Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J18
(558 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A4GUC7 Cluster: Mitochondrial 28S ribosomal protein S18... 128 9e-29
UniRef50_Q9VA81 Cluster: CG9688-PA; n=2; Sophophora|Rep: CG9688-... 83 6e-15
UniRef50_UPI00015B5CDD Cluster: PREDICTED: similar to mitochondr... 79 9e-14
UniRef50_Q7Q866 Cluster: ENSANGP00000012972; n=3; Endopterygota|... 75 1e-12
UniRef50_Q86QR9 Cluster: Mitochondrial ribosomal protein S18C; n... 64 2e-09
UniRef50_Q22483 Cluster: Putative uncharacterized protein; n=2; ... 61 1e-08
UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondri... 59 6e-08
UniRef50_A7RLH4 Cluster: Predicted protein; n=1; Nematostella ve... 56 7e-07
UniRef50_Q4SYF4 Cluster: Chromosome undetermined SCAF12073, whol... 55 1e-06
UniRef50_A4FVK9 Cluster: Si:ch211-85e10.6 protein; n=3; Clupeoce... 55 1e-06
UniRef50_UPI0000588E60 Cluster: PREDICTED: hypothetical protein;... 54 2e-06
UniRef50_UPI0000E803CF Cluster: PREDICTED: similar to CGI-134 pr... 52 7e-06
UniRef50_UPI0000E2034A Cluster: PREDICTED: mitochondrial ribosom... 52 7e-06
UniRef50_UPI0000D9F462 Cluster: PREDICTED: similar to 28S riboso... 45 0.001
UniRef50_Q5GSD5 Cluster: Ribosomal protein S18; n=1; Wolbachia e... 40 0.030
UniRef50_Q8R6M3 Cluster: 30S ribosomal protein S18; n=15; Bacter... 39 0.069
UniRef50_A6Q466 Cluster: 30S ribosomal protein S18; n=6; Epsilon... 39 0.091
UniRef50_Q73GZ6 Cluster: 30S ribosomal protein S18; n=9; Rickett... 39 0.091
UniRef50_Q9RY50 Cluster: 30S ribosomal protein S18; n=5; Deinoco... 39 0.091
UniRef50_UPI0000D569FC Cluster: PREDICTED: similar to CG31450-PA... 37 0.28
UniRef50_Q1E8Y0 Cluster: Putative uncharacterized protein; n=1; ... 36 0.48
UniRef50_Q1AXR1 Cluster: Ribosomal protein S18; n=2; Actinobacte... 36 0.64
UniRef50_Q8XZT6 Cluster: 30S ribosomal protein S18; n=59; Bacter... 35 1.1
UniRef50_Q2GEY4 Cluster: Ribosomal protein S18; n=1; Neoricketts... 35 1.5
UniRef50_Q5C271 Cluster: SJCHGC09615 protein; n=1; Schistosoma j... 35 1.5
UniRef50_Q68XR6 Cluster: 30S ribosomal protein S18; n=9; Rickett... 34 2.0
UniRef50_Q6AK01 Cluster: 30S ribosomal protein S18; n=43; Bacter... 34 2.6
UniRef50_O83100 Cluster: 30S ribosomal protein S18; n=1; Trepone... 33 3.4
UniRef50_O69301 Cluster: 30S ribosomal protein S18; n=20; Campyl... 33 3.4
UniRef50_P66466 Cluster: 30S ribosomal protein S18 2; n=11; Acti... 33 3.4
UniRef50_A5FQL1 Cluster: Ribosomal protein S18; n=39; Bacteria|R... 33 4.5
UniRef50_Q95PY4 Cluster: Putative uncharacterized protein; n=2; ... 33 4.5
UniRef50_Q0UYG5 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q74FE3 Cluster: 30S ribosomal protein S18; n=6; Desulfu... 33 4.5
UniRef50_O66476 Cluster: 30S ribosomal protein S18; n=1; Aquifex... 33 4.5
UniRef50_Q06SF9 Cluster: Chloroplast 30S ribosomal protein S18; ... 33 4.5
UniRef50_UPI00015BB243 Cluster: H(+)-transporting two-sector ATP... 33 6.0
UniRef50_Q2QV40 Cluster: Retrotransposon protein, putative, Ty1-... 33 6.0
UniRef50_Q00WA8 Cluster: Ribosomal protein S18; n=2; Ostreococcu... 33 6.0
UniRef50_Q9WZ74 Cluster: 30S ribosomal protein S18; n=5; Bacteri... 33 6.0
UniRef50_O68127 Cluster: 30S ribosomal protein S18; n=30; Bacter... 33 6.0
UniRef50_A5IY67 Cluster: 30S ribosomal protein S18; n=1; Mycopla... 32 7.9
UniRef50_Q8IGJ2 Cluster: RH06474p; n=1; Drosophila melanogaster|... 32 7.9
