bits (208), Expect = 2e-16
Identities = 52/178 (29%), Positives = 75/178 (42%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
+V GA TG T Y P S+ + V L F L G SS
Sbjct: 139 MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGM 195
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
+ +LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F
Sbjct: 196 GWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFW 255
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
F+ HP VYI++LP +IS ++ +K FG F HH+FT
Sbjct: 256 FYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFT 312
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 87.4 bits (207), Expect = 2e-16
Identities = 56/172 (32%), Positives = 74/172 (43%)
Frame = +1
Query: 103 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 282
A G T+Y PLS I G D+ I + GI S + ++
Sbjct: 148 ADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRM 207
Query: 283 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 462
P+F + + + A +L DR L +DPA GG +L+QHLF FFGHP
Sbjct: 208 PIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHP 266
Query: 463 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
EVY+L LP FGI+S II +K FG V AHH+F
Sbjct: 267 EVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVWAHHMF 317
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 87.0 bits (206), Expect = 3e-16
Identities = 61/179 (34%), Positives = 83/179 (46%), Gaps = 13/179 (7%)
Frame = +1
Query: 121 VYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 291
+YPPLS+ ++ G + + + S+ L IS SF +LPL
Sbjct: 177 IYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRVKGMSFTRLPLT 236
Query: 292 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHL 441
+ A ITA A +L+ DR+L TSFF AG GG P+L+QHL
Sbjct: 237 IWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHL 296
Query: 442 F*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
F F GHPEVYI+++P GI S +I+ +K FG FIV AHH+F
Sbjct: 297 FWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLSFIVWAHHMF 354
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 85.8 bits (203), Expect = 7e-16
Identities = 60/188 (31%), Positives = 84/188 (44%), Gaps = 14/188 (7%)
Frame = +1
Query: 97 NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 155 HGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGM 214
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGG 414
+ +LPL + A+ ITA A ++L DR + T FF P AGG
Sbjct: 215 TMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGG 274
Query: 415 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXF 594
G P+L+QHLF F+ HP VYI+ILP G++S I++ +K FG F
Sbjct: 275 GQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGF 333
Query: 595 IV*AHHIF 618
IV HH+F
Sbjct: 334 IVWGHHMF 341
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 85.4 bits (202), Expect = 1e-15
Identities = 53/174 (30%), Positives = 73/174 (41%)
Frame = +1
Query: 103 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 282
A TG YPPL+ G VD I++L L+G+ + +
Sbjct: 166 AKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDM 225
Query: 283 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 462
P+F A+ +L DR L+ F GG+P++Y +LF +GHP
Sbjct: 226 PIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHP 285
Query: 463 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
EVYILILP FG+ S + S GK+ FG F V HH FT+
Sbjct: 286 EVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTM 338
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 85.4 bits (202), Expect = 1e-15
Identities = 62/184 (33%), Positives = 82/184 (44%), Gaps = 13/184 (7%)
Frame = +1
Query: 106 GTG*TVYPP--LSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 279
G G T+YPP + S + + L + SL L I + +
Sbjct: 151 GAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMR 210
Query: 280 LPLFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA----------GGGDPI 426
LPL V + T G++ +LL DR L TSFF P GGG P+
Sbjct: 211 LPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPL 269
Query: 427 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*A 606
L+QHLF FFGHPEVYI+ LP FGI+S +IS +K FG F+V A
Sbjct: 270 LFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGALSFVVWA 328
Query: 607 HHIF 618
HH++
Sbjct: 329 HHMY 332
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 85.0 bits (201), Expect = 1e-15
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +1
Query: 112 G*TVYPPLSSNIAHRG-RSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 282
G T P SSNI + G S D+ I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 283 PLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 462
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 463 EVYILILPGFGIISHIISQERGKK 534
EVY+LI+P FG I+ I+ ++
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR 426
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 85.0 bits (201), Expect = 1e-15
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 1/170 (0%)
Frame = +1
Query: 112 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 291
G T+Y PL++ I G +DLA ++ L +S + ++P+F
Sbjct: 134 GWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMF 193
Query: 292 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEV 468
++ T +LL DRNL T FF +PAGG +L+ HLF FFGHPEV
Sbjct: 194 TWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEV 251
Query: 469 YILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
YIL+ P G ++ +IS G K + F+V HH+F
Sbjct: 252 YILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISFVVWMHHMF 300
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 83.4 bits (197), Expect = 4e-15
Identities = 51/166 (30%), Positives = 74/166 (44%)
