Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J02
(651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 212 4e-56
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 184 7e-48
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 156 2e-39
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 153 2e-38
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 130 1e-31
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 103 2e-23
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 92 6e-20
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 78 1e-15
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 45 8e-06
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 1.8
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 2.3
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 2.3
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 3.1
SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces... 26 4.1
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 4.1
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 5.4
SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 26 5.4
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 25 9.5
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 212 bits (517), Expect = 4e-56
Identities = 99/158 (62%), Positives = 109/158 (68%)
Frame = +3
Query: 123 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGD 302
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP FMLQGGD
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64
Query: 303 FTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDGRH 482
FT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNGSQFFITTV WLDG+H
Sbjct: 65 FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124
Query: 483 XXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQI 596
+E+ G SG T RIV CG +
Sbjct: 125 VVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 184 bits (449), Expect = 7e-48
Identities = 85/130 (65%), Positives = 96/130 (73%)
Frame = +3
Query: 93 NTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRV 272
N G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRV
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
Query: 273 IPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITT 452
IP FM+QGGD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+NGSQFFITT
Sbjct: 80 IPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITT 139
Query: 453 VKXSWLDGRH 482
VK WLDG H
Sbjct: 140 VKTPWLDGHH 149
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 156 bits (379), Expect = 2e-39
Identities = 81/160 (50%), Positives = 98/160 (61%), Gaps = 4/160 (2%)
Frame = +3
Query: 123 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPXFML 290
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI FML
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 291 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWL 470
QGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG +TNGSQFFITTV L
Sbjct: 66 QGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGPNTNGSQFFITTVPTPHL 125
Query: 471 DGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCG 590
DG+H IEN ++ +V ++CG
Sbjct: 126 DGKHVVFGKVIQGKSTVRTIENLETKNDDPVVPVVIEECG 165
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 153 bits (372), Expect = 2e-38
Identities = 74/130 (56%), Positives = 90/130 (69%), Gaps = 7/130 (5%)
Frame = +3
Query: 114 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 275
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
Query: 276 PXFMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITT 452
FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITT
Sbjct: 65 QGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITT 124
Query: 453 VKXSWLDGRH 482
V +LDG+H
Sbjct: 125 VPCDFLDGKH 134
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 130 bits (315), Expect = 1e-31
Identities = 66/111 (59%), Positives = 81/111 (72%), Gaps = 1/111 (0%)
Frame = +3
Query: 153 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGK 332
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP F++QGGD T G GG
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTLA--KEGY-YDGVIFHRVIPDFVIQGGDPTG-TGRGGT 65
Query: 333 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDGRH 482
SIYG+KF+DE + L HTG G+LSMANAG +TN SQFFIT WLDG+H
Sbjct: 66 SIYGDKFDDEIHSDLHHTGAGILSMANAGPNTNSSQFFITLAPTPWLDGKH 116
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 103 bits (247), Expect = 2e-23
Identities = 56/110 (50%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGKS 335
G I I+L + PK +NF E G+ Y +IFHR+I FM+QGGD +GTGG+S
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGGDPLG-DGTGGES 519
Query: 336 IYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDGRH 482
I+ FEDE + LKH P +SMAN+G +TNGSQFFITT WLDG+H
Sbjct: 520 IWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDLTPWLDGKH 569