UniRef50_Q8IGA1 Cluster: SD13983p; n=4; Diptera|Rep: SD13983p - ... 32 7.9
UniRef50_A0CKL3 Cluster: Chromosome undetermined scaffold_2, who... 32 7.9
UniRef50_Q97CX4 Cluster: 30S ribosomal protein S18; n=7; Clostri... 32 7.9
UniRef50_Q5YPR1 Cluster: 30S ribosomal protein S18 2; n=25; Acti... 32 7.9
>UniRef50_A4GUC7 Cluster: Mitochondrial 28S ribosomal protein S18c;
n=1; Bombyx mori|Rep: Mitochondrial 28S ribosomal
protein S18c - Bombyx mori (Silk moth)
Length = 137
Score = 128 bits (309), Expect = 9e-29
Identities = 57/65 (87%), Positives = 57/65 (87%)
Frame = +3
Query: 306 FNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPENPX 485
F YTGRIYPRHITGLCKRKQMQVEQEIT A D AYMPYTYKHKIFLKDPKLFDPENP
Sbjct: 73 FQSPYTGRIYPRHITGLCKRKQMQVEQEITKAQDFAYMPYTYKHKIFLKDPKLFDPENPV 132
Query: 486 RSHXF 500
RSH F
Sbjct: 133 RSHRF 137
Score = 83.4 bits (197), Expect = 3e-15
Identities = 37/44 (84%), Positives = 39/44 (88%)
Frame = +2
Query: 206 LEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQNLP 337
+EMENPFKKELKQCILCKLNI PDYKNYRLLSQFQSP G+ P
Sbjct: 40 VEMENPFKKELKQCILCKLNIDPDYKNYRLLSQFQSPYTGRIYP 83
Score = 81.4 bits (192), Expect = 1e-14
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +1
Query: 88 MKMALFKSFFARQMLSTHQAVLSTIRTQSTNLKPDPDAP 204
MKMALFKSFFARQMLSTHQAVLSTIRTQS+NLKPDPDAP
Sbjct: 1 MKMALFKSFFARQMLSTHQAVLSTIRTQSSNLKPDPDAP 39
>UniRef50_Q9VA81 Cluster: CG9688-PA; n=2; Sophophora|Rep: CG9688-PA
- Drosophila melanogaster (Fruit fly)
Length = 140
Score = 82.6 bits (195), Expect = 6e-15
Identities = 39/65 (60%), Positives = 43/65 (66%)
Frame = +3
Query: 306 FNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPENPX 485
F YTGRIY RHITGLCKR+Q QVEQ I A MP +K FL+DPKLFDPE P
Sbjct: 76 FQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPV 135
Query: 486 RSHXF 500
R H +
Sbjct: 136 RPHKY 140
Score = 60.9 bits (141), Expect = 2e-08
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +2
Query: 176 PTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
P S+ +P ++++NP++K+ +QCILCK +I P YKN +LLSQFQSP G+
Sbjct: 34 PESSDLDLP-IDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGR 83
>UniRef50_UPI00015B5CDD Cluster: PREDICTED: similar to mitochondrial
ribosomal protein, S18C, putative; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to mitochondrial
ribosomal protein, S18C, putative - Nasonia vitripennis
Length = 145
Score = 78.6 bits (185), Expect = 9e-14
Identities = 35/69 (50%), Positives = 43/69 (62%)
Frame = +3
Query: 294 YYRNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDP 473
+ F R+TGRIY RHITGLCK KQ +VE EIT A MP+ K ++ DPK+FD
Sbjct: 77 FLSQFQSRFTGRIYGRHITGLCKYKQERVENEITKAQHAGLMPFYNKEITYVNDPKIFDV 136
Query: 474 ENPXRSHXF 500
NP R H +
Sbjct: 137 NNPFRPHKY 145
Score = 62.5 bits (145), Expect = 6e-09
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +2
Query: 149 YSPQSGHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
Y+ Q ++ + P +E+ENP+++E K CILCK NI PDYKN R LSQFQS G+
Sbjct: 30 YASQQRAQHSSAEEADAP-IELENPYQRERKICILCKHNIDPDYKNVRFLSQFQSRFTGR 88
>UniRef50_Q7Q866 Cluster: ENSANGP00000012972; n=3;
Endopterygota|Rep: ENSANGP00000012972 - Anopheles
gambiae str. PEST
Length = 149
Score = 74.9 bits (176), Expect = 1e-12
Identities = 34/65 (52%), Positives = 42/65 (64%)
Frame = +3
Query: 306 FNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPENPX 485
