Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J10
         (653 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.84 
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              24   1.5  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   2.6  
U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    23   3.4  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   4.5  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   4.5  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   6.0  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 0.84
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 311 ATSRTIGRSMSKCHNTLCFAC 249
           A  + IG+++SKCHN     C
Sbjct: 699 AEPQPIGKALSKCHNRNVTTC 719


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +1

Query: 298 VLLVAAVCICLEVGALPSRRSG 363
           +++++A+C+C+    L   +SG
Sbjct: 4   IVIISAICVCVSAMTLDELKSG 25


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 298 VLLVAAVCICLEVGAL 345
           +L+++A+CIC  VGAL
Sbjct: 4   ILIISAICIC--VGAL 17


>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = +2

Query: 422 RLSQPSRLSCLFSFSGPYKRCYIK 493
           R  QPSR    F F   YK  +IK
Sbjct: 81  RPGQPSRQHAGFEFGKEYKNGFIK 104


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/48 (22%), Positives = 23/48 (47%)
 Frame = +1

Query: 412 FSISLVAAITVIVPFFVLWAVQAMLYQDDEYNMXKRKMLASAKTAGLI 555
           F + + ++  + VP+  +   Q++ YQD +Y +   +     K  G I
Sbjct: 639 FLVVISSSNPLNVPYGPVIPEQSLTYQDQQYQVVSVEQYQQLKEQGQI 686


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -3

Query: 207 CIIVVFNLKRR 175
           CI +VFNL+RR
Sbjct: 202 CIQIVFNLRRR 212


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 409 TFSISLVAAITVIVPFFVLWAVQAMLYQDD 498
           T  I + A I   +PFFVL  V+  L   D
Sbjct: 373 TLGIIMSAFIVCWLPFFVLALVRPFLKNPD 402


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,754
Number of Sequences: 438
Number of extensions: 4482
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)