Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J18
         (558 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    25   0.52 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.6  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              22   3.7  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              22   3.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   4.8  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   8.4  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 17/50 (34%), Positives = 20/50 (40%)
 Frame = +3

Query: 294 YYRNFNLRYTGRIYPRHITGLCKRKQMQVEQEITXAXDLAYMPYTYKHKI 443
           YY    L   G I P      C+ K    + +   A D    PYT KHKI
Sbjct: 414 YYIEEYLPGNGVIIPDDPPIGCECKTCNSKTKCCFAQDDGLCPYTLKHKI 463


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 6/38 (15%)
 Frame = +3

Query: 117 CPANVKHSSGSTLHNQDTIHQ------PQTRPRCPSLK 212
           CP   + +SGST    D +H+      PQ  P+CP  +
Sbjct: 536 CPHRRRANSGSTSSGDDELHRASLSKTPQP-PQCPRFR 572


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 158 QSGHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYR 292
           +SG +  T +       ++E+   +   +CIL + NI  +  N++
Sbjct: 36  ESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFK 80


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 158 QSGHNPPTSNQTQMPQLEMENPFKKELKQCILCKLNIXPDYKNYR 292
           +SG +  T +       ++E+   +   +CIL + NI  +  N++
Sbjct: 36  ESGIDQQTVDDINEVNFDVEDEKPQRYNECILKQFNIVDESGNFK 80


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +3

Query: 324 GRIYPRHITGLCKRKQMQVEQEIT 395
           GR+   +I+ LCK   + V Q+++
Sbjct: 124 GRVRDHNISALCKELGISVVQKVS 147


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 230 KELKQCILCKLNIXPD 277
           K++ QCI C+    PD
Sbjct: 621 KDVTQCISCRQGTVPD 636


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/23 (26%), Positives = 11/23 (47%)
 Frame = -1

Query: 444 IFYVCKCTAYRLNXEXWLFPAPL 376
           + Y C      L+   W++PA +
Sbjct: 532 VVYACNVVGSGLSHGNWIYPASM 554


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,721
Number of Sequences: 438
Number of extensions: 3421
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)