Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J10
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68105-4|CAA92120.2| 304|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical... 37 0.011
AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical... 37 0.011
AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical... 37 0.011
U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical pr... 33 0.23
U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical pr... 33 0.23
U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical pr... 33 0.23
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 27 8.8
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 27 8.8
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 27 8.8
AF039053-7|AAC25873.3| 295|Caenorhabditis elegans Serpentine re... 27 8.8
>Z68105-4|CAA92120.2| 304|Caenorhabditis elegans Hypothetical
protein F13E6.5 protein.
Length = 304
Score = 39.9 bits (89), Expect = 0.002
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Frame = +1
Query: 274 HLLIDLPIVLLVA-AVCICLEVGALPSRRSGFTCNDPALSFPHTGDTFSISLVAAITVIV 450
++ +D+ IVL ++ ++ + + C D ++ P +T + + IT+
Sbjct: 37 YMALDIVIVLGISCSLFLWFSGSGINPYERAMPCGDISIQQPFKENTVGLKHLLVITLGS 96
Query: 451 PFFVLWAVQAMLYQDDEYNMXKRKMLASAKTAGLIYRDYIYGAVVNLTILEVVKCVVGTP 630
PF ++ V+A+L+ + + K SA T + Y Y+ +E +KC VG
Sbjct: 97 PFLIVALVEAILHFKSKGSNRLAKFF-SATT--ITYLKYLLMYAACTFAMEFLKCYVGRL 153
Query: 631 RPTFFDL 651
RP FF +
Sbjct: 154 RPHFFSV 160
>AF098992-15|AAN39673.1| 340|Caenorhabditis elegans Hypothetical
protein F53C3.13c protein.
Length = 340
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/128 (18%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Frame = +1
Query: 295 IVLLVAAVCICLEVGALPSRRSGFTCNDPALSFPHTGDTFSISLVAAITVIVPFFVLWAV 474
+VL + A+ + + +P R GF C+D ++ +P + ++ + +++P ++ A
Sbjct: 17 LVLTLIAIPLYVFHEFIPPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPILLILAT 76
Query: 475 Q---AMLYQDDEYNMXKRKMLASAKTAGLIYRDYIY------GAVVNLTILEVVKCVVGT 627
+ + ++ K + + L+ R Y + G N ++++ K +G
Sbjct: 77 ELFRTLAWEKKCETEFKTYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIAKYTIGR 136
Query: 628 PRPTFFDL 651
RP F D+
Sbjct: 137 QRPHFMDV 144
>AF098992-14|AAD34669.1| 346|Caenorhabditis elegans Hypothetical
protein F53C3.13a protein.
Length = 346
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/128 (18%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Frame = +1
Query: 295 IVLLVAAVCICLEVGALPSRRSGFTCNDPALSFPHTGDTFSISLVAAITVIVPFFVLWAV 474
+VL + A+ + + +P R GF C+D ++ +P + ++ + +++P ++ A
Sbjct: 17 LVLTLIAIPLYVFHEFIPPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPILLILAT 76
Query: 475 Q---AMLYQDDEYNMXKRKMLASAKTAGLIYRDYIY------GAVVNLTILEVVKCVVGT 627
+ + ++ K + + L+ R Y + G N ++++ K +G
Sbjct: 77 ELFRTLAWEKKCETEFKTYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIAKYTIGR 136
Query: 628 PRPTFFDL 651
RP F D+
Sbjct: 137 QRPHFMDV 144
>AF098992-13|AAN39672.1| 385|Caenorhabditis elegans Hypothetical
protein F53C3.13b protein.
Length = 385
Score = 37.1 bits (82), Expect = 0.011
Identities = 24/128 (18%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Frame = +1
Query: 295 IVLLVAAVCICLEVGALPSRRSGFTCNDPALSFPHTGDTFSISLVAAITVIVPFFVLWAV 474
+VL + A+ + + +P R GF C+D ++ +P + ++ + +++P ++ A
Sbjct: 17 LVLTLIAIPLYVFHEFIPPVRRGFYCDDESIRYPFRDSKVTRQMLIVVGLLIPILLILAT 76
Query: 475 Q---AMLYQDDEYNMXKRKMLASAKTAGLIYRDYIY------GAVVNLTILEVVKCVVGT 627
+ + ++ K + + L+ R Y + G N ++++ K +G
Sbjct: 77 ELFRTLAWEKKCETEFKTYHVRNHSVHRLVVRLYCFIGYFFVGVCFNQLMVDIAKYTIGR 136
Query: 628 PRPTFFDL 651
RP F D+
Sbjct: 137 QRPHFMDV 144
>U28738-7|AAA68312.1| 341|Caenorhabditis elegans Hypothetical
protein T28D9.3a protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.23
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 9/132 (6%)
Frame = +1
Query: 283 IDLPIVLLVAAVCICLEVGALPSRRSGFTCNDPALSFPHTGDT--------FSISLVAAI 438
I L I L A + L + GF C+D ++ + + DT +++ L AA
Sbjct: 28 ISLFIFFLATAAVTVIVPTLLGVSQRGFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAAT 87
Query: 439 TVIVPFFVLWAVQAMLYQDDEYNMXKRKMLASAKTAGLIYRDYIY-GAVVNLTILEVVKC 615
+ V ++ + V++ + + Y + L L Y Y G V+N+ + V K
Sbjct: 88 VLFVEYYRMQKVESNI-NNPRYRW-RNNHLHVLFVRLLTYFGYSQIGFVMNIALNIVTKH 145
Query: 616 VVGTPRPTFFDL 651
VVG RP F D+
Sbjct: 146 VVGRLRPHFLDV 157
>U28738-6|AAT92056.1| 274|Caenorhabditis elegans Hypothetical
protein T28D9.3c protein.
