Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J10
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0771 - 21381276-21381461,21381583-21381733,21381823-213820... 35 0.065
08_02_0310 + 15630589-15631035,15631989-15632134,15632732-156329... 30 1.4
03_02_0715 + 10621789-10623243,10624074-10625018 30 1.4
01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982 30 1.4
03_01_0033 - 313838-314029,316008-316102,316735-317056 30 1.9
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 29 3.2
01_01_0257 + 2097785-2097797,2098080-2098189,2098299-2098392,209... 29 3.2
04_04_0347 + 24564589-24565296 29 4.3
01_03_0152 + 13248027-13248419 29 4.3
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 28 5.6
10_08_0934 + 21667688-21667860,21667995-21668093,21668528-216687... 28 7.5
06_03_0095 - 16575938-16576585,16577028-16577219,16577294-165773... 28 7.5
03_02_0055 - 5295466-5295476,5295519-5296635,5296760-5296855,529... 28 7.5
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 28 7.5
09_02_0373 - 8098060-8098229,8098316-8098375,8098486-8098674,809... 27 9.9
08_02_0730 - 20472851-20473075,20473332-20474285 27 9.9
05_05_0244 - 23564267-23564873,23564971-23565149 27 9.9
03_02_0459 + 8649448-8651994 27 9.9
01_06_0513 - 29944888-29945943 27 9.9
>07_03_0771 -
21381276-21381461,21381583-21381733,21381823-21382060,
21382161-21382368,21382650-21382777,21382892-21383029,
21383160-21384012
Length = 633
Score = 34.7 bits (76), Expect = 0.065
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +1
Query: 193 DNYNTASQPALSGVPAVEMQAKHSVLWHLLIDLPI--VLLVAAVCICL 330
D + AS PA VPA + K+S LLI LPI V +VAA+ +C+
Sbjct: 266 DGLSPASAPAPDVVPATTLVKKNSASKILLIVLPIVAVAIVAAISVCM 313
>08_02_0310 +
15630589-15631035,15631989-15632134,15632732-15632900,
15633040-15633138,15633817-15633899,15634028-15634157
Length = 357
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +1
Query: 418 ISLVAAITVIVPFFVLWAVQAMLYQDDEYNMXKRKMLASAKTAGLIY 558
+S + ++P+FVLW ++E K L S TAG+ +
Sbjct: 211 LSCIGGAYALIPYFVLWKPPPPPIDEEEIGQWPLKFLESKLTAGVTF 257
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 297 SPARCGSMHLLGSRGAAEPTQRLHV-QRSSSLFPAYGRHVFHLACRSHHGYRAFFRSLGR 473
+P ++H GS +EP+Q HV +++ ++GRH Y FF L R
Sbjct: 668 APLESDTLHNTGSVPQSEPSQNFHVMSEANTSETSFGRHA--ALSERRQIYERFFMLLSR 725
Query: 474 TSDAI 488
S I
Sbjct: 726 PSPTI 730
>01_07_0349 + 42939178-42939551,42939752-42939904,42940289-42940982
Length = 406
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -1
Query: 434 AATSEMENVSPVCGKERAGSLHVKPLRRLGSAPTSKQMHTAATSRTIG--RSMSKCHNTL 261
AA E V CG+ R S+ K + + S PT + +A + G + ++ HN
Sbjct: 59 AAADEQLQVEAPCGRRRRESMVNKLISTVYSGPTISDIESALSFTAAGDHQLLADGHNFA 118
Query: 260 CFACISTAGTPER 222
+C +PE+
Sbjct: 119 ASSCSPVVFSPEK 131
>03_01_0033 - 313838-314029,316008-316102,316735-317056
Length = 202
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 297 YWQVDEQMP*YAVFRLHFYCWNSRKSWLGCCIIVV 193
+W+V + +P + V R+ YC N RK W C VV
Sbjct: 120 FWEVPDLVPIF-VRRIPLYCENRRKGWEQRCGTVV 153
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +3
Query: 342 AAEPTQRLHVQRSSSLFPA---YGRHVFHLACRSHHGYRAFFRSLGRTSDAISRRRIQH 509
AA+P + R ++ F A +GRH F LA HG F R L R IS +R H
Sbjct: 661 AADPL--IDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHRKLKR---GISTKRGDH 714
>01_01_0257 +
2097785-2097797,2098080-2098189,2098299-2098392,
2098786-2098974,2099061-2099120,2099231-2099391
Length = 208
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 568 IYGAVVNLTILEVVKCVVGTPRPTFF 645
+Y ++ + VVK VG PRP FF
Sbjct: 7 LYSVLITAVVTTVVKNAVGRPRPDFF 32
>04_04_0347 + 24564589-24565296
Length = 235
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +3