Frame = +1
Query: 121 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 300
+Y PLS++ G S D + + LA I+S S ++P+ +
Sbjct: 170 MYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWY 229
Query: 301 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 480
+ TAF +L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 230 LLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
Query: 481 LPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
LP G+++ ++ G K FG F + AHH+F
Sbjct: 290 LPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLWAHHMF 334
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 83.0 bits (196), Expect = 5e-15
Identities = 53/167 (31%), Positives = 71/167 (42%)
Frame = +1
Query: 124 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 303
Y L+S G D L L GI + + ++P+FV
Sbjct: 149 YANLTSVQFTSGLGPDFWTLGLLLLGIGTLVSGFNFIVTILNMRAPGMTLMKMPVFVWTT 208
Query: 304 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 483
+T+ A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILIL
Sbjct: 209 LVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILIL 268
Query: 484 PGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
P GIIS +I +K FG F V +HH+FTV
Sbjct: 269 PAMGIISEVI-PVHARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTV 314
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 81.8 bits (193), Expect = 1e-14
Identities = 52/164 (31%), Positives = 75/164 (45%)
Frame = +1
Query: 127 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 306
PP S I+ G + D+ IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 307 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 486
++ A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
Query: 487 GFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIF 618
G++ ++ + +K + F AHH+F
Sbjct: 252 AIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSSWAHHMF 294
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 81.8 bits (193), Expect = 1e-14
Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Frame = +1
Query: 121 VYPPLS-SNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 297
+Y PLS + G +L +L L+G+SS + ++PLFV
Sbjct: 127 MYAPLSVETTVNYGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVW 184
Query: 298 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 477
TA + +R T FFD A GG P+L+Q LF FFGHPEVYIL
Sbjct: 185 GFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYIL 244
Query: 478 ILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFI-V*AHHIFT 621
ILP G++S ++ + ++E FG + V HH+FT
Sbjct: 245 ILPAMGLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGVWMHHMFT 292
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 81.4 bits (192), Expect = 2e-14
Identities = 50/171 (29%), Positives = 77/171 (45%)
Frame = +1
Query: 112 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 291
G T Y P S A VD + ++ L G SS S ++P++
Sbjct: 138 GWTFYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIY 194
Query: 292 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 471
V +V + A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY
Sbjct: 195 VWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVY 254
Query: 472 ILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
+++LP GI++ + S +K FG +V AHH+FTV
Sbjct: 255 VMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTV 304
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 80.6 bits (190), Expect = 3e-14
Identities = 53/167 (31%), Positives = 68/167 (40%)
Frame = +1
Query: 124 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 303
YPP + + + G VD I+SL LA + S +PLF
Sbjct: 193 YPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTA 252
Query: 304 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 483
TA L DR L+ FF GG+ + + ++F FGHPEVYILIL
Sbjct: 253 LCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILIL 312
Query: 484 PGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
P FG+ S I S G K FG F+V HH FT+
Sbjct: 313 PAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSFLVWLHHFFTM 358
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 79.0 bits (186), Expect = 9e-14
Identities = 43/127 (33%), Positives = 60/127 (47%)
Frame = +1
Query: 124 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 303
Y PL+S G ++D+ + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 304 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 483
+ + A +L DRN T FFD A GG P+L+QHLF F HP VY+++L
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVL 284
Query: 484 PGFGIIS 504
P GI+S
Sbjct: 285 PAMGIVS 291
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 78.6 bits (185), Expect = 1e-13
Identities = 52/166 (31%), Positives = 72/166 (43%)
Frame = +1
Query: 124 YPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 303
YPPL+ G +D + IS+ S +++P+FV AV
Sbjct: 152 YPPLAGASFSPGLGLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
Query: 304 GITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 483
+ +F A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +
Sbjct: 212 LVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFI 270
Query: 484 PGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
P G++S II ++ FG F + HH+FT
Sbjct: 271 PALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFT 315
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 77.4 bits (182), Expect = 3e-13
Identities = 49/171 (28%), Positives = 71/171 (41%)
Frame = +1
Query: 109 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 288
+G +YPPL+S + G + D + + IS+ S D++P+
Sbjct: 140 SGWFMYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPI 199
Query: 289 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 468
