Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J06
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical pr... 74 8e-14
Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical pr... 63 1e-10
AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical ... 62 3e-10
AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical ... 39 0.003
AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical ... 39 0.003
Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical pr... 35 0.057
U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeas... 30 1.6
DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar prot... 30 1.6
AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin for... 30 1.6
AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin for... 30 1.6
AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protei... 30 1.6
AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protei... 30 1.6
Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical p... 27 8.6
Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 27 8.6
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 27 8.6
>Z78539-6|CAB01732.2| 134|Caenorhabditis elegans Hypothetical
protein C31E10.7 protein.
Length = 134
Score = 74.1 bits (174), Expect = 8e-14
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +3
Query: 87 EVADSKTATETLFIIDNIVYDVHKFLDEHPGGHEVLINVAGKDASEEFEDVGHSMDAR 260
E+A+ T +I N V+DV KFLDEHPGG EVL+ AG D +E FEDVGHS DAR
Sbjct: 11 EIAEHNTNKSAWLVIGNKVFDVTKFLDEHPGGCEVLLEQAGSDGTEAFEDVGHSTDAR 68
>Z81052-7|CAJ58492.1| 103|Caenorhabditis elegans Hypothetical
protein D2023.1b protein.
Length = 103
Score = 63.3 bits (147), Expect = 1e-10
Identities = 28/45 (62%), Positives = 34/45 (75%)
Frame = +3
Query: 126 IIDNIVYDVHKFLDEHPGGHEVLINVAGKDASEEFEDVGHSMDAR 260
I+ N VYDV KF+D HPGG E+L+ AG DA++ FE VGHSM AR
Sbjct: 23 IVGNYVYDVTKFVDLHPGGPEILLEFAGGDATDAFESVGHSMCAR 67
>AF003141-8|AAK21480.1| 141|Caenorhabditis elegans Hypothetical
protein W02D3.1 protein.
Length = 141
Score = 62.1 bits (144), Expect = 3e-10
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +3
Query: 126 IIDNIVYDVHKFLDEHPGGHEVLINVAGKDASEEFEDVGHSMDA 257
+I VYDV KFL+EHPGG EV+ +AGKDA+ F DVGHS DA
Sbjct: 27 VISGKVYDVTKFLNEHPGGEEVITQLAGKDATVGFLDVGHSKDA 70
>AL032654-5|CAD91715.2| 516|Caenorhabditis elegans Hypothetical
protein Y52B11A.3b protein.
Length = 516
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 138 IVYDVHKFLDEHPGGHEVLINVAGKDASEEF 230
IVYDV K+LD HPGG L+ AG+DA+ F
Sbjct: 42 IVYDVTKYLDFHPGGIPELLRGAGRDATPLF 72
>AL032654-4|CAA21721.2| 552|Caenorhabditis elegans Hypothetical
protein Y52B11A.3a protein.
Length = 552
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +3
Query: 138 IVYDVHKFLDEHPGGHEVLINVAGKDASEEF 230
IVYDV K+LD HPGG L+ AG+DA+ F
Sbjct: 78 IVYDVTKYLDFHPGGIPELLRGAGRDATPLF 108
>Z81038-3|CAB02759.1| 316|Caenorhabditis elegans Hypothetical
protein C25A1.5 protein.
Length = 316
Score = 34.7 bits (76), Expect = 0.057
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 129 IDNIVYDVHKFLDEHPGGHEVLINVAGKDASEEFEDVGHSMDARXTH 269
+D YD+ F +HPGG +VL +AG++ E M R H
Sbjct: 15 LDGQYYDIADFAPKHPGGAKVLNRLAGEEIGEFIRGEKRIMGVRHEH 61
>U53332-5|AAK31535.2| 821|Caenorhabditis elegans Related to yeast
vacuolar proteinsorting factor protein 35 protein.
Length = 821
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -2
Query: 233 LELLGGVLAGDV---DEHLVSAGMLVQKFMHIVDDIIDDEERLRC-GLTIGDLVR 81
L L G + A V D H V + + + DD++D +R+RC LT+G L++
Sbjct: 601 LYLNGAITADRVPFEDNHTVVYEFVSKALSILEDDVVDSRDRVRCLHLTVGTLLK 655
>DQ178636-1|ABD75715.1| 826|Caenorhabditis elegans vacuolar protein
sorting factor protein.
Length = 826
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Frame = -2
Query: 233 LELLGGVLAGDV---DEHLVSAGMLVQKFMHIVDDIIDDEERLRC-GLTIGDLVR 81
L L G + A V D H V + + + DD++D +R+RC LT+G L++
Sbjct: 606 LYLNGAITADRVPFEDNHTVVYEFVSKALSILEDDVVDSRDRVRCLHLTVGTLLK 660
>AF148954-1|AAD37411.1| 4280|Caenorhabditis elegans myotactin form A
protein.