F YTGR+Y R+ITGLCK + QVE+EI A + +MP +K FL DPKLFDPE
Sbjct: 85 FQSPYTGRVYGRNITGLCKNRHEQVEREIIKAQNAGFMPTYHKAVEFLNDPKLFDPEKAI 144
Query: 486 RSHXF 500
R H +
Sbjct: 145 RPHKY 149
Score = 61.7 bits (143), Expect = 1e-08
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +2
Query: 167 HNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
H +++ P + +NPF KE QC+LCK I PDYKN +LLSQFQSP G+
Sbjct: 39 HYTTSADNNDSPVVLKDNPFAKERVQCVLCKHGIDPDYKNVQLLSQFQSPYTGR 92
>UniRef50_Q86QR9 Cluster: Mitochondrial ribosomal protein S18C; n=1;
Branchiostoma belcheri tsingtauense|Rep: Mitochondrial
ribosomal protein S18C - Branchiostoma belcheri
tsingtauense
Length = 179
Score = 64.1 bits (149), Expect = 2e-09
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = +3
Query: 318 YTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLF 467
YTGRIY HITGLC +KQ +VE++I A L ++P +K I+ KDPK+F
Sbjct: 95 YTGRIYGHHITGLCDKKQAEVERQIRNAQYLGFLPVMHKDPIYWKDPKIF 144
Score = 57.2 bits (132), Expect = 2e-07
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +2
Query: 182 SNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
+ T MPQ +ME+P+K+E+K+CILC N+ YKN +LLSQF SP G+
Sbjct: 52 TEDTDMPQRQMEDPYKEEVKRCILC--NVELSYKNPQLLSQFLSPYTGR 98
>UniRef50_Q22483 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 139
Score = 61.3 bits (142), Expect = 1e-08
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +3
Query: 300 RNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPEN 479
+ F ++GR+Y RHITGLC + ++ + I + +MP K + +DPKLFDP
Sbjct: 72 QQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKSRRAGFMPIFVKDPKYTRDPKLFDPLK 131
Query: 480 PXRSHXF 500
P R H F
Sbjct: 132 PIRPHSF 138
Score = 42.3 bits (95), Expect = 0.007
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 152 SPQSGHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
S + P+ + P + NP+ KE ++ LC + DYKN RLL QF S G+
Sbjct: 23 SSSTTQGSPSVSSDDEPVILENNPYTKEPRKSFLCSTGVELDYKNSRLLQQFVSTFSGR 81
>UniRef50_Q9Y3D5 Cluster: 28S ribosomal protein S18c, mitochondrial
precursor; n=11; Theria|Rep: 28S ribosomal protein S18c,
mitochondrial precursor - Homo sapiens (Human)
Length = 142
Score = 59.3 bits (137), Expect = 6e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 318 YTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKL 464
+TG IY RHITGLC +KQ ++ + I A + +MP TYK +LKDPK+
Sbjct: 87 FTGCIYGRHITGLCGKKQKEITKAIKRAQIMGFMPVTYKDPAYLKDPKV 135
Score = 52.4 bits (120), Expect = 7e-06
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 164 GHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHG 325
G + S+ +P + MENP+K+ LK+CILC ++ DYKN +LLSQF SP G
Sbjct: 39 GCSQQVSSNEDLP-ISMENPYKEPLKKCILCGKHV--DYKNVQLLSQFVSPFTG 89
>UniRef50_A7RLH4 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 158
Score = 55.6 bits (128), Expect = 7e-07
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Frame = +3
Query: 279 TRITDYYRNFNL------RYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHK 440
T +T Y+N L ++GRIY R +TGLC +KQ ++ I A + MP T KH
Sbjct: 90 TDVTIDYKNVRLLSQFISSHSGRIYNRRVTGLCDKKQKEITNAIKRARAIGLMPVTMKHP 149
Query: 441 IFLKDPKLF 467
F DPKLF
Sbjct: 150 EFHNDPKLF 158
>UniRef50_Q4SYF4 Cluster: Chromosome undetermined SCAF12073, whole
genome shotgun sequence; n=5; Euteleostomi|Rep:
Chromosome undetermined SCAF12073, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 128
