Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J08
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p pro... 228 4e-60
AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA... 228 4e-60
AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD... 54 1e-07
AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA... 54 1e-07
AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p pro... 44 2e-04
AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB... 44 2e-04
X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein. 29 4.2
S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein. 29 4.2
L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein. 29 4.2
BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p pro... 29 4.2
BT015974-1|AAV36859.1| 836|Drosophila melanogaster RE74713p pro... 29 4.2
AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p pro... 29 4.2
AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA... 29 4.2
AE013599-2255|AAF58013.3| 714|Drosophila melanogaster CG8048-PD... 29 4.2
>AY071534-1|AAL49156.1| 181|Drosophila melanogaster RE57564p
protein.
Length = 181
Score = 228 bits (558), Expect = 4e-60
Identities = 108/174 (62%), Positives = 135/174 (77%)
Frame = +1
Query: 133 MVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANK 312
MVRKLKFHE KLLKKV FI+WK+DN E K++++F IQKREDYTKYNKLSR+IRELA +
Sbjct: 1 MVRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAER 60
Query: 313 IKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMS 492
I LD + F+TE++ LL KL+ +G+ + L A +SAS FCRRRLPV+MV+ +MS
Sbjct: 61 IAKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMS 120
Query: 493 XTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654
+K AT IE HV VGPE++KDPAFLV+R+LEDFVTWVDGS I +HVL YN+
Sbjct: 121 EHLKAATDLIEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYND 174
>AE013599-2494|AAF57847.2| 181|Drosophila melanogaster CG4866-PA
protein.
Length = 181
Score = 228 bits (558), Expect = 4e-60
Identities = 108/174 (62%), Positives = 135/174 (77%)
Frame = +1
Query: 133 MVRKLKFHEGKLLKKVXFISWKLDNNISEVKVMKKFCIQKREDYTKYNKLSRDIRELANK 312
MVRKLKFHE KLLKKV FI+WK+DN E K++++F IQKREDYTKYNKLSR+IRELA +
Sbjct: 1 MVRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAER 60
Query: 313 IKDLDPNNEFRTESSAQLLEKLYQIGLIPTRWDLALATNVSASSFCRRRLPVLMVRNKMS 492
I LD + F+TE++ LL KL+ +G+ + L A +SAS FCRRRLPV+MV+ +MS
Sbjct: 61 IAKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMS 120
Query: 493 XTIKEATKFIEQRHVXVGPEVVKDPAFLVNRSLEDFVTWVDGSAITKHVLXYNE 654
+K AT IE HV VGPE++KDPAFLV+R+LEDFVTWVDGS I +HVL YN+
Sbjct: 121 EHLKAATDLIEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYND 174
>AE014296-1680|AAN11946.1| 195|Drosophila melanogaster CG3395-PD,
isoform D protein.
Length = 195
Score = 54.4 bits (125), Expect = 1e-07
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD +E R LL +L +IG++
Sbjct: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88
Query: 397 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+R L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 89 DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 148
Query: 574 LV 579
+V
Sbjct: 149 VV 150
>AE014296-1679|AAF50249.1| 195|Drosophila melanogaster CG3395-PA,
isoform A protein.
Length = 195
Score = 54.4 bits (125), Expect = 1e-07
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD +E R LL +L +IG++
Sbjct: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88
Query: 397 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHVXVGPEVVKDPAF 573
+R L + F RRL + + ++ +I A I QRH+ V +VV P+F
Sbjct: 89 DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 148
Query: 574 LV 579
+V
Sbjct: 149 VV 150
>AY061396-1|AAL28944.1| 137|Drosophila melanogaster LD32106p
protein.
Length = 137
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD +E R LL +L +IG++
Sbjct: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88
Query: 397 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHV 537
+R L + F RRL + + ++ +I A I QRH+
Sbjct: 89 DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 136
>AE014296-1681|AAF50250.1| 137|Drosophila melanogaster CG3395-PB,
isoform B protein.
