Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J05
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass...    52   5e-07
Z70270-4|CAA94225.1|  615|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical pr...    28   6.7  
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p...    28   6.7  
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas...    27   8.8  

>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 213 protein.
          Length = 1437

 Score = 51.6 bits (118), Expect = 5e-07
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +1

Query: 523 IKIKTKLYYKQRKFNLFRXESERYSKLIVEL 615
           I++KTK+Y+KQ KFNLFR ESE YSKL+ EL
Sbjct: 100 IRLKTKVYFKQAKFNLFREESEGYSKLVTEL 130


>Z70270-4|CAA94225.1|  615|Caenorhabditis elegans Hypothetical
           protein C53D6.6 protein.
          Length = 615

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = -1

Query: 368 LVSASKIDMISNIIDGTSACKLVISLKKDKTVSFLRFPFRPQRRKS 231
           +V+    D  + ++DGT  CK++I    +KTV     P + Q++ S
Sbjct: 1   MVNLKYDDYFTPLVDGTRLCKILIGSGDNKTV--CGHPIKKQKKSS 44


>Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical
           protein M163.2 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 488 PASCNVXXCNXSFSNLSEINGSSSLT 411
           P  CNV  CN SF+N S+ +  S  T
Sbjct: 318 PYHCNVPNCNKSFTNASDRSKHSKRT 343


>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
           protein T08A9.1 protein.
          Length = 1330

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 439 QK*MAPALSQCSRNKPAHRFVHLGW 365
           +K  A  L  C+R    HRF+H GW
Sbjct: 121 RKVCAETLQMCARLVQQHRFLHKGW 145


>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
           protein 12 protein.
          Length = 1280

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +1

Query: 487 GTLKNKNFYTKFIKIKTKLYYKQRKFNLFRXESERYSKLIVELNQEI 627
           G +KN+ F T    ++T+  +++ KF +       +SK+ +   Q+I
Sbjct: 269 GQVKNELFETLKRMVETENKFEEHKFEIMNVSKLEFSKMDISSQQDI 315


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,040,887
Number of Sequences: 27780
Number of extensions: 255554
Number of successful extensions: 665
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)