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/49 (46%), Positives = 32/49 (65%)
Frame = +3
Query: 318 YTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKL 464
+TG+IY RH TGLC KQ QV + I A + +M T+KH F++DP +
Sbjct: 75 HTGKIYGRHFTGLCGVKQKQVAKAIKKAQSMGFMSVTHKHPQFMRDPNI 123
Score = 48.4 bits (110), Expect = 1e-04
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = +2
Query: 206 LEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
++MENP+K+ K C+LC N+ DYKN +LLSQF SP G+
Sbjct: 40 VKMENPYKEPQKGCVLC--NVTVDYKNIQLLSQFISPHTGK 78
>UniRef50_A4FVK9 Cluster: Si:ch211-85e10.6 protein; n=3;
Clupeocephala|Rep: Si:ch211-85e10.6 protein - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 136
Score = 55.2 bits (127), Expect = 1e-06
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +3
Query: 318 YTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKL 464
+TGRIY RHITGLC RKQ +V + I + + +M T K +F++DP +
Sbjct: 81 HTGRIYGRHITGLCGRKQKEVTKAIKKSRSMGFMSVTLKDPLFIQDPDI 129
Score = 49.6 bits (113), Expect = 5e-05
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +2
Query: 182 SNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
+++ MP ++MENP+K+ K CILC N+ D+KN +LLSQF SP G+
Sbjct: 39 ASKDDMP-IKMENPYKQPAKTCILC--NVTVDFKNVQLLSQFISPHTGR 84
>UniRef50_UPI0000588E60 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 195
Score = 54.0 bits (124), Expect = 2e-06
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +3
Query: 321 TGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFD 470
TGRI+ RHIT LC+ +Q +V + + A + +MP Y+ FLKDP L+D
Sbjct: 105 TGRIFGRHITKLCEAQQRRVTKAVKRAITMGFMPSQYRTTQFLKDPSLYD 154
Score = 45.6 bits (103), Expect = 8e-04
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +2
Query: 176 PTSNQTQMPQLEM----ENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
P ++ Q+ Q E E+P+K +++CILCK + YKN +LLSQF SP G+
Sbjct: 53 PHKDRQQVQQTEAIDCEEDPYKLAVEKCILCKYQVPISYKNVQLLSQFVSPNTGR 107
>UniRef50_UPI0000E803CF Cluster: PREDICTED: similar to CGI-134
protein; n=1; Gallus gallus|Rep: PREDICTED: similar to
CGI-134 protein - Gallus gallus
Length = 101
Score = 52.4 bits (120), Expect = 7e-06
Identities = 24/47 (51%), Positives = 36/47 (76%)
Frame = +2
Query: 188 QTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
++ +P +EMENP+++ K+CILC +N+ DYKN +LLSQF SP G+
Sbjct: 35 ESDLP-IEMENPYEEPPKRCILCGINV--DYKNVQLLSQFVSPYTGR 78
>UniRef50_UPI0000E2034A Cluster: PREDICTED: mitochondrial ribosomal
protein S18C isoform 1; n=1; Pan troglodytes|Rep:
PREDICTED: mitochondrial ribosomal protein S18C isoform
1 - Pan troglodytes
Length = 125
Score = 52.4 bits (120), Expect = 7e-06
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = +2
Query: 164 GHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHG 325
G + S+ +P + MENP+K+ LK+CILC ++ DYKN +LLSQF SP G
Sbjct: 39 GCSQQVSSNEDLP-ISMENPYKEPLKKCILCGKHV--DYKNVQLLSQFVSPFTG 89
Score = 36.7 bits (81), Expect = 0.37
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +3
Query: 318 YTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPY 425
+TG IY RHITGLC +KQ ++ + I A + Y
Sbjct: 87 FTGCIYGRHITGLCGKKQKEITKAIKRAQIMGKKEY 122
>UniRef50_UPI0000D9F462 Cluster: PREDICTED: similar to 28S ribosomal
protein S18c, mitochondrial precursor (MRP-S18-c)
(Mrps18c) (MRP-S18-1); n=1; Macaca mulatta|Rep:
PREDICTED: similar to 28S ribosomal protein S18c,