+ +TA +L +R FF A GGD +L+QHLF FGHPEV
Sbjct: 200 YGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEV 259
Query: 469 YILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
YI+ LP G IS I+ + E G F + HH+FT
Sbjct: 260 YIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSFGLWVHHMFT 309
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 77.4 bits (182), Expect = 3e-13
Identities = 49/171 (28%), Positives = 70/171 (40%)
Frame = +1
Query: 109 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 288
+G +YPPLSS + G + D + + IS+ S ++P+
Sbjct: 140 SGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPI 199
Query: 289 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 468
F +TA +L +R + FF A GGD +L+QHLF FGHPEV
Sbjct: 200 FAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEV 259
Query: 469 YILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
YI+ LP G IS I+ + G F + HH+FT
Sbjct: 260 YIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLWVHHMFT 309
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 77.0 bits (181), Expect = 3e-13
Identities = 48/167 (28%), Positives = 70/167 (41%)
Frame = +1
Query: 121 VYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 300
+YPPL+ G + D + + IS+ S ++P+F A
Sbjct: 154 MYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWA 213
Query: 301 VGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 480
+ I A A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 214 MLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
Query: 481 LPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
LP G++S I+ + G F + HH+FT
Sbjct: 274 LPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFT 319
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 74.5 bits (175), Expect = 2e-12
Identities = 52/179 (29%), Positives = 73/179 (40%)
Frame = +1
Query: 88 IVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 267
I+ A TG YPPLS VD +S+ ++GI +
Sbjct: 156 IIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKL 215
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 447
F+++ +F+ + + + DR L+T F+ GG +LY +L
Sbjct: 216 FFNKISIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIW 275
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
+GHPEVYILILP FGI S IIS K F F+V HH FT+
Sbjct: 276 AWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISITVLSFLVWLHHFFTM 333
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 74.1 bits (174), Expect = 2e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 435 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIXIYCLS 605
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 74.1 bits (174), Expect = 2e-12
Identities = 35/59 (59%), Positives = 39/59 (66%)
Frame = +1
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVYILILPGFG+ISHI++ GKKE FG FIV AHH+FTV
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTV 60
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 72.9 bits (171), Expect = 6e-12
Identities = 45/165 (27%), Positives = 69/165 (41%)
Frame = +1
Query: 127 PPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVG 306
PPL++ G + D + + IS+ + ++P+F A+
Sbjct: 215 PPLTTETYSPGYNADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAML 274
Query: 307 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 486
+ A A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 275 VFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLP 334
Query: 487 GFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
G++S I+ + G F + HH+FT
Sbjct: 335 AAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLWVHHMFT 378
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/99 (43%), Positives = 49/99 (49%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L V GAGTG TVYPPLS +H G SVDLAIFSLHL+GISS
Sbjct: 106 PPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFI 165
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 351
+ +LPLFV A+ +TA AG
Sbjct: 166 TTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 72.5 bits (170), Expect = 7e-12
Identities = 39/83 (46%), Positives = 48/83 (57%)
Frame = +1
Query: 130 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 309
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 310 TAFXXXXXXXXXAGAITILLTDR 378
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 68.5 bits (160), Expect = 1e-10
Identities = 52/188 (27%), Positives = 75/188 (39%), Gaps = 14/188 (7%)
Frame = +1
Query: 100 GAGTG*TVYP---PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 270
G G T YP L+ G + + + G SS +
Sbjct: 159 GPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMT 218
Query: 271 FDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------GG 417
F +LP+ + + ITA + + DR T FF P+G GG
Sbjct: 219 FFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGG 278
Query: 418 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFI 597
P+L+QHLF F+ HP VYI++LP G++S ++S +K FG FI
Sbjct: 279 QPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGFI 337
Query: 598 V*AHHIFT 621
V HH+FT
Sbjct: 338 VWGHHMFT 345
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/54 (61%), Positives = 36/54 (66%)
Frame = +1
Query: 463 EVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
EVYILILPGFG+ISHIISQE GKKE FG F+V AHH+FTV
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTV 208
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 68.1 bits (159), Expect = 2e-10
Identities = 47/132 (35%), Positives = 54/132 (40%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXX 234
PP L + G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 96 PPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFL 155
