Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J08
(654 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 223 4e-58
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 223 6e-58
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 223 6e-58
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 223 6e-58
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 223 6e-58
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 49 2e-05
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 48 3e-05
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 46 2e-04
AB051628-1|BAB54955.1| 30|Homo sapiens mitochondrial ribosomal... 40 0.010
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 39 0.014
BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein... 32 2.1
AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein... 32 2.1
AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein... 32 2.1
AL136218-2|CAI10815.1| 132|Homo sapiens calcium binding protein... 32 2.1
AY358410-1|AAQ88776.1| 296|Homo sapiens SLAP protein. 31 4.7
BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein. 30 6.3
BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein. 30 6.3
BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein. 30 6.3
BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein. 30 6.3
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 30 6.3
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 30 6.3
AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein. 30 6.3
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 30 6.3
AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens ... 30 6.3
AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein. 30 6.3
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 223 bits (545), Expect = 4e-58
Identities = 100/175 (57%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Frame = +1
Query: 133 MVRKLKFHEGKLLKKVXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELAN 309
MVRKLKFHE KLLK+V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA
Sbjct: 1 MVRKLKFHEQKLLKRVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 310 KIKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKM 489
+++DL ++FR +SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M
Sbjct: 61 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 490 SXTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654
+ ++ A F+EQ HV VGP+VV DPAFLV RS+EDFVTWVD S I +HVL YNE
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNE 175
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 223 bits (544), Expect = 6e-58
Identities = 100/175 (57%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Frame = +1
Query: 133 MVRKLKFHEGKLLKKVXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELAN 309
MVRKLKFHE KLLK+V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 310 KIKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKM 489
+++DL ++FR +SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M
Sbjct: 61 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 490 SXTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654
+ ++ A F+EQ HV VGP+VV DPAFLV RS+EDFVTWVD S I +HVL YNE
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNE 175
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 223 bits (544), Expect = 6e-58
Identities = 100/175 (57%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Frame = +1
Query: 133 MVRKLKFHEGKLLKKVXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELAN 309
MVRKLKFHE KLLK+V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 310 KIKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKM 489
+++DL ++FR +SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M
Sbjct: 61 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 490 SXTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654
+ ++ A F+EQ HV VGP+VV DPAFLV RS+EDFVTWVD S I +HVL YNE
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNE 175
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 223 bits (544), Expect = 6e-58
Identities = 100/175 (57%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Frame = +1
Query: 133 MVRKLKFHEGKLLKKVXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELAN 309
MVRKLKFHE KLLK+V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 310 KIKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKM 489
+++DL ++FR +SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M
Sbjct: 61 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 490 SXTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654
+ ++ A F+EQ HV VGP+VV DPAFLV RS+EDFVTWVD S I +HVL YNE
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNE 175
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 223 bits (544), Expect = 6e-58
Identities = 100/175 (57%), Positives = 140/175 (80%), Gaps = 1/175 (0%)
Frame = +1
Query: 133 MVRKLKFHEGKLLKKVXFISWKL-DNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELAN 309
MVRKLKFHE KLLK+V F++W++ D+N+ E++V++++ +Q+REDYT+YN+LSR +RELA
Sbjct: 1 MVRKLKFHEQKLLKQVDFLNWEVTDHNLHELRVLRRYRLQRREDYTRYNQLSRAVRELAR 60
Query: 310 KIKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKM 489
+++DL ++FR +SA LL+KLY +GL+PTR L L V+ASSFCRRRLP ++++ +M
Sbjct: 61 RLRDLPERDQFRVRASAALLDKLYALGLVPTRGSLELCDFVTASSFCRRRLPTVLLKLRM 120
Query: 490 SXTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654
+ ++ A F+EQ HV VGP+VV DPAFLV RS+EDFVTWVD S I +HVL YNE
Sbjct: 121 AQHLQAAVAFVEQGHVRVGPDVVTDPAFLVTRSMEDFVTWVDSSKIKRHVLEYNE 175
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.8 bits (111), Expect = 2e-05
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L +IG++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 48.0 bits (109), Expect = 3e-05
Identities = 29/122 (23%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD + R LL +L ++G++
Sbjct: 28 ELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRLGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 45.6 bits (103), Expect = 2e-04
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K+++++ ++ + + + IR+ A ++ LD + R LL +L IG++
Sbjct: 28 ELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKDPRRLFEGNALLWRLVCIGVL 87
Query: 397 PT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+ L + F RRL + + ++ +I A I QRH V +VV P+F
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSF 147
Query: 574 LV 579
+V
Sbjct: 148 IV 149
>AB051628-1|BAB54955.1| 30|Homo sapiens mitochondrial ribosomal
protein S4 protein.