mitochondrial precursor (MRP-S18-c) (Mrps18c)
(MRP-S18-1) - Macaca mulatta
Length = 105
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/66 (43%), Positives = 41/66 (62%)
Frame = +2
Query: 119 PGKC*ALIRQYSPQSGHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLL 298
PG L+R+ Q + +SN+ +P MENP+K+ LK+CILC ++ +YKN LL
Sbjct: 26 PGTPTVLLRRGCSQ--YKQVSSNE-DLPT-PMENPYKEPLKKCILCGKHV--NYKNAWLL 79
Query: 299 SQFQSP 316
SQF SP
Sbjct: 80 SQFVSP 85
>UniRef50_Q5GSD5 Cluster: Ribosomal protein S18; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Ribosomal
protein S18 - Wolbachia sp. subsp. Brugia malayi (strain
TRS)
Length = 91
Score = 40.3 bits (90), Expect = 0.030
Identities = 21/49 (42%), Positives = 27/49 (55%)
Frame = +3
Query: 288 TDYYRNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYK 434
TD F Y GRI PR +TG+C +KQ ++ I A LA +PY K
Sbjct: 42 TDLLSRFTSDY-GRILPRRLTGVCAKKQRKLRLAIIRARFLALVPYCTK 89
>UniRef50_Q8R6M3 Cluster: 30S ribosomal protein S18; n=15;
Bacteria|Rep: 30S ribosomal protein S18 -
Thermoanaerobacter tengcongensis
Length = 89
Score = 39.1 bits (87), Expect = 0.069
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYT 428
G+I PR ITG C R Q Q+ + I A +A +PYT
Sbjct: 53 GKILPRRITGNCARHQRQLTKAIKRARQIALLPYT 87
>UniRef50_A6Q466 Cluster: 30S ribosomal protein S18; n=6;
Epsilonproteobacteria|Rep: 30S ribosomal protein S18 -
Nitratiruptor sp. (strain SB155-2)
Length = 91
Score = 38.7 bits (86), Expect = 0.091
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 327 RIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDP 458
+I PR +TG CK+ Q+ VE+ I A A +PY K + +P
Sbjct: 39 KIMPRRLTGNCKKHQVMVEEAIKRARHAALVPYIVDRKRVIPNP 82
>UniRef50_Q73GZ6 Cluster: 30S ribosomal protein S18; n=9;
Rickettsiales|Rep: 30S ribosomal protein S18 - Wolbachia
pipientis wMel
Length = 91
Score = 38.7 bits (86), Expect = 0.091
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Frame = +3
Query: 297 YRNFNL--RYT---GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYK 434
Y+N +L ++T GRI PR +TG+C +KQ ++ I A LA +PY K
Sbjct: 39 YKNIDLLSKFTSDYGRILPRRLTGVCAKKQRKLRLAIIRARFLALIPYCTK 89
>UniRef50_Q9RY50 Cluster: 30S ribosomal protein S18; n=5;
Deinococci|Rep: 30S ribosomal protein S18 - Deinococcus
radiodurans
Length = 92
Score = 38.7 bits (86), Expect = 0.091
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 321 TGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYK 434
TG+I PR TGL + Q ++ Q I A LA +PYT K
Sbjct: 51 TGKILPRRRTGLSAKHQRRIAQTIKVARQLALLPYTEK 88
>UniRef50_UPI0000D569FC Cluster: PREDICTED: similar to CG31450-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG31450-PA - Tribolium castaneum
Length = 156
Score = 37.1 bits (82), Expect = 0.28
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 312 LRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPK 461
+R G + PR +TGLCK++Q ++ +T A MP K KDPK
Sbjct: 89 VRSDGCMLPRRVTGLCKKQQKRMSSLVTMAHKAGLMP-NLKPSNSRKDPK 137
>UniRef50_Q1E8Y0 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 184
Score = 36.3 bits (80), Expect = 0.48
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Frame = +3
Query: 291 DYYRNFNL--RYT---GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKH 437
D Y+NF++ Y GRI PR +TGL Q ++ + I A L MP Y+H
Sbjct: 121 DQYKNFSIMSEYMTEMGRIKPRSVTGLRPVNQRKMAKAIRRAIGLGLMPSVYQH 174
>UniRef50_Q1AXR1 Cluster: Ribosomal protein S18; n=2; Actinobacteria
