BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_J05 (653 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g24706.1 68414.m03104 expressed protein 40 0.001 At1g10490.1 68414.m01181 expressed protein contains Pfam profile... 32 0.38 At1g53650.1 68414.m06105 RNA-binding protein, putative similar t... 31 0.51 At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative / leuc... 29 2.7 At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR... 28 4.7 At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR... 27 8.2 At3g14450.1 68416.m01831 RNA-binding protein, putative contains ... 27 8.2 At2g46880.2 68415.m05854 calcineurin-like phosphoesterase family... 27 8.2 At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family... 27 8.2 >At1g24706.1 68414.m03104 expressed protein Length = 1781 Score = 40.3 bits (90), Expect = 0.001 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%) Frame = +1 Query: 370 LDVQSDERAYFCYIVREL--EPFISDKLLKEXLXIXTLQDAGTLKNK--NFYTKFIKIKT 537 L + D+R+ + + L + +L +E L +A +K K + K +++ T Sbjct: 88 LTMSGDQRSRLIKLAKWLVESQTVPQRLFQERCEEEFLWEADMVKIKAQDLKGKEVRLNT 147 Query: 538 KLYYKQRKFNLFRXESERYSKL 603 +L Y+Q KFNL R ESE Y+KL Sbjct: 148 RLLYQQTKFNLLREESEGYAKL 169 >At1g10490.1 68414.m01181 expressed protein contains Pfam profile PF05127: Putative ATPase (DUF699) Length = 1028 Score = 31.9 bits (69), Expect = 0.38 Identities = 16/48 (33%), Positives = 26/48 (54%) Frame = +1 Query: 70 MGSYAKFVSDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSG 213 +G Y F+S ++ +GR L LK L Q +++ R P+ G +SG Sbjct: 401 LGPYLVFLSSTVSGYEGTGRSLSLKLLQQL-EEQSRAPVTGVEGSLSG 447 >At1g53650.1 68414.m06105 RNA-binding protein, putative similar to RNA-binding protein GB:AAA86641 GI:1174153 from [Arabidopsis thaliana] Length = 314 Score = 31.5 bits (68), Expect = 0.51 Identities = 16/53 (30%), Positives = 24/53 (45%) Frame = -1 Query: 260 FPFRPQRRKS*TL*ENPDIFPDFENSGVLCSSFVNCVKCFKNNSRPDLSQFLQ 102 +P R K+ L NP P E+ +CS + C KN + D++ F Q Sbjct: 194 YPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQ 246 >At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative / leucine--tRNA ligase, putative similar to SP|P36430 Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS) {Bacillus subtilis}; contains Pfam profile PF00133: tRNA synthetases class I (I, L, M and V) Length = 973 Score = 29.1 bits (62), Expect = 2.7 Identities = 11/36 (30%), Positives = 21/36 (58%) Frame = +1 Query: 19 YRWNNLLKTIXSPFIVTMGSYAKFVSDYCKNWDKSG 126 Y+WNN + I PF++ + YA +++ + W + G Sbjct: 848 YKWNNQPRGIIEPFVLLLSPYAPHMAE--ELWSRLG 881 >At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1183 Score = 28.3 bits (60), Expect = 4.7 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 Query: 71 WDPTQNSYLITVKTGTNLVENCS 139 WDPT+ Y++ TGT VE S Sbjct: 509 WDPTEIHYVLDSNTGTRRVEGLS 531 >At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR class), putative domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. Length = 1294 Score = 27.5 bits (58), Expect = 8.2 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +2 Query: 71 WDPTQNSYLITVKTGTNLVENCS*NI 148 WDP +L++ +GT LVE S N+ Sbjct: 509 WDPEDICHLLSENSGTQLVEGISLNL 534 >At3g14450.1 68416.m01831 RNA-binding protein, putative contains Pfam profile: PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (2 copies) Length = 327 Score = 27.5 bits (58), Expect = 8.2 Identities = 14/53 (26%), Positives = 23/53 (43%) Frame = -1 Query: 260 FPFRPQRRKS*TL*ENPDIFPDFENSGVLCSSFVNCVKCFKNNSRPDLSQFLQ 102 +P R K+ L NP P E+ +C+ + C K S+ D+ F + Sbjct: 207 YPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFE 259 >At2g46880.2 68415.m05854 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase Length = 327 Score = 27.5 bits (58), Expect = 8.2 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 40 KTIXSPFIVTMGSYAKFVS-DYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSG 213 K+I + +++ GSY K Y +W K+ ++ + +H +++ + EH+ F ++ G Sbjct: 193 KSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251 >At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family protein contains Pfam profile: PF00149 calcineurin-like phosphoesterase Length = 401 Score = 27.5 bits (58), Expect = 8.2 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 40 KTIXSPFIVTMGSYAKFVS-DYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSG 213 K+I + +++ GSY K Y +W K+ ++ + +H +++ + EH+ F ++ G Sbjct: 193 KSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,101,825 Number of Sequences: 28952 Number of extensions: 230688 Number of successful extensions: 524 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 517 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 524 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1363910256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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