Query: 235 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGG 414
++ LF A AIT+L R N SFF P
Sbjct: 156 VTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXX 215
Query: 415 GDPILYQHLF*F 450
G P + F F
Sbjct: 216 GXPXXFPTFFXF 227
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 67.7 bits (158), Expect = 2e-10
Identities = 45/165 (27%), Positives = 67/165 (40%)
Frame = +1
Query: 130 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 309
PL+ G VD ++++ + + + ++ +LP V
Sbjct: 194 PLTELPYSPGVGVDYWMWAIQIGSVGTTLNAINMIATIVKLRAPGMTWSRLPFVVWTSLT 253
Query: 310 TAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPG 489
T A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP
Sbjct: 254 TNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPA 313
Query: 490 FGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FG IS II +K FG + V HH FT+
Sbjct: 314 FGFISEII-PTFAEKPLFGYATMVIATFAIGGISWGVWLHHFFTM 357
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 11/128 (8%)
Frame = +1
Query: 268 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAG-----------G 414
S ++P+ A IT+ A +L DR TSFF P+G G
Sbjct: 214 SLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGG 273
Query: 415 GDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXF 594
G +L+QHLF FFGHPEVYI ILP GI+SHI+ ++ +
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSY 332
Query: 595 IV*AHHIF 618
+V HH+F
Sbjct: 333 VVWGHHMF 340
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 66.9 bits (156), Expect = 4e-10
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Frame = +1
Query: 118 TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 297
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 130 TGYPPYSI-ITHGNTA--FYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVW 186
Query: 298 AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 474
A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY+
Sbjct: 187 AT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYV 245
Query: 475 LILPGFGIISHIIS 516
+ LP ++ I++
Sbjct: 246 IFLPFMAMVFEIVA 259
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 65.7 bits (153), Expect = 9e-10
Identities = 45/171 (26%), Positives = 68/171 (39%)
Frame = +1
Query: 112 G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 291
G T Y PL+ + G SV + L+ G+ S ++P+F
Sbjct: 145 GWTFYYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVF 202
Query: 292 V*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 471
++ T+ A + + L S F+P GG P+LYQ F F+ HP VY
Sbjct: 203 AWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVY 262
Query: 472 ILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
+++LP GI + + S +K FG IV HH+F V
Sbjct: 263 VMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVWLHHMFAV 312
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 65.3 bits (152), Expect = 1e-09
Identities = 43/171 (25%), Positives = 68/171 (39%)
Frame = +1
Query: 109 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 288
+G +YPPL++ G D+ + L ++S + +PL
Sbjct: 168 SGWFMYPPLATQ--DEGLGSDIWLLGLSFIEVASIAAAVELIVGVLKCRPPGMRVNLMPL 225
Query: 289 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 468
+ V + + +R + FFDP GGDP+L+QHLF FGHPEV
Sbjct: 226 YAWYVLVVGGMILFAFPPLIAGDLLFEMERGFDWPFFDPERGGDPLLWQHLFWIFGHPEV 285
Query: 469 YILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFT 621
YI+ LP + + I+ ++ G F + HH+FT
Sbjct: 286 YIIFLPLIALAAMIV-PTAARQPIVGYSWIVLSAVGTGFLSFGLWVHHMFT 335
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 63.3 bits (147), Expect = 5e-09
Identities = 43/136 (31%), Positives = 61/136 (44%)
Frame = +1
Query: 109 TG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 288
TG TVY PLSS D A ++ L GI + LPL
Sbjct: 154 TGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPL 213
Query: 289 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 468
FV AV A G +LL ++ S++ GG +++++LF +FGHPEV
Sbjct: 214 FVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEV 272
Query: 469 YILILPGFGIISHIIS 516
Y+L+LPG G + +S
Sbjct: 273 YLLLLPGTGAMFDYLS 288
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/56 (51%), Positives = 32/56 (57%)
Frame = +3
Query: 291 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 458
CM C +Y TCFS S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
Score = 56.8 bits (131), Expect = 4e-07
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 186
PP L +V NGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 22 PPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 58.8 bits (136), Expect = 1e-07
Identities = 31/70 (44%), Positives = 40/70 (57%)
Frame = +1
Query: 274 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 453
DQ+ LF ++ IT AG IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 454 GHPEVYILIL 483
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/52 (57%), Positives = 33/52 (63%)
Frame = +1
Query: 55 PPPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 210
PP L +V G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 1 PPSLLLYVISSMVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 56.4 bits (130), Expect = 5e-07
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Frame = +1
Query: 280 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPI 426
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 427 LYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*A 606
L+ HLF FFGHPEVYI+ P G+++ G++ G F+V
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWM 310
Query: 607 HHIF 618
HH+F
Sbjct: 311 HHMF 314
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 53.2 bits (122), Expect = 5e-06