(class)|Rep: Ribosomal protein S18 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 81
Score = 35.9 bits (79), Expect = 0.64
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Frame = +3
Query: 297 YRNFNL--RYT---GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPY 425
Y+++N+ R+T G+I R +TGLC + Q + + I A ++A +PY
Sbjct: 30 YKDYNMLRRFTSERGKIRARRVTGLCPQHQRETARAIKRAREMALLPY 77
>UniRef50_Q8XZT6 Cluster: 30S ribosomal protein S18; n=59;
Bacteria|Rep: 30S ribosomal protein S18 - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 92
Score = 35.1 bits (77), Expect = 1.1
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHK 440
G+I P +TG Q Q++ I A LA MPYT +HK
Sbjct: 53 GKITPARLTGTRSHYQRQLDTAIKRARFLALMPYTDQHK 91
>UniRef50_Q2GEY4 Cluster: Ribosomal protein S18; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S18 -
Neorickettsia sennetsu (strain Miyayama)
Length = 73
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHK 440
GR+ R TGL +KQ ++ +E+ LA +PY +HK
Sbjct: 35 GRVLSRRATGLSAKKQRKMAKEVRKMKFLALVPYCDRHK 73
>UniRef50_Q5C271 Cluster: SJCHGC09615 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09615 protein - Schistosoma
japonicum (Blood fluke)
Length = 228
Score = 34.7 bits (76), Expect = 1.5
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 330 IYPRHITGLCKRKQMQVEQEITXAXDLAYM 419
IYP TG+C+R++ ++QE+ A DL Y+
Sbjct: 163 IYPSSKTGICRRQEKILQQEVEKARDLGYI 192
>UniRef50_Q68XR6 Cluster: 30S ribosomal protein S18; n=9;
Rickettsieae|Rep: 30S ribosomal protein S18 - Rickettsia
typhi
Length = 95
Score = 34.3 bits (75), Expect = 2.0
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHK 440
GR+ P IT +C +KQ ++ I A LA +P+ ++ K
Sbjct: 57 GRMLPSRITNVCAKKQRKLNNAIKIARILALLPFVFQAK 95
>UniRef50_Q6AK01 Cluster: 30S ribosomal protein S18; n=43;
Bacteria|Rep: 30S ribosomal protein S18 - Desulfotalea
psychrophila
Length = 81
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +3
Query: 300 RNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYT 428
RNF + G+I PR I G C Q Q+ + + A +A +PY+
Sbjct: 35 RNF-VSERGKIIPRRIVGTCASHQRQLCEAVKRARQIALLPYS 76
>UniRef50_O83100 Cluster: 30S ribosomal protein S18; n=1; Treponema
pallidum|Rep: 30S ribosomal protein S18 - Treponema
pallidum
Length = 99
Score = 33.5 bits (73), Expect = 3.4
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +3
Query: 291 DYYRNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPY 425
D R F + G+I PR ITG C + Q +V E+ + +A +P+
Sbjct: 52 DTLRRF-ITERGKILPRRITGTCAKHQRRVALEVKRSRAVALLPF 95
>UniRef50_O69301 Cluster: 30S ribosomal protein S18; n=20;
Campylobacterales|Rep: 30S ribosomal protein S18 -
Campylobacter jejuni
Length = 86
Score = 33.5 bits (73), Expect = 3.4
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +3
Query: 327 RIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDP 458
+I PR +TG K+ Q VE I A +A +PY K + +P
Sbjct: 39 KIMPRRLTGTSKKYQEMVEVAIKRARHVALIPYIVDRKEVINNP 82
>UniRef50_P66466 Cluster: 30S ribosomal protein S18 2; n=11;
Actinomycetales|Rep: 30S ribosomal protein S18 2 -
Mycobacterium bovis
Length = 88
Score = 33.5 bits (73), Expect = 3.4
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPY 425
G+I R +TGL ++Q QV Q I A ++A +PY
Sbjct: 42 GKIRSRGVTGLTVQQQRQVAQAIKNAREMALLPY 75
>UniRef50_A5FQL1 Cluster: Ribosomal protein S18; n=39; Bacteria|Rep:
Ribosomal protein S18 - Dehalococcoides sp. BAV1