Length = 137
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/108 (24%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Frame = +1
Query: 217 EVKVMKKFCIQKREDYTKYNKLSRDIRELANKIKDLDPNNEFRTESSAQLLEKLYQIGLI 396
E+K++ ++ ++ + + + IR+ A ++ LD +E R LL +L +IG++
Sbjct: 29 ELKIIGEYGLRNKREVWRVKYALAKIRKAARELLTLDEKDEKRLFQGNALLRRLVRIGVL 88
Query: 397 P-TRWDLALATNVSASSFCRRRLPVLMVRNKMSXTIKEATKFIEQRHV 537
+R L + F RRL + + ++ +I A I QRH+
Sbjct: 89 DESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHI 136
>X68309-2|CAA48386.1| 802|Drosophila melanogaster ERCC3 protein.
Length = 802
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 484 KMSXTIKEATKFIEQRHVXVGPEVVKDPAF----LVNRSLEDFVT-WVDGSAITK 633
K+ +K FIE H V +++KDP L+ EDF+ +DG AIT+
Sbjct: 175 KVKLVLKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEDFIQGTLDGKAITQ 229
>S50517-1|AAA12421.1| 802|Drosophila melanogaster ERCC3Dm protein.
Length = 802
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 484 KMSXTIKEATKFIEQRHVXVGPEVVKDPAF----LVNRSLEDFVT-WVDGSAITK 633
K+ +K FIE H V +++KDP L+ EDF+ +DG AIT+
Sbjct: 175 KVKLVLKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEDFIQGTLDGKAITQ 229
>L02965-1|AAA74931.1| 801|Drosophila melanogaster helicase protein.
Length = 801
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 484 KMSXTIKEATKFIEQRHVXVGPEVVKDPAF----LVNRSLEDFVT-WVDGSAITK 633
K+ +K FIE H V +++KDP L+ EDF+ +DG AIT+
Sbjct: 175 KVKLVLKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEDFIQGTLDGKAITQ 229
>BT025199-1|ABF17890.1| 798|Drosophila melanogaster FI01118p
protein.
Length = 798
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 484 KMSXTIKEATKFIEQRHVXVGPEVVKDPAF----LVNRSLEDFVT-WVDGSAITK 633
K+ +K FIE H V +++KDP L+ EDF+ +DG AIT+
Sbjct: 175 KVKLVLKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEDFIQGTLDGKAITQ 229
>BT015974-1|AAV36859.1| 836|Drosophila melanogaster RE74713p
protein.
Length = 836
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 635 CFVIAEPSTHVTKSSSDLLTRNAGSFTTSGPTXTCRCSINFVASL 501
CF A PST T +S LL S T S RC+++ VA++
Sbjct: 212 CFACAPPSTSAT--ASTLLADECYSQTASSMLSATRCALSTVAAI 254
>AY051975-1|AAK93399.1| 798|Drosophila melanogaster LD44022p
protein.
Length = 798
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 484 KMSXTIKEATKFIEQRHVXVGPEVVKDPAF----LVNRSLEDFVT-WVDGSAITK 633
K+ +K FIE H V +++KDP L+ EDF+ +DG AIT+
Sbjct: 175 KVKLVLKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEDFIQGTLDGKAITQ 229
>AE014296-1828|AAF50150.1| 798|Drosophila melanogaster CG8019-PA
protein.
Length = 798
Score = 29.5 bits (63), Expect = 4.2
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 5/55 (9%)
Frame = +1
Query: 484 KMSXTIKEATKFIEQRHVXVGPEVVKDPAF----LVNRSLEDFVT-WVDGSAITK 633
K+ +K FIE H V +++KDP L+ EDF+ +DG AIT+
Sbjct: 175 KVKLVLKHNKYFIESPHPEVLQKLLKDPVIQKCRLIRSEGEDFIQGTLDGKAITQ 229
>AE013599-2255|AAF58013.3| 714|Drosophila melanogaster CG8048-PD,
isoform D protein.
Length = 714
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 635 CFVIAEPSTHVTKSSSDLLTRNAGSFTTSGPTXTCRCSINFVASL 501
CF A PST T +S LL S T S RC+++ VA++
Sbjct: 212 CFACAPPSTSAT--ASTLLADECYSQTASSMLSATRCALSTVAAI 254
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,158,551
Number of Sequences: 53049
Number of extensions: 525363
Number of successful extensions: 1505
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1440
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1499
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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