Identities = 26/59 (44%), Positives = 30/59 (50%)
Frame = +1
Query: 448 FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
FFGHPEVY+LILP FGI+SHI FG +V AHH+F V
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMV 59
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 1e-04
Identities = 25/51 (49%), Positives = 29/51 (56%)
Frame = +3
Query: 294 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 446
M C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 435 TFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIXIYCLSSSY 614
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 615 IH 620
+H
Sbjct: 61 VH 62
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 44.0 bits (99), Expect = 0.003
Identities = 29/92 (31%), Positives = 43/92 (46%)
Frame = +3
Query: 306 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 485
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 486 RIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 581
I ++ +K N ++NNL ++ W
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 41.9 bits (94), Expect = 0.012
Identities = 42/188 (22%), Positives = 61/188 (32%)
Frame = +1
Query: 58 PPLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXX 237
PP + G TG YPPL+ N G + + ++S
Sbjct: 204 PPATFAVFMSPTTGGFQTGWWGYPPLAQN---SGSGIVWYVLGAATILVASLLGAINIAG 260
Query: 238 XXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGG 417
S ++P+FV + A + L+D + F+ G
Sbjct: 261 TMVYMRAKGMSLGRVPIFVWGLFAAATTLVVESPATYTGALMDLSDMIAGSHFYT-GPTG 319
Query: 418 DPILYQHLF*FFGHPEVYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFI 597
P+ Y F F HPEVY+ ILP F I I+ K+ F +
Sbjct: 320 HPLAYLDQFWFLFHPEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGLVGVSMSGAM 378
Query: 598 V*AHHIFT 621
HH FT
Sbjct: 379 SGVHHYFT 386
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 40.3 bits (90), Expect = 0.037
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 157 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 336
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 337 XXXAGAITILLTDRNLNT 390
AGAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 412 GGDPILYQHLF*FFGHPEVYILILPGFGIISHIISQERG 528
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q2Y5N3 Cluster: Integral membrane proteins containing
uncharacterized repeats-like precursor; n=3;
Nitrosospira multiformis ATCC 25196|Rep: Integral
membrane proteins containing uncharacterized
repeats-like precursor - Nitrosospira multiformis
(strain ATCC 25196 / NCIMB 11849)
Length = 433
Score = 34.7 bits (76), Expect = 1.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 460 PEVYILILPGFGIISHIISQERGKK 534
PE+Y LILPG G++ I Q++ KK
Sbjct: 407 PEIYALILPGLGLVGFIARQKKAKK 431
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 418 DPILYQHLF*FFGHPEVYILILPGFGIISHI---ISQERGK 531
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 33.9 bits (74), Expect = 3.2
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 466 VYILILPGFGIISHIISQERGKKETFGCXXXXXXXXXXXXXXFIV*AHHIFTV 624
VY++ILP FG++SH + G + + V AHH+FTV
Sbjct: 1 VYVIILPVFGLVSHSL-HRGGLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTV 52
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 3.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 424 ILYQHLF*FFGHPEVYILILPGFGIISHIISQERGK 531
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 33.5 bits (73), Expect = 4.2
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +1
Query: 61 PLYY*FQRRIVXNGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 210
PL++ + G + PL G SVDLAIF LHLAG+SS
Sbjct: 90 PLHWHYYSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.1 bits (72), Expect = 5.6
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 438 FILIFWT--S*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIXIYCLSSS 611
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 612 YIH 620
+H
Sbjct: 618 NVH 620
>UniRef50_A6E9R6 Cluster: Putative uncharacterized protein; n=1;
Pedobacter sp. BAL39|Rep: Putative uncharacterized
protein - Pedobacter sp. BAL39
Length = 1596
Score = 32.7 bits (71), Expect = 7.3
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = +2
Query: 11 YSIPTNK*YKILTPTPLPYIINFNEELXKMVQEQDEQFTPH---FHLISHIEED 163
YSI K I+ P PL ++IN EE+ K + E D ++ H F +S++E +
Sbjct: 495 YSINLLKNVVIINPPPLEFLINIREEI-KYLSEVDRKYKIHPTPFIYLSNVESE 547
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -2
Query: 377 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 255
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q5ABE2 Cluster: Putative uncharacterized protein CLN3;
n=1; Candida albicans|Rep: Putative uncharacterized
protein CLN3 - Candida albicans (Yeast)
Length = 785
Score = 32.7 bits (71), Expect = 7.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2
Query: 431 YKIGSPPPAGSKNDVFKFRSVNN---IVIAPAKTGSDNNNKNAVIPTAH 294
Y++ +PP + +KN K S NN IA T ++NNN N+ +P H
Sbjct: 572 YQMVTPPNSANKNSN-KSNSANNNNTTTIATTTTTTNNNNNNSQLPAPH 619
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 32.3 bits (70), Expect = 9.7
Identities = 22/67 (32%), Positives = 34/67 (50%)
Frame = +3
Query: 411 RRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIX 590
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 591 IYCLSSS 611
LSS+
Sbjct: 94 CNVLSSN 100
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 491,230,993
Number of Sequences: 1657284
Number of extensions: 9228562
Number of successful extensions: 22256
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 20434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22048
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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