Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J11
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D14811-1|BAA03552.1|  274|Homo sapiens KIAA0110 protein.               38   0.041
CR456893-1|CAG33174.1|  274|Homo sapiens MAD2L1BP protein.             38   0.041
BC002904-1|AAH02904.1|  274|Homo sapiens MAD2L1 binding protein ...    38   0.041
AL136131-1|CAC19507.1|  274|Homo sapiens RP1-261G23.6 protein.         38   0.041
Z49769-1|CAA89839.1|  959|Homo sapiens cL27F12.1 (exons 42-61) p...    30   6.2  
L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease prot...    30   6.2  
AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.           30   6.2  

>D14811-1|BAA03552.1|  274|Homo sapiens KIAA0110 protein.
          Length = 274

 Score = 37.5 bits (83), Expect = 0.041
 Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
 Frame = +2

Query: 209 CGHVVAELIKFIAYQRLQIPYTYPWLKQLITKRKELDHE--NRKESFQSEKHFRTAETAX 382
           C     EL+K I YQR Q+P  Y  LK    K      E   +K    +E   R  + A 
Sbjct: 69  CCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQAL 128

Query: 383 XXXXXXXXXXXXXXXXPSMPDEVCIILGATPITCKEVYRLIL 508
                             +P  V I+LG   ++ KE Y L L
Sbjct: 129 AELESVLSHLEDFFARTLVP-RVLILLGGNALSPKEFYELDL 169


>CR456893-1|CAG33174.1|  274|Homo sapiens MAD2L1BP protein.
          Length = 274

 Score = 37.5 bits (83), Expect = 0.041
 Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
 Frame = +2

Query: 209 CGHVVAELIKFIAYQRLQIPYTYPWLKQLITKRKELDHE--NRKESFQSEKHFRTAETAX 382
           C     EL+K I YQR Q+P  Y  LK    K      E   +K    +E   R  + A 
Sbjct: 69  CCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQAL 128

Query: 383 XXXXXXXXXXXXXXXXPSMPDEVCIILGATPITCKEVYRLIL 508
                             +P  V I+LG   ++ KE Y L L
Sbjct: 129 AELESVLSHLEDFFARTLVP-RVLILLGGNALSPKEFYELDL 169


>BC002904-1|AAH02904.1|  274|Homo sapiens MAD2L1 binding protein
           protein.
          Length = 274

 Score = 37.5 bits (83), Expect = 0.041
 Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
 Frame = +2

Query: 209 CGHVVAELIKFIAYQRLQIPYTYPWLKQLITKRKELDHE--NRKESFQSEKHFRTAETAX 382
           C     EL+K I YQR Q+P  Y  LK    K      E   +K    +E   R  + A 
Sbjct: 69  CCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQAL 128

Query: 383 XXXXXXXXXXXXXXXXPSMPDEVCIILGATPITCKEVYRLIL 508
                             +P  V I+LG   ++ KE Y L L
Sbjct: 129 AELESVLSHLEDFFARTLVP-RVLILLGGNALSPKEFYELDL 169


>AL136131-1|CAC19507.1|  274|Homo sapiens RP1-261G23.6 protein.
          Length = 274

 Score = 37.5 bits (83), Expect = 0.041
 Identities = 29/102 (28%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
 Frame = +2

Query: 209 CGHVVAELIKFIAYQRLQIPYTYPWLKQLITKRKELDHE--NRKESFQSEKHFRTAETAX 382
           C     EL+K I YQR Q+P  Y  LK    K      E   +K    +E   R  + A 
Sbjct: 69  CCQFTCELLKHIMYQRQQLPLPYEQLKHFYRKPSPQAEEMLKKKPRATTEVSSRKCQQAL 128

Query: 383 XXXXXXXXXXXXXXXXPSMPDEVCIILGATPITCKEVYRLIL 508
                             +P  V I+LG   ++ KE Y L L
Sbjct: 129 AELESVLSHLEDFFARTLVP-RVLILLGGNALSPKEFYELDL 169


>Z49769-1|CAA89839.1|  959|Homo sapiens cL27F12.1 (exons 42-61)
           protein.
          Length = 959

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 138 IVRRGPIFLFCVDYLFININSFQYLNMAVVILLQRL 31
           IVRRG + LFC DY+  N++  ++L   +V  +Q L
Sbjct: 34  IVRRGALILFC-DYVCQNLHDSEHLTWLIVNHIQDL 68


>L12392-1|AAB38240.1| 3144|Homo sapiens Huntington's Disease protein
            protein.
          Length = 3144

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 138  IVRRGPIFLFCVDYLFININSFQYLNMAVVILLQRL 31
            IVRRG + LFC DY+  N++  ++L   +V  +Q L
Sbjct: 1895 IVRRGALILFC-DYVCQNLHDSEHLTWLIVNHIQDL 1929


>AB016794-1|BAA36753.1| 3144|Homo sapiens huntingtin protein.
          Length = 3144

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 138  IVRRGPIFLFCVDYLFININSFQYLNMAVVILLQRL 31
            IVRRG + LFC DY+  N++  ++L   +V  +Q L
Sbjct: 1895 IVRRGALILFC-DYVCQNLHDSEHLTWLIVNHIQDL 1929


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,845,450
Number of Sequences: 237096
Number of extensions: 1590948
Number of successful extensions: 2341
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2341
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)