Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J10
         (653 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g19130.1 68415.m02233 S-locus lectin protein kinase family pr...    29   2.0  
At5g15680.1 68418.m01834 expressed protein                             29   2.7  
At3g04040.1 68416.m00426 expressed protein                             28   4.7  
At3g02600.1 68416.m00251 phosphatidic acid phosphatase family pr...    28   4.7  
At2g33750.2 68415.m04139 purine permease, putative (PUP2) simila...    28   6.2  
At2g33750.1 68415.m04138 purine permease, putative (PUP2) simila...    28   6.2  
At1g15080.1 68414.m01802 phosphatidic acid phosphatase family pr...    28   6.2  

>At2g19130.1 68415.m02233 S-locus lectin protein kinase family
           protein contains Pfam domains PF00954: S-locus
           glycoprotein family, PF00069: Protein kinase domain and
           PF01453: Lectin (probable mannose binding)
          Length = 828

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 275 ICSSTCQ*SCSLRQYAFAWKSGRC 346
           IC+S CQ  CS + YA+   S +C
Sbjct: 371 ICASACQGDCSCKAYAYDEGSSKC 394


>At5g15680.1 68418.m01834 expressed protein 
          Length = 2151

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 18/32 (56%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +3

Query: 417  HLACRSHHGYRAFFRSLGRTSDA-ISRRRIQH 509
            HLACRSH  YRA   S+  TSDA +S  R  H
Sbjct: 1699 HLACRSHQIYRALRPSV--TSDACVSLLRCLH 1728


>At3g04040.1 68416.m00426 expressed protein
          Length = 134

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +1

Query: 232 VPAVEMQAKHSVLWHLLIDLPIVLLVAAVCICLEVGALPS 351
           +P V    K  +  H L+  P V++V++ C  L  GA+P+
Sbjct: 59  MPIVRKWIKGPMWLHFLVGAPPVIVVSSACAGLAGGAVPA 98


>At3g02600.1 68416.m00251 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase [Mus musculus] GI:1487873; contains
           Pfam profile: PF01569 phosphatase PAP2 superfamily
          Length = 364

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 568 IYGAVVNLTILEVVKCVVGTPRPTFF 645
           +Y  +V   + + +K  VG PRP FF
Sbjct: 154 LYSVLVTAVLTDAIKNAVGRPRPDFF 179


>At2g33750.2 68415.m04139 purine permease, putative (PUP2) similar
           to purine permease [Arabidopsis thaliana] GI:7620007;
           contains Pfam profiles PF03151: Domain of unknown
           function, DUF250, PF00892: Integral membrane protein;
           identical to cDNA putative purine permease (PUP2) mRNA,
           partial cds GI:14388590
          Length = 347

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 232 VPAVEMQAKHS---VLWHLLIDLPIVLLVAAVCICLEVGAL 345
           +P VE+  K S   + + L ++  +VL  AA C+CL VG L
Sbjct: 187 LPLVELSYKKSGQRITYTLALEFQMVLCFAATCVCL-VGML 226


>At2g33750.1 68415.m04138 purine permease, putative (PUP2) similar
           to purine permease [Arabidopsis thaliana] GI:7620007;
           contains Pfam profiles PF03151: Domain of unknown
           function, DUF250, PF00892: Integral membrane protein;
           identical to cDNA putative purine permease (PUP2) mRNA,
           partial cds GI:14388590
          Length = 358

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = +1

Query: 232 VPAVEMQAKHS---VLWHLLIDLPIVLLVAAVCICLEVGAL 345
           +P VE+  K S   + + L ++  +VL  AA C+CL VG L
Sbjct: 187 LPLVELSYKKSGQRITYTLALEFQMVLCFAATCVCL-VGML 226


>At1g15080.1 68414.m01802 phosphatidic acid phosphatase family
           protein / PAP2 family protein similar to phosphatidic
           acid phosphatase 2a2 [Cavia porcellus] GI:3641336;
           contains Pfam profile PF01569 PAP2 superfamily
          Length = 290

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 23/87 (26%), Positives = 39/87 (44%)
 Frame = +1

Query: 385 LSFPHTGDTFSISLVAAITVIVPFFVLWAVQAMLYQDDEYNMXKRKMLASAKTAGLIYRD 564
           L +P   +T     V  I V++PF V+     +  ++D Y++    +       GL++  
Sbjct: 57  LRYPLQDNTIPFWAVPLIAVVLPFAVICVYYFI--RNDVYDLHHAIL-------GLLFSV 107

Query: 565 YIYGAVVNLTILEVVKCVVGTPRPTFF 645
            I G +      + +K  VG PRP FF
Sbjct: 108 LITGVIT-----DAIKDAVGRPRPDFF 129


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,646,825
Number of Sequences: 28952
Number of extensions: 303210
Number of successful extensions: 865
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)