Length = 274
Score = 32.7 bits (71), Expect = 0.23
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Frame = +1
Query: 283 IDLPIVLLVAAVCICLEVGALPS-RRSGFTCNDPALSFPHTGDT--------FSISLVAA 435
+ L +VLL + + V L + GF C+D ++ + + DT +++ L AA
Sbjct: 28 VGLNLVLLYGFAAVTVIVPTLLGVSQRGFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAA 87
Query: 436 ITVIVPFFVLWAVQAMLYQDDEYNMXKRKMLASAKTAGLIYRDYIY-GAVVNLTILEVVK 612
+ V ++ + V++ + + Y + L L Y Y G V+N+ + V K
Sbjct: 88 TVLFVEYYRMQKVESNI-NNPRYRW-RNNHLHVLFVRLLTYFGYSQIGFVMNIALNIVTK 145
Query: 613 CVVGTPRPTFFDL 651
VVG RP F D+
Sbjct: 146 HVVGRLRPHFLDV 158
>U28738-5|AAT92055.1| 342|Caenorhabditis elegans Hypothetical
protein T28D9.3b protein.
Length = 342
Score = 32.7 bits (71), Expect = 0.23
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 10/133 (7%)
Frame = +1
Query: 283 IDLPIVLLVAAVCICLEVGALPS-RRSGFTCNDPALSFPHTGDT--------FSISLVAA 435
+ L +VLL + + V L + GF C+D ++ + + DT +++ L AA
Sbjct: 28 VGLNLVLLYGFAAVTVIVPTLLGVSQRGFFCDDDSIRYEYRKDTITAVQLMLYNLVLNAA 87
Query: 436 ITVIVPFFVLWAVQAMLYQDDEYNMXKRKMLASAKTAGLIYRDYIY-GAVVNLTILEVVK 612
+ V ++ + V++ + + Y + L L Y Y G V+N+ + V K
Sbjct: 88 TVLFVEYYRMQKVESNI-NNPRYRW-RNNHLHVLFVRLLTYFGYSQIGFVMNIALNIVTK 145
Query: 613 CVVGTPRPTFFDL 651
VVG RP F D+
Sbjct: 146 HVVGRLRPHFLDV 158
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = -3
Query: 447 DNRDGCDKRDG-----KRVSRMR-ERESWIVAREAAASARQRPDFQA 325
+ R+G D R+ KR + ++ E+E +VA EAA AR++ +++A
Sbjct: 1669 EQRNGADTREQFFNAEKRATLLQSEKEELLVANEAAERARKQAEYEA 1715
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = -3
Query: 447 DNRDGCDKRDG-----KRVSRMR-ERESWIVAREAAASARQRPDFQA 325
+ R+G D R+ KR + ++ E+E +VA EAA AR++ +++A
Sbjct: 1669 EQRNGADTREQFFNAEKRATLLQSEKEELLVANEAAERARKQAEYEA 1715
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Frame = -3
Query: 447 DNRDGCDKRDG-----KRVSRMR-ERESWIVAREAAASARQRPDFQA 325
+ R+G D R+ KR + ++ E+E +VA EAA AR++ +++A
Sbjct: 1672 EQRNGADTREQFFNAEKRATLLQSEKEELLVANEAAERARKQAEYEA 1718
>AF039053-7|AAC25873.3| 295|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 22 protein.
Length = 295
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 207 CIIVVFNLKR-RRCEQTHFLFYFNYTPLTQFEKLTNIILYRLCVRSSSDFEK 55
C I +FNLK+ + ++ LFYF + L F T + + + + S+ EK
Sbjct: 21 CFINIFNLKKLEKKKEDMVLFYFRFI-LDAFFGATILFFFAITISSNFSGEK 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,719,346
Number of Sequences: 27780
Number of extensions: 333886
Number of successful extensions: 1092
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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