Length = 147
Score = 33.1 bits (72), Expect = 4.5
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKH 437
G+I PR TG C R Q + I A +A MP+ +H
Sbjct: 51 GKIEPRRRTGTCARHQRALANAIKRARFIALMPFVSEH 88
>UniRef50_Q95PY4 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 183
Score = 33.1 bits (72), Expect = 4.5
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 312 LRYTGRIYPRHITGLCKRKQMQVEQEITXA 401
+R G + PR +TGLCK++Q+++E+ + A
Sbjct: 91 MRDDGTVLPRQLTGLCKKQQLRMERCVMQA 120
>UniRef50_Q0UYG5 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 260
Score = 33.1 bits (72), Expect = 4.5
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +3
Query: 297 YRNFNL--RY---TGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLK 452
Y+NF + Y TGRI TGL + Q ++ + I A L MP ++H + LK
Sbjct: 196 YKNFTMMSEYMTETGRIKHSRDTGLRPKNQRKIAKAIRRAIGLGLMPSVHRHPLVLK 252
>UniRef50_Q74FE3 Cluster: 30S ribosomal protein S18; n=6;
Desulfuromonadales|Rep: 30S ribosomal protein S18 -
Geobacter sulfurreducens
Length = 103
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKI 443
G+I PR I+G C Q ++ + I A ++A +P H I
Sbjct: 63 GKIVPRRISGNCSAHQREITEAIKRARNIALIPIASTHVI 102
>UniRef50_O66476 Cluster: 30S ribosomal protein S18; n=1; Aquifex
aeolicus|Rep: 30S ribosomal protein S18 - Aquifex
aeolicus
Length = 72
Score = 33.1 bits (72), Expect = 4.5
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +3
Query: 300 RNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPY 425
RNF L GRI R TGLC + Q ++ +I A L +PY
Sbjct: 29 RNF-LTERGRIKDRKQTGLCAKHQRRLAVQIKRARQLGLLPY 69
>UniRef50_Q06SF9 Cluster: Chloroplast 30S ribosomal protein S18;
n=2; Eukaryota|Rep: Chloroplast 30S ribosomal protein
S18 - Stigeoclonium helveticum (Green alga)
Length = 129
Score = 33.1 bits (72), Expect = 4.5
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 318 YTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLK 452
+TG+I P+ TG+ ++Q + + I A L +P+ K K F +
Sbjct: 85 FTGKIIPKRKTGITTKQQRYLTKAIKTARILGLLPFVKKEKGFFR 129
>UniRef50_UPI00015BB243 Cluster: H(+)-transporting two-sector
ATPase; n=1; Ignicoccus hospitalis KIN4/I|Rep:
H(+)-transporting two-sector ATPase - Ignicoccus
hospitalis KIN4/I
Length = 654
Score = 32.7 bits (71), Expect = 6.0
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -3
Query: 274 GXYIKFTEYTLFQFFFEWIFHFKLGHLGLV*GWWIVS*LWR 152
G I+ Y +F EW+F+ K GH+G + ++++ LWR
Sbjct: 492 GSDIEQMMYLTGLYFNEWMFNLKTGHIGPLFVLFVIALLWR 532
>UniRef50_Q2QV40 Cluster: Retrotransposon protein, putative,
Ty1-copia subclass; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
Ty1-copia subclass - Oryza sativa subsp. japonica (Rice)
Length = 748
Score = 32.7 bits (71), Expect = 6.0
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 137 LIRQYSPQSGHNPPTSNQTQMPQLEMENPFKKELKQCILC-KLNIXPDYKNY 289
LI Y+ + + P+S Q L + F E QC+ C K N DY ++
Sbjct: 305 LIANYNKEKNYKTPSSKAKQPQHLPQQQQFTVEKDQCLHCKKRNYYKDYPDF 356
>UniRef50_Q00WA8 Cluster: Ribosomal protein S18; n=2;
Ostreococcus|Rep: Ribosomal protein S18 - Ostreococcus
tauri
Length = 135
Score = 32.7 bits (71), Expect = 6.0
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +3
Query: 321 TGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYT 428
TG+IYP+ G+ + Q ++ + I A + +PYT
Sbjct: 87 TGKIYPKRRLGVSAKAQRKISRAIKTARQMGILPYT 122
>UniRef50_Q9WZ74 Cluster: 30S ribosomal protein S18; n=5;
