Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J18
(558 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT029424-1|ABK57081.1| 140|Drosophila melanogaster IP02768p pro... 83 3e-16
BT023241-1|AAY55657.1| 140|Drosophila melanogaster IP02765p pro... 83 3e-16
AE014297-4588|AAF57041.2| 140|Drosophila melanogaster CG9688-PA... 83 3e-16
BT001883-1|AAN71657.1| 155|Drosophila melanogaster SD13983p pro... 32 0.46
BT001759-1|AAN71514.1| 186|Drosophila melanogaster RH06474p pro... 32 0.46
AE014297-765|AAF54251.3| 155|Drosophila melanogaster CG31450-PA... 32 0.46
AE013599-812|AAM68815.2| 388|Drosophila melanogaster CG8046-PB,... 30 1.8
AE013599-811|AAF58974.3| 519|Drosophila melanogaster CG8046-PA,... 30 1.8
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 28 7.4
>BT029424-1|ABK57081.1| 140|Drosophila melanogaster IP02768p
protein.
Length = 140
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/65 (60%), Positives = 43/65 (66%)
Frame = +3
Query: 306 FNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPENPX 485
F YTGRIY RHITGLCKR+Q QVEQ I A MP +K FL+DPKLFDPE P
Sbjct: 76 FQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPV 135
Query: 486 RSHXF 500
R H +
Sbjct: 136 RPHKY 140
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +2
Query: 176 PTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
P S+ +P ++++NP++K+ +QCILCK +I P YKN +LLSQFQSP G+
Sbjct: 34 PESSDLDLP-IDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGR 83
>BT023241-1|AAY55657.1| 140|Drosophila melanogaster IP02765p
protein.
Length = 140
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/65 (60%), Positives = 43/65 (66%)
Frame = +3
Query: 306 FNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPENPX 485
F YTGRIY RHITGLCKR+Q QVEQ I A MP +K FL+DPKLFDPE P
Sbjct: 76 FQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPV 135
Query: 486 RSHXF 500
R H +
Sbjct: 136 RPHKY 140
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +2
Query: 176 PTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
P S+ +P ++++NP++K+ +QCILCK +I P YKN +LLSQFQSP G+
Sbjct: 34 PESSDLDLP-IDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGR 83
>AE014297-4588|AAF57041.2| 140|Drosophila melanogaster CG9688-PA
protein.
Length = 140
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/65 (60%), Positives = 43/65 (66%)
Frame = +3
Query: 306 FNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPENPX 485
F YTGRIY RHITGLCKR+Q QVEQ I A MP +K FL+DPKLFDPE P
Sbjct: 76 FQSPYTGRIYGRHITGLCKRRQEQVEQAILRAQQCLLMPGYHKDLDFLQDPKLFDPERPV 135
Query: 486 RSHXF 500
R H +
Sbjct: 136 RPHKY 140
Score = 60.9 bits (141), Expect = 1e-09
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = +2
Query: 176 PTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
P S+ +P ++++NP++K+ +QCILCK +I P YKN +LLSQFQSP G+
Sbjct: 34 PESSDLDLP-IDIKNPYEKDPQQCILCKHSIEPHYKNVKLLSQFQSPYTGR 83
>BT001883-1|AAN71657.1| 155|Drosophila melanogaster SD13983p
protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 312 LRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMP 422
+R G + PR ITGLC R+Q ++ +T A MP
Sbjct: 88 VRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMP 124
>BT001759-1|AAN71514.1| 186|Drosophila melanogaster RH06474p
protein.
Length = 186
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +2
Query: 113 FLPGKC*ALIRQYSPQSGHNPPTS 184
FLP KC A IR++SP G PPTS
Sbjct: 71 FLPCKCHAPIRRHSPLPGKVPPTS 94
>AE014297-765|AAF54251.3| 155|Drosophila melanogaster CG31450-PA
protein.
Length = 155
Score = 32.3 bits (70), Expect = 0.46
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 312 LRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMP 422
+R G + PR ITGLC R+Q ++ +T A MP
Sbjct: 88 VRSDGCMLPRRITGLCHRQQKKMGTLVTMAQKAGLMP 124
>AE013599-812|AAM68815.2| 388|Drosophila melanogaster CG8046-PB,
isoform B protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 246 HCFSSFLNGFSISSWGIWVWFEVG 175
HC SS + GF++ SW I+V +G
Sbjct: 271 HCSSSLMKGFALESWQIYVAIGLG 294
>AE013599-811|AAF58974.3| 519|Drosophila melanogaster CG8046-PA,
isoform A protein.
Length = 519
Score = 30.3 bits (65), Expect = 1.8
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 246 HCFSSFLNGFSISSWGIWVWFEVG 175
HC SS + GF++ SW I+V +G
Sbjct: 402 HCSSSLMKGFALESWQIYVAIGLG 425
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 28.3 bits (60), Expect = 7.4
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 291 DYYRNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDP 458
+YYR F + Y RHIT LCK K + E Y+ H L+ P
Sbjct: 147 NYYRRFIRNFAD--YSRHITRLCK-KNVPFEWSSECQNAFEYLKENLMHPTLLQYP 199
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,008,004
Number of Sequences: 53049
Number of extensions: 480028
Number of successful extensions: 1181
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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