Length = 4280
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 244 TAWTPGXLMKGYVVGELVDADKVPI--SKKQYSWEDTAKTSETEASFVNSWK 393
+AWTP K GEL+ V K SW T++ SFV WK
Sbjct: 1084 SAWTPAAQTKTPPGGELIIGPDVSYRQGKPIISWRSKENTNDLIESFVLEWK 1135
>AF148953-1|AAD37410.1| 4450|Caenorhabditis elegans myotactin form B
protein.
Length = 4450
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 244 TAWTPGXLMKGYVVGELVDADKVPI--SKKQYSWEDTAKTSETEASFVNSWK 393
+AWTP K GEL+ V K SW T++ SFV WK
Sbjct: 1084 SAWTPAAQTKTPPGGELIIGPDVSYRQGKPIISWRSKENTNDLIESFVLEWK 1135
>AF040648-5|AAK21413.1| 4450|Caenorhabditis elegans Lethal protein
805, isoform b protein.
Length = 4450
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 244 TAWTPGXLMKGYVVGELVDADKVPI--SKKQYSWEDTAKTSETEASFVNSWK 393
+AWTP K GEL+ V K SW T++ SFV WK
Sbjct: 1084 SAWTPAAQTKTPPGGELIIGPDVSYRQGKPIISWRSKENTNDLIESFVLEWK 1135
>AF040648-4|AAK21414.2| 4280|Caenorhabditis elegans Lethal protein
805, isoform a protein.
Length = 4280
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 244 TAWTPGXLMKGYVVGELVDADKVPI--SKKQYSWEDTAKTSETEASFVNSWK 393
+AWTP K GEL+ V K SW T++ SFV WK
Sbjct: 1084 SAWTPAAQTKTPPGGELIIGPDVSYRQGKPIISWRSKENTNDLIESFVLEWK 1135
>Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical
protein H13N06.4b protein.
Length = 178
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 141 VYDVHKFLDEHPGGHEVLI 197
VYDV F+ HPGG ++L+
Sbjct: 105 VYDVTDFIAMHPGGDKILL 123
>Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical
protein H13N06.4a protein.
Length = 541
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3
Query: 141 VYDVHKFLDEHPGGHEVLI 197
VYDV F+ HPGG ++L+
Sbjct: 105 VYDVTDFIAMHPGGDKILL 123
>Z93782-3|CAB07855.1| 1294|Caenorhabditis elegans Hypothetical protein
C47A10.1 protein.
Length = 1294
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 147 DVHKFLDEHPGGHEVLINVAGKDAS 221
++HKF+DE P G+E + G S
Sbjct: 1148 NIHKFIDELPDGYETRVGEKGTQLS 1172
>Z81484-12|CAB03973.1| 1294|Caenorhabditis elegans Hypothetical
protein C47A10.1 protein.
Length = 1294
Score = 27.5 bits (58), Expect = 8.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 147 DVHKFLDEHPGGHEVLINVAGKDAS 221
++HKF+DE P G+E + G S
Sbjct: 1148 NIHKFIDELPDGYETRVGEKGTQLS 1172
>Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical
protein C18D1.1 protein.
Length = 645
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 259 LASMLWPTSSNSSEASLPATLMSTSCPP 176
LASM++PT+S ++E S +T S P
Sbjct: 158 LASMVFPTTSTATECSAASTTSSVDSAP 185
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +3
Query: 213 DASEEFEDVGHSMDARXTHEGLRGGRARRCRQSAHQQEAVQLGGHREDL----RDRGLLR 380
+A+E EDV ++ A+ HE LR G + + A +GG R + GL
Sbjct: 473 EAAETLEDV--ALRAKKQHEPLRSGAMGGIDEMSQSMMASTIGGSRNSMTTSTSQTGLKN 530
Query: 381 QLMEVPG 401
+LM G
Sbjct: 531 KLMNALG 537
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 27.5 bits (58), Expect = 8.6
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Frame = +3
Query: 213 DASEEFEDVGHSMDARXTHEGLRGGRARRCRQSAHQQEAVQLGGHREDL----RDRGLLR 380
+A+E EDV ++ A+ HE LR G + + A +GG R + GL
Sbjct: 473 EAAETLEDV--ALRAKKQHEPLRSGAMGGIDEMSQSMMASTIGGSRNSMTTSTSQTGLKN 530
Query: 381 QLMEVPG 401
+LM G
Sbjct: 531 KLMNALG 537
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,504,588
Number of Sequences: 27780
Number of extensions: 201116
Number of successful extensions: 650
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 650
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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