Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J05
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   5.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.9  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.9  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 82  AKFVSDYCKNWDKSGRE 132
           A  V D+C+N DK+ +E
Sbjct: 305 ANKVKDFCQNLDKAHQE 321


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = +1

Query: 565 NLFRXESERYSKLIVELNQEINEXTXWK 648
           N +R    RYS    +LN+ + +   W+
Sbjct: 543 NFYRKFCARYSAATQDLNKLLRKGEKWR 570


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +2

Query: 218 LKVSMIFFFVA*KETLKKIPFYPS*EK*LICMQMCHQ*YWISY 346
           +K   IFF     +      +YPS  K   C+ M  +  W+ Y
Sbjct: 19  VKYLNIFFITPWYDFPTNQKYYPSLAKCYACLLMVVKILWVIY 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,742
Number of Sequences: 336
Number of extensions: 2875
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)