Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J05
(653 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein. 113 5e-25
AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein. 113 5e-25
AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein. 113 5e-25
AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein. 75 2e-13
BC060509-1|AAH60509.1| 740|Homo sapiens deltex 3-like (Drosophi... 33 0.89
BC042191-1|AAH42191.1| 740|Homo sapiens deltex 3-like (Drosophi... 33 0.89
AY225123-1|AAP57517.1| 740|Homo sapiens B-lymphoma and BAL asso... 33 0.89
AF484416-1|AAL90859.1| 740|Homo sapiens rhysin 2 protein. 33 0.89
>Z82901-1|CAI42864.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 113 bits (272), Expect = 5e-25
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Frame = +1
Query: 94 SDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCGLKGNLKKD 273
+++ KNW+KSGR FL HL + + S F Q++Y+ +KGNLK +
Sbjct: 10 AEWIKNWEKSGRGEFL-HLCRILSENKS----HDSSTYRDFQQALYELSYHVIKGNLKHE 64
Query: 274 TVLSFLREITNLHADVPXXXXXXXXXXXAETSLDVQSDERAYFCYIVRELEPFISDKLLK 453
+ L +I+ D+P ET+ + +R YF +V +SD +LK
Sbjct: 65 QASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLK 124
Query: 454 EXLXIXTLQDAGTLK-NKNFYTKFIKIKTKLYYKQRKFNLFRXESERYSKLIVELNQEIN 630
E L TL+ G +K ++ F K +KIKTKL+YKQ+KFNL R E+E Y+KLI EL Q+++
Sbjct: 125 ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS 184
>AL030996-3|CAI42271.2| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 113 bits (272), Expect = 5e-25
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Frame = +1
Query: 94 SDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCGLKGNLKKD 273
+++ KNW+KSGR FL HL + + S F Q++Y+ +KGNLK +
Sbjct: 10 AEWIKNWEKSGRGEFL-HLCRILSENKS----HDSSTYRDFQQALYELSYHVIKGNLKHE 64
Query: 274 TVLSFLREITNLHADVPXXXXXXXXXXXAETSLDVQSDERAYFCYIVRELEPFISDKLLK 453
+ L +I+ D+P ET+ + +R YF +V +SD +LK
Sbjct: 65 QASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLK 124
Query: 454 EXLXIXTLQDAGTLK-NKNFYTKFIKIKTKLYYKQRKFNLFRXESERYSKLIVELNQEIN 630
E L TL+ G +K ++ F K +KIKTKL+YKQ+KFNL R E+E Y+KLI EL Q+++
Sbjct: 125 ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS 184
>AL023575-1|CAO03594.1| 1593|Homo sapiens THO complex 2 protein.
Length = 1593
Score = 113 bits (272), Expect = 5e-25
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
Frame = +1
Query: 94 SDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSGFSQSVYDFLLCGLKGNLKKD 273
+++ KNW+KSGR FL HL + + S F Q++Y+ +KGNLK +
Sbjct: 10 AEWIKNWEKSGRGEFL-HLCRILSENKS----HDSSTYRDFQQALYELSYHVIKGNLKHE 64
Query: 274 TVLSFLREITNLHADVPXXXXXXXXXXXAETSLDVQSDERAYFCYIVRELEPFISDKLLK 453
+ L +I+ D+P ET+ + +R YF +V +SD +LK
Sbjct: 65 QASNVLSDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSDTVLK 124
Query: 454 EXLXIXTLQDAGTLK-NKNFYTKFIKIKTKLYYKQRKFNLFRXESERYSKLIVELNQEIN 630
E L TL+ G +K ++ F K +KIKTKL+YKQ+KFNL R E+E Y+KLI EL Q+++
Sbjct: 125 ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS 184
>AF441770-1|AAM28436.1| 1478|Homo sapiens Tho2 protein.
Length = 1478
Score = 74.9 bits (176), Expect = 2e-13
Identities = 36/68 (52%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Frame = +1
Query: 430 FISDKLLKEXLXIXTLQDAGTLK-NKNFYTKFIKIKTKLYYKQRKFNLFRXESERYSKLI 606
F+SD +LKE L TL+ G +K ++ F K +KIKTKL+YKQ+KFNL R E+E Y+KLI
Sbjct: 2 FVSDTVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLI 61
Query: 607 VELNQEIN 630
EL Q+++
Sbjct: 62 AELGQDLS 69
>BC060509-1|AAH60509.1| 740|Homo sapiens deltex 3-like (Drosophila)
protein.
Length = 740
Score = 33.1 bits (72), Expect = 0.89
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 415 RELEPFISDKLLKEX---LXIXTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFRXES 585
+EL + L+KE L + QD + + F+KI KL+ N+ +S
Sbjct: 323 QELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEAFVKIPVKLFAANYMMNVIEVDS 382
Query: 586 ERYSKLIVELNQEINE 633
Y L EL QEI+E
Sbjct: 383 AHYKLLETELLQEISE 398
>BC042191-1|AAH42191.1| 740|Homo sapiens deltex 3-like (Drosophila)
protein.
Length = 740
Score = 33.1 bits (72), Expect = 0.89
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 415 RELEPFISDKLLKEX---LXIXTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFRXES 585
+EL + L+KE L + QD + + F+KI KL+ N+ +S
Sbjct: 323 QELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEAFVKIPVKLFAANYMMNVIEVDS 382
Query: 586 ERYSKLIVELNQEINE 633
Y L EL QEI+E
Sbjct: 383 AHYKLLETELLQEISE 398
>AY225123-1|AAP57517.1| 740|Homo sapiens B-lymphoma and BAL
associated protein protein.
Length = 740
Score = 33.1 bits (72), Expect = 0.89
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 415 RELEPFISDKLLKEX---LXIXTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFRXES 585
+EL + L+KE L + QD + + F+KI KL+ N+ +S
Sbjct: 323 QELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEAFVKIPVKLFAANYMMNVIEVDS 382
Query: 586 ERYSKLIVELNQEINE 633
Y L EL QEI+E
Sbjct: 383 AHYKLLETELLQEISE 398
>AF484416-1|AAL90859.1| 740|Homo sapiens rhysin 2 protein.
Length = 740
Score = 33.1 bits (72), Expect = 0.89
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +1
Query: 415 RELEPFISDKLLKEX---LXIXTLQDAGTLKNKNFYTKFIKIKTKLYYKQRKFNLFRXES 585
+EL + L+KE L + QD + + F+KI KL+ N+ +S
Sbjct: 323 QELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEAFVKIPVKLFAANYMMNVIEVDS 382
Query: 586 ERYSKLIVELNQEINE 633
Y L EL QEI+E
Sbjct: 383 AHYKLLETELLQEISE 398
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,982,703
Number of Sequences: 237096
Number of extensions: 1473848
Number of successful extensions: 2155
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2148
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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