Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J18
         (558 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50191-9|AAK31558.1|  139|Caenorhabditis elegans Hypothetical pr...    61   6e-10
L23647-3|AAK67242.2|  183|Caenorhabditis elegans Hypothetical pr...    33   0.14 
AL021475-1|CAA16312.1|  758|Caenorhabditis elegans Hypothetical ...    29   3.0  

>U50191-9|AAK31558.1|  139|Caenorhabditis elegans Hypothetical
           protein T14B4.2 protein.
          Length = 139

 Score = 60.9 bits (141), Expect = 6e-10
 Identities = 26/67 (38%), Positives = 38/67 (56%)
 Frame = +3

Query: 300 RNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKIFLKDPKLFDPEN 479
           + F   ++GR+Y RHITGLC   + ++ + I  +    +MP   K   + +DPKLFDP  
Sbjct: 72  QQFVSTFSGRVYDRHITGLCDENKKKLIEAIAKSRRAGFMPIFVKDPKYTRDPKLFDPLK 131

Query: 480 PXRSHXF 500
           P R H F
Sbjct: 132 PIRPHSF 138



 Score = 42.3 bits (95), Expect = 2e-04
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +2

Query: 152 SPQSGHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYRLLSQFQSPLHGQ 328
           S  +    P+ +    P +   NP+ KE ++  LC   +  DYKN RLL QF S   G+
Sbjct: 23  SSSTTQGSPSVSSDDEPVILENNPYTKEPRKSFLCSTGVELDYKNSRLLQQFVSTFSGR 81


>L23647-3|AAK67242.2|  183|Caenorhabditis elegans Hypothetical
           protein ZC262.8 protein.
          Length = 183

 Score = 33.1 bits (72), Expect = 0.14
 Identities = 12/30 (40%), Positives = 22/30 (73%)
 Frame = +3

Query: 312 LRYTGRIYPRHITGLCKRKQMQVEQEITXA 401
           +R  G + PR +TGLCK++Q+++E+ +  A
Sbjct: 91  MRDDGTVLPRQLTGLCKKQQLRMERCVMQA 120


>AL021475-1|CAA16312.1|  758|Caenorhabditis elegans Hypothetical
           protein Y32F6B.1 protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 117 KK*FKQCHFHVGIY*QEICRHVNKFIANK 31
           +K  + CH+H G    EIC+++ K+IA K
Sbjct: 158 QKYVEYCHYHKG---SEICKNLEKYIAEK 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,172,486
Number of Sequences: 27780
Number of extensions: 254138
Number of successful extensions: 638
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)