BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_J08 (654 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_53825| Best HMM Match : No HMM Matches (HMM E-Value=.) 245 3e-65 SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06 SB_47421| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9 SB_2925| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5 SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3 SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4 SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8 SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 5.8 >SB_53825| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 182 Score = 245 bits (599), Expect = 3e-65 Identities = 115/174 (66%), Positives = 140/174 (80%) Frame = +1 Query: 133 MVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANK 312 MVRKLKFHE KLLKKV FISWK DNNI EVKV++K+ IQKREDYTKYNKLS I+ LANK Sbjct: 1 MVRKLKFHEQKLLKKVDFISWKSDNNIREVKVLRKYHIQKREDYTKYNKLSGLIKSLANK 60 Query: 313 IKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMS 492 IKDLDP + +R E++ Q+LEKL+ +GLI T+ +L V+ASSFCRRRLPV+MV KM+ Sbjct: 61 IKDLDPKDPYRVEATEQILEKLHNMGLISTKKNLGQCNKVNASSFCRRRLPVVMVNLKMA 120 Query: 493 XTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654 +K+A K+IEQ HV VGPEV+ DPAFLV +++EDFVTW D S I KHV+ YN+ Sbjct: 121 QVVKDAVKYIEQGHVRVGPEVIMDPAFLVAKNMEDFVTWTDTSKIRKHVMEYND 174 >SB_46749| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 190 Score = 48.0 bits (109), Expect = 7e-06 Identities = 29/122 (23%), Positives = 60/122 (49%), Gaps = 1/122 (0%) Frame = +1 Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396 E+K++ ++ ++ + + + IR+ A ++ L+ + R LL +L +IG++ Sbjct: 25 ELKIIGEYGLRNKREVWRVKLTLAKIRKAARELLTLEEKDPRRLFEGNALLRRLVRIGVL 84 Query: 397 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573 +R L + F RRL + + ++ +I A I QRH+ V ++V P+F Sbjct: 85 DESRKKLDYVLGLRIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQLVNVPSF 144 Query: 574 LV 579 +V Sbjct: 145 VV 146 >SB_47421| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 323 Score = 29.9 bits (64), Expect = 1.9 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = -1 Query: 291 ITRQFVILCVILTLLYTKLFHNLHFTNI 208 I+R + +CV++ LY +F LHF NI Sbjct: 128 ISRPRITICVVVIWLYFSVFSVLHFVNI 155 >SB_2925| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 176 Score = 29.5 bits (63), Expect = 2.5 Identities = 21/55 (38%), Positives = 29/55 (52%) Frame = -2 Query: 353 DSVLNSLFGSRSFILFASSLISRDNLLYFV*SSRFCIQNFFITFTSLILLSNFHD 189 D V S + SR F +LI N L FV SR+ + F+ +LIL+SN+ D Sbjct: 31 DLVFVSRYASRRFYHAEMALILASNDLDFV--SRYASRCFYHAEMALILISNYLD 83 >SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2656 Score = 29.5 bits (63), Expect = 2.5 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Frame = +1 Query: 445 FCRRRLPVLMVRNKMSXTIKEATKFIE-QRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGS 621 +C R+ +L + TI+ E QR+ GP +V P ++ +F +W D + Sbjct: 593 WCNRQNSILADEMGLGKTIQSIAFLFEMQRYGIRGPNLVIAPLSTISNWQREFESWNDIN 652 Query: 622 AITKH 636 A+ H Sbjct: 653 AVVYH 657 >SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 582 Score = 29.1 bits (62), Expect = 3.3 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = +1 Query: 190 SWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLL 369 S KL+ + ++ +CI K + + L+R EL +I +P+N AQ+L Sbjct: 400 SIKLNPDFIPARIQLAYCIYKTAVFQQNAVLARGALELFEEISTNNPDNPDALSLHAQVL 459 Query: 370 EKLYQIGLIPTRWDLAL 420 ++ Q ++D A+ Sbjct: 460 QEQGQFEEACEKFDTAI 476 >SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1218 Score = 28.7 bits (61), Expect = 4.4 Identities = 21/81 (25%), Positives = 38/81 (46%) Frame = +1 Query: 136 VRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANKI 315 V +L+ + +LL++ ++D SE + + K+ K + DI+EL K Sbjct: 429 VNQLEREKSRLLEENAEFKVRMDELESEKSELSDSVLNKQRQLLKAEE---DIKELTLKD 485 Query: 316 KDLDPNNEFRTESSAQLLEKL 378 ++LD E R QL E++ Sbjct: 486 QELDVTVELRGAEKQQLEEEI 506 >SB_56694| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 409 Score = 28.3 bits (60), Expect = 5.8 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 318 FYLVCELSDITRQFVILCVILTLLYTKLFHNLHFTNIVIQLP 193 FYL +L +T FV+ I LL + L FT +V Q P Sbjct: 45 FYLFRDLRTVTNYFVVSLAIADLLVGFVSMPLWFTYLVFQWP 86 >SB_44656| Best HMM Match : 7tm_1 (HMM E-Value=0) Length = 409 Score = 28.3 bits (60), Expect = 5.8 Identities = 16/42 (38%), Positives = 21/42 (50%) Frame = -1 Query: 318 FYLVCELSDITRQFVILCVILTLLYTKLFHNLHFTNIVIQLP 193 FYL +L +T FV+ I LL + L FT +V Q P Sbjct: 45 FYLFRDLRTVTNYFVVSLAIADLLVGFVSMPLWFTYLVFQWP 86 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,917,279 Number of Sequences: 59808 Number of extensions: 361504 Number of successful extensions: 907 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 844 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 904 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1669334250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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