Length = 30
Score = 39.5 bits (88), Expect = 0.010
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1
Query: 592 EDFVTWVDGSAITKHVLXYNE 654
EDFVTWVD S I +HVL YNE
Sbjct: 1 EDFVTWVDSSKIKRHVLEYNE 21
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 39.1 bits (87), Expect = 0.014
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = +1
Query: 325 DPNNEFRTESSAQLLEKLYQIGLIPT-RWDLALATNVSASSFCRRRLPVLMVRNKMSXTI 501
DP F E +A LL +L +IG++ + L + F RRL + + ++ +I
Sbjct: 6 DPRRLF--EGNA-LLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSI 62
Query: 502 KEATKFIEQRHVXVGPEVVKDPAFLV 579
A I QRH+ V +VV P+F+V
Sbjct: 63 HHARVLIRQRHIRVRKQVVNIPSFIV 88
>BC010993-1|AAH10993.2| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 169 LKKVXFISWKLDNNISEVKVMK-KFCIQKREDYTKYNKLSRDIRELANKIKDL---DPNN 336
+KK+ S N VK++K I +++D K +K S ++ + +K++
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQD-KKTDKASEEVSKSLQAMKEILCGTNEK 59
Query: 337 EFRTESSAQLLEKLYQIGLIPT 402
E TE+ AQL ++LY GL+ T
Sbjct: 60 EPPTEAVAQLAQELYSSGLLVT 81
>AL138875-4|CAI10893.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 169 LKKVXFISWKLDNNISEVKVMK-KFCIQKREDYTKYNKLSRDIRELANKIKDL---DPNN 336
+KK+ S N VK++K I +++D K +K S ++ + +K++
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQD-KKTDKASEEVSKSLQAMKEILCGTNEK 59
Query: 337 EFRTESSAQLLEKLYQIGLIPT 402
E TE+ AQL ++LY GL+ T
Sbjct: 60 EPPTEAVAQLAQELYSSGLLVT 81
>AL136218-3|CAI10816.1| 337|Homo sapiens calcium binding protein
39-like protein.
Length = 337
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 169 LKKVXFISWKLDNNISEVKVMK-KFCIQKREDYTKYNKLSRDIRELANKIKDL---DPNN 336
+KK+ S N VK++K I +++D K +K S ++ + +K++
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQD-KKTDKASEEVSKSLQAMKEILCGTNEK 59
Query: 337 EFRTESSAQLLEKLYQIGLIPT 402
E TE+ AQL ++LY GL+ T
Sbjct: 60 EPPTEAVAQLAQELYSSGLLVT 81
>AL136218-2|CAI10815.1| 132|Homo sapiens calcium binding protein
39-like protein.
Length = 132
Score = 31.9 bits (69), Expect = 2.1
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +1
Query: 169 LKKVXFISWKLDNNISEVKVMK-KFCIQKREDYTKYNKLSRDIRELANKIKDL---DPNN 336
+KK+ S N VK++K I +++D K +K S ++ + +K++
Sbjct: 1 MKKMPLFSKSHKNPAEIVKILKDNLAILEKQD-KKTDKASEEVSKSLQAMKEILCGTNEK 59
Query: 337 EFRTESSAQLLEKLYQIGLIPT 402
E TE+ AQL ++LY GL+ T
Sbjct: 60 EPPTEAVAQLAQELYSSGLLVT 81
>AY358410-1|AAQ88776.1| 296|Homo sapiens SLAP protein.
Length = 296
Score = 30.7 bits (66), Expect = 4.7
Identities = 30/143 (20%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Frame = +1
Query: 136 VRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFCIQKREDY----TKYNKLSRDIREL 303
+R++ + ++++K+ + L N E +K+ + +E+ KYN +I++L
Sbjct: 126 LRRVLQEKIEVVRKLSEVERSLSNTEDECTHLKEMNERTQEELRELANKYNGAVNEIKDL 185
Query: 304 ANKIKDLD-PNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSA----SSFCRRRLPV 468
++K+K + E + + A+ E ++I + + + L + A + F RL
Sbjct: 186 SDKLKVAEGKQEEIQQKGQAEKKELQHKIDEMEEK-EQELQAKIEALQADNDFTNERLTA 244
Query: 469 LMVR--NKMSXTIKEATKFIEQR 531
L VR + T+KE + ++R
Sbjct: 245 LQVRLEHLQEKTLKECSSLADRR 267
>BC106017-1|AAI06018.1| 867|Homo sapiens SETX protein protein.
Length = 867
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 258 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 316
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 317 ASKIKEV 323
>BC078166-1|AAH78166.1| 917|Homo sapiens SETX protein protein.
Length = 917
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 308 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 366
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 367 ASKIKEV 373
>BC032622-1|AAH32622.2| 1030|Homo sapiens SETX protein protein.
Length = 1030
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 421 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 479
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 480 ASKIKEV 486
>BC032600-1|AAH32600.1| 828|Homo sapiens SETX protein protein.
Length = 828
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 219 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 277
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 278 ASKIKEV 284
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 2068 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 2126
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 2127 ASKIKEV 2133
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 2068 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 2126
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 2127 ASKIKEV 2133
>AL159997-5|CAI40857.1| 948|Homo sapiens senataxin protein.
Length = 948
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 310 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 368
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 369 ASKIKEV 375
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 2068 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 2126
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 2127 ASKIKEV 2133
>AK001456-1|BAA91701.1| 828|Homo sapiens protein ( Homo sapiens
cDNA FLJ10594 fis, clone NT2RP2004689. ).
Length = 828
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 219 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 277
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 278 ASKIKEV 284
>AB014525-1|BAA31600.2| 2663|Homo sapiens KIAA0625 protein protein.
Length = 2663
Score = 30.3 bits (65), Expect = 6.3
Identities = 19/67 (28%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = +1
Query: 130 KMVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFC--IQKREDYTKYNKLSRDIREL 303
+M ++L H + K+ F+ ++LD +S + + + IQ++E +K+S++ +EL
Sbjct: 2054 RMKKELPSHVQAMHKRKEFLDYQLDE-LSRQRALCRGGREIQRQELDENISKVSKERQEL 2112
Query: 304 ANKIKDL 324
A+KIK++
Sbjct: 2113 ASKIKEV 2119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,273,008
Number of Sequences: 237096
Number of extensions: 1728895
Number of successful extensions: 3369
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3364
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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