Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J06
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    72   1e-14

>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 72.1 bits (169), Expect = 1e-14
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = +3

Query: 87  EVADSKTATETLFIIDNIVYDVHKFLDEHPGGHEVLINVAGKDASEEFEDVGHSMDAR 260
           +V    T   T  +I N +YDV +FL+EHPGG EVL+  AG++A+E FEDVGHS DAR
Sbjct: 11  DVKSHNTNKSTWIVIHNDIYDVTEFLNEHPGGEEVLLEQAGREATEAFEDVGHSSDAR 68



 Score = 27.9 bits (59), Expect = 0.29
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +1

Query: 265 LMKGYVVGELVDADK--VPISKKQYSWEDTAKTSETEASFVNSWKFPVXXXXXXXXXYSY 438
           +MK + VGEL++A++  +P+ KK+  W    K  + + + +  W  P+         Y +
Sbjct: 70  MMKKFKVGELIEAERKQIPV-KKEPDW----KMDQQDDNQLKQWIVPLILGLLATILYRF 124

Query: 439 IF 444
            F
Sbjct: 125 YF 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 532,928
Number of Sequences: 2352
Number of extensions: 8730
Number of successful extensions: 23
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)