Bacteria|Rep: 30S ribosomal protein S18 - Thermotoga
maritima
Length = 75
Score = 32.7 bits (71), Expect = 6.0
Identities = 14/28 (50%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = +2
Query: 227 KKELKQCILCKLNI-XPDYKNYRLLSQF 307
KK++K+C LC++ + DYK+ RLLS+F
Sbjct: 7 KKKIKKCRLCEMKLDYVDYKDTRLLSEF 34
>UniRef50_O68127 Cluster: 30S ribosomal protein S18; n=30;
Bacteria|Rep: 30S ribosomal protein S18 - Rhodobacter
capsulatus (Rhodopseudomonas capsulata)
Length = 75
Score = 32.7 bits (71), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYK 434
G+I P IT + +KQ ++ Q I A LA +PY K
Sbjct: 39 GKIVPARITAVSAKKQRELAQAIKRARFLALLPYAVK 75
>UniRef50_A5IY67 Cluster: 30S ribosomal protein S18; n=1; Mycoplasma
agalactiae|Rep: 30S ribosomal protein S18 - Mycoplasma
agalactiae
Length = 107
Score = 32.3 bits (70), Expect = 7.9
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDP 458
G+I P TG C R Q +V I A +A +PYT K KI + P
Sbjct: 43 GQIKPHVSTGTCARHQRKVANAIKRARFMALIPYT-KDKIRVLAP 86
>UniRef50_Q8IGJ2 Cluster: RH06474p; n=1; Drosophila
melanogaster|Rep: RH06474p - Drosophila melanogaster
(Fruit fly)
Length = 186
Score = 32.3 bits (70), Expect = 7.9
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 113 FLPGKC*ALIRQYSPQSGHNPPTS 184
FLP KC A IR++SP G PPTS
Sbjct: 71 FLPCKCHAPIRRHSPLPGKVPPTS 94
>UniRef50_Q8IGA1 Cluster: SD13983p; n=4; Diptera|Rep: SD13983p -
Drosophila melanogaster (Fruit fly)
Length = 155
Score = 32.3 bits (70), Expect = 7.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 312 LRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMP 422
+R G + PR ITGLC R+Q ++ +T A MP
Sbjct: 88 VRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMP 124
>UniRef50_A0CKL3 Cluster: Chromosome undetermined scaffold_2, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_2,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 661
Score = 32.3 bits (70), Expect = 7.9
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 143 RQYSPQSGHNPPTSNQTQMPQ-LEMENPFKKELKQCILCKLNIXP 274
R+Y+ QS H SNQ Q Q L M N F KE++ + N P
Sbjct: 438 RKYANQSSHERGESNQVQYKQDLRMNNQFLKEIQYNQILDQNFEP 482
>UniRef50_Q97CX4 Cluster: 30S ribosomal protein S18; n=7;
Clostridiales|Rep: 30S ribosomal protein S18 -
Clostridium acetobutylicum
Length = 90
Score = 32.3 bits (70), Expect = 7.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 324 GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYT 428
G+I PR I+G C + Q ++ I A ++A +P+T
Sbjct: 54 GKILPRRISGNCAKHQRELTIAIKRARNIALLPFT 88
>UniRef50_Q5YPR1 Cluster: 30S ribosomal protein S18 2; n=25;
Actinobacteridae|Rep: 30S ribosomal protein S18 2 -
Nocardia farcinica
Length = 84
Score = 32.3 bits (70), Expect = 7.9
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +3
Query: 297 YRNFNLRYT-----GRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYT 428
Y++ NL T G+I R +TGL ++Q QV + A ++A +P+T
Sbjct: 34 YKDVNLLRTFISDRGKIRSRRVTGLTPQQQRQVAVAVKNAREMALLPFT 82
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 510,991,210
Number of Sequences: 1657284
Number of extensions: 9848361
Number of successful extensions: 24308
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 23623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24292
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37071859483
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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