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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_J05
         (653 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g24706.1 68414.m03104 expressed protein                             40   0.001
At1g10490.1 68414.m01181 expressed protein contains Pfam profile...    32   0.38 
At1g53650.1 68414.m06105 RNA-binding protein, putative similar t...    31   0.51 
At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative / leuc...    29   2.7  
At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR...    28   4.7  
At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR...    27   8.2  
At3g14450.1 68416.m01831 RNA-binding protein, putative contains ...    27   8.2  
At2g46880.2 68415.m05854 calcineurin-like phosphoesterase family...    27   8.2  
At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family...    27   8.2  

>At1g24706.1 68414.m03104 expressed protein
          Length = 1781

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
 Frame = +1

Query: 370 LDVQSDERAYFCYIVREL--EPFISDKLLKEXLXIXTLQDAGTLKNK--NFYTKFIKIKT 537
           L +  D+R+    + + L     +  +L +E      L +A  +K K  +   K +++ T
Sbjct: 88  LTMSGDQRSRLIKLAKWLVESQTVPQRLFQERCEEEFLWEADMVKIKAQDLKGKEVRLNT 147

Query: 538 KLYYKQRKFNLFRXESERYSKL 603
           +L Y+Q KFNL R ESE Y+KL
Sbjct: 148 RLLYQQTKFNLLREESEGYAKL 169


>At1g10490.1 68414.m01181 expressed protein contains Pfam profile
           PF05127: Putative ATPase (DUF699)
          Length = 1028

 Score = 31.9 bits (69), Expect = 0.38
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +1

Query: 70  MGSYAKFVSDYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSG 213
           +G Y  F+S     ++ +GR L LK L Q  +++ R P+    G +SG
Sbjct: 401 LGPYLVFLSSTVSGYEGTGRSLSLKLLQQL-EEQSRAPVTGVEGSLSG 447


>At1g53650.1 68414.m06105 RNA-binding protein, putative similar to
           RNA-binding protein GB:AAA86641 GI:1174153 from
           [Arabidopsis thaliana]
          Length = 314

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 16/53 (30%), Positives = 24/53 (45%)
 Frame = -1

Query: 260 FPFRPQRRKS*TL*ENPDIFPDFENSGVLCSSFVNCVKCFKNNSRPDLSQFLQ 102
           +P R    K+  L  NP   P  E+   +CS  + C    KN +  D++ F Q
Sbjct: 194 YPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQ 246


>At4g04350.1 68417.m00622 leucyl-tRNA synthetase, putative /
           leucine--tRNA ligase, putative similar to SP|P36430
           Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA
           ligase) (LeuRS) {Bacillus subtilis}; contains Pfam
           profile PF00133: tRNA synthetases class I (I, L, M and
           V)
          Length = 973

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 11/36 (30%), Positives = 21/36 (58%)
 Frame = +1

Query: 19  YRWNNLLKTIXSPFIVTMGSYAKFVSDYCKNWDKSG 126
           Y+WNN  + I  PF++ +  YA  +++  + W + G
Sbjct: 848 YKWNNQPRGIIEPFVLLLSPYAPHMAE--ELWSRLG 881


>At1g72840.1 68414.m08425 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1183

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +2

Query: 71  WDPTQNSYLITVKTGTNLVENCS 139
           WDPT+  Y++   TGT  VE  S
Sbjct: 509 WDPTEIHYVLDSNTGTRRVEGLS 531


>At5g17680.1 68418.m02072 disease resistance protein (TIR-NBS-LRR
           class), putative domain signature TIR-NBS-LRR exists,
           suggestive of a disease resistance protein.
          Length = 1294

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 71  WDPTQNSYLITVKTGTNLVENCS*NI 148
           WDP    +L++  +GT LVE  S N+
Sbjct: 509 WDPEDICHLLSENSGTQLVEGISLNL 534


>At3g14450.1 68416.m01831 RNA-binding protein, putative contains
           Pfam profile: PF00076 RNA recognition motif. (a.k.a.
           RRM, RBD, or RNP domain) (2 copies)
          Length = 327

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = -1

Query: 260 FPFRPQRRKS*TL*ENPDIFPDFENSGVLCSSFVNCVKCFKNNSRPDLSQFLQ 102
           +P R    K+  L  NP   P  E+   +C+  + C    K  S+ D+  F +
Sbjct: 207 YPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFE 259


>At2g46880.2 68415.m05854 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 327

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 40  KTIXSPFIVTMGSYAKFVS-DYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSG 213
           K+I + +++  GSY K     Y  +W K+ ++ + +H +++ + EH+   F ++    G
Sbjct: 193 KSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251


>At2g46880.1 68415.m05853 calcineurin-like phosphoesterase family
           protein contains Pfam profile: PF00149 calcineurin-like
           phosphoesterase
          Length = 401

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 14/59 (23%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 40  KTIXSPFIVTMGSYAKFVS-DYCKNWDKSGRELFLKHLTQFTKDEHRTPLFSKSGKMSG 213
           K+I + +++  GSY K     Y  +W K+ ++ + +H +++ + EH+   F ++    G
Sbjct: 193 KSILNLYLLDGGSYTKLDGFGYKYDWVKTSQQNWYEHTSKWLEMEHKRWPFPQNSTAPG 251


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,101,825
Number of Sequences: 28952
Number of extensions: 230688
Number of successful extensions: 524
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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