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 92.3 bits (219), Expect = 6e-20
Identities = 52/110 (47%), Positives = 68/110 (61%), Gaps = 1/110 (0%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGKS 335
G+I IEL +D P NF L ++G+ Y+ +IFHR I FM+QGGD + G GG+S
Sbjct: 285 GEINIELHTDYAPHAVYNFVQLA--KQGY-YRNTIFHRNIARFMIQGGD-PSGTGRGGQS 340
Query: 336 IYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDGRH 482
I+G F+DE LKH G++SMAN G +TNGSQFFI LD +H
Sbjct: 341 IWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKH 390
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 77.8 bits (183), Expect = 1e-15
Identities = 46/99 (46%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGKS 335
G I IEL PK C NF LC +G+ Y G+I HRV+P F++QGGD T G GG+S
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLIQGGDPTG-TGMGGES 77
Query: 336 IYGNKFEDENF-TLKHTGPGVLSMANAGADTNGSQFFIT 449
IYG F E L+ G++ MA + N SQFFIT
Sbjct: 78 IYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFIT 116
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 45.2 bits (102), Expect = 8e-06
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Frame = +3
Query: 144 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGT 323
+ +G +VI+L PKTCENF LC K Y F+ + + Q GD G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTGDPLGPTGD 62
Query: 324 GGKSIY-----GNKFEDENF--TLKHTGPGVLSMANAGADTN-------GSQFFIT 449
GG+ ++ G +F F +L H G++SM+ A + GSQF IT
Sbjct: 63 GGRCVWNVLNKGTRFFKAEFNPSLVHNKMGLVSMSTATISSRDDKLLVCGSQFIIT 118
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 1.8
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +1
Query: 124 SSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 303
+STS ++P S + S P TS C + S+ S +S+PI+ T
Sbjct: 198 TSTSSTSIPIPPTSTSSTDTNSSPLPT-TSTSCTTS--TSIPTGGSSSLSTPITPTVPPT 254
Query: 304 SPTITALGESPSTAISLKTRISPLST 381
S + T++ P++ S T SPL T
Sbjct: 255 STSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 26.6 bits (56), Expect = 3.1
Identities = 25/86 (29%), Positives = 38/86 (44%)
Frame = +1
Query: 124 SSTSLLTMPHWEKLLLS*EVTSLPRRVKTSVPCALARKASVTRAPFSIVSSPISCCKEGT 303
+STS ++P S + S P TS C + T S+ S+PI+ T
Sbjct: 141 TSTSSTSIPIPPTSTSSTDTNSNPLPT-TSTSCTTSTSIPPTGGSSSL-STPITPTVPPT 198
Query: 304 SPTITALGESPSTAISLKTRISPLST 381
S + T++ P++ S T SPL T
Sbjct: 199 STSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 25.0 bits (52), Expect = 9.5
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 208 TSVPCALARKASVTRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISPLST 381
TS C + T S+ S+PI+ TS + T++ P++ S T +PL T
Sbjct: 111 TSTSCTTSTSIPPTGGSSSL-STPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 132 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 227
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +1
Query: 247 TRAPFSIVSSPISCCKEGTSPTITALGESPSTAISLKTRISP 372
+RA S++S I KE +P+ITA SP +A S + ISP
Sbjct: 321 SRAAASLLS--ILDSKEKNTPSITAKAGSPQSAPSKASYISP 360
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 3.1
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +2
Query: 428 WFPVLHHHC 454
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPAC2F3.09 |hem1||5-aminolevulinate synthase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 558
Score = 26.2 bits (55), Expect = 4.1
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -2
Query: 467 PGXLXSGDEELGTISISTGISHGEYARSSVLKGEI--LVFKLIAVDGLSPSAVMVGEVPS 294
PG L D GT++ S G G A SS L I L I L P VMVG + +
Sbjct: 362 PGLLSRVDIITGTLAKSYGCVGGYIAASSTLVDMIRSLAPGFIFTTSLPPH-VMVGALTA 420
Query: 293 LQH 285
++H
Sbjct: 421 VEH 423
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/64 (23%), Positives = 30/64 (46%)
Frame = -2
Query: 308 GEVPSLQHEXGDDTMENGALVTEAFLASAQGTEVFTRLGSDVTSQLNNNFSQWGIVNSDV 129
GEV ++QH +T+++ T S+ TE+ RL + + ++ N +
Sbjct: 878 GEVSAIQHSSAQNTLDDHVNTTTHESPSSAFTEILERLKA-IEQNISTNHTNDSAALKSS 936
Query: 128 EEYS 117
E++S
Sbjct: 937 EDHS 940
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +3
Query: 300 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 446
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
>SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1616
Score = 25.8 bits (54), Expect = 5.4
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 159 KIVIELRSDVTPKTC-ENFRA---LCTGEKGFGYKGSIFHRVIPXFMLQGGDF 305
++++ L SD+ PK C NF+A L FG + + F +I + G F
Sbjct: 1135 QLMLRLHSDIYPKICISNFKALRELSFSISEFGKENATFTLLIKLVFINWGRF 1187
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 9/54 (16%)
Frame = -3
Query: 253 PL*PKPFSPVH---RAR-----KFSHVL-GVTSLLSSITIFPSGASSTVTSKNT 119
P PKP +PV+ R + S+VL +TS SS+T PS + +T+ S T
Sbjct: 312 PSPPKPNNPVYLPPRGNPTVNDRVSNVLPSITSFDSSVTTVPSNSPATLNSYTT 365
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,621,065
Number of Sequences: 5004
Number of extensions: 55251
Number of successful extensions: 186
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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