Query: 279 AHRPANSPARCGSMHLLGSRGAAEPTQRLHVQRSSSLFPAYGRH 410
AH PA +PA +H S A P HVQ S + P GRH
Sbjct: 136 AHAPAPAPA---VIHGTNSHLAPAPAPSSHVQYSPAPTPGDGRH 176
>01_03_0152 + 13248027-13248419
Length = 130
Score = 28.7 bits (61), Expect = 4.3
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Frame = -3
Query: 384 SWIVAR----EAAASARQRPDFQANAYCRNEQD 298
+W+ AR EA SARQRP A A R + D
Sbjct: 87 AWVTARPLGGEAKTSARQRPGVSAQATARRQPD 119
>03_05_0967 + 29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -3
Query: 468 PENEKRHDNRDGCDKRDGKRVSRMRERESWIVAREAAASARQRPDFQANAYCRNEQDYWQ 289
PENE + G RD R RER+ I + +AR R + ++++D W+
Sbjct: 970 PENEDIVHGQHGYRGRDDPN-RRKRERDDGIDQKRRDDNARMREKADDRYHTKHKEDNWR 1028
Query: 288 VDEQ 277
E+
Sbjct: 1029 QRER 1032
>10_08_0934 +
21667688-21667860,21667995-21668093,21668528-21668736,
21668786-21668925
Length = 206
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 332 KSGRCRADAAASRATIQLSLSRIRETRFPSR 424
K G+C D A T+Q SL R++ FPS+
Sbjct: 74 KMGQCALDNALQTQTLQWSLVRMKICFFPSK 104
>06_03_0095 -
16575938-16576585,16577028-16577219,16577294-16577392,
16577496-16577618,16577717-16577929,16578143-16578251,
16578339-16578427,16578604-16578880,16578974-16579084,
16579160-16580508,16581218-16581631
Length = 1207
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 472 VQAMLYQDDEYNMXKRKMLASAKTAGLIYRDYIYGAVV 585
+ M ++D +YN+ +++L + + L DYIYGAV+
Sbjct: 245 IGTMEWKDKQYNLSPQQLLL--RDSKLRNTDYIYGAVI 280
>03_02_0055 -
5295466-5295476,5295519-5296635,5296760-5296855,
5297097-5297263,5297345-5297519,5297521-5297699,
5298004-5298109
Length = 616
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = -3
Query: 414 KRVSRMRERESWIVAREAAASARQRPDFQANAYCRNEQDYWQVDEQM 274
K + M E E W AR A+ + + + +NE+DY +V ++M
Sbjct: 281 KEILDMPEYEKWFAARFRYATLENEMKWYSTEFHQNEEDY-KVSDKM 326
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 465 ENEKRHDNRDGCDKRDGKRVSRMRERESWIVAREAAASARQRPDFQANAYCRNEQDY 295
+ +K +RD +K K R RERE R + S R+R D + + E+DY
Sbjct: 111 DKDKERRSRDR-EKEKEKEKEREREREKDRERRSRSRSERRRDDEERDRERYRERDY 166
>09_02_0373 -
8098060-8098229,8098316-8098375,8098486-8098674,
8098994-8099108,8099374-8099427,8099600-8099709,
8099792-8099879,8099969-8100181
Length = 332
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 568 IYGAVVNLTILEVVKCVVGTPRPTFF 645
+Y ++ I + +K VG PRP FF
Sbjct: 103 LYSVLITAVITDAIKDGVGRPRPDFF 128
>08_02_0730 - 20472851-20473075,20473332-20474285
Length = 392
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +1
Query: 283 IDLPIVLLVAAVCICLEVGALPSRRSGFTCNDPALSFPHTGDTFSISLVAA 435
++LP + AAVC C AL RR G SFP T I AA
Sbjct: 32 LELPDFIRTAAVCTCWRAPALDLRRRG------VYSFPRTPCLLYIPAAAA 76
>05_05_0244 - 23564267-23564873,23564971-23565149
Length = 261
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = -1
Query: 356 RRLGSAPTSKQMHT-AATSRTIGRSMSKCH-NTLCFACISTAGTPE 225
R + + +KQM+ +ATS T+ + ++ CH N + AC+ A +PE
Sbjct: 5 RSMAARAKAKQMNRPSATSATM-KELALCHDNVVHIACLVAATSPE 49
>03_02_0459 + 8649448-8651994
Length = 848
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Frame = -1
Query: 407 SPVCGKERAGSL---HVKPLRRLGSAPTSKQMHTAA 309
SP G A SL H+KPL G AP+S AA
Sbjct: 127 SPPSGAAAAASLLDDHIKPLGAAGGAPSSSSRAAAA 162
>01_06_0513 - 29944888-29945943
Length = 351
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -3
Query: 423 RDGKRVSRMRERESWI-VAREAAASARQRPDFQANAYCRNEQD 298
R G+R R E W+ V+R AAA+A + P + + CRN D
Sbjct: 117 RAGRRSLRADE---WLEVSRLAAAAASRPPGYYSEQQCRNRID 156
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,843,534
Number of Sequences: 37544
Number of extensions: 399776
Number of successful extensions: 1158
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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