Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_J02
(651 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 223 1e-58
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 222 2e-58
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 215 2e-56
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 212 2e-55
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 209 1e-54
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 202 1e-52
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 200 5e-52
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 196 1e-50
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 193 1e-49
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 188 4e-48
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 175 3e-44
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 175 3e-44
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 167 6e-42
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 165 2e-41
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 163 7e-41
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 130 6e-31
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 116 1e-26
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 114 4e-26
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 109 2e-24
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 106 1e-23
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 106 1e-23
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 95 3e-20
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 77 1e-14
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 48 4e-06
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 41 6e-04
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 35 0.054
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 31 0.50
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 31 0.50
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 31 0.50
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 28 4.7
At5g07270.1 68418.m00829 ankyrin repeat family protein contains ... 28 6.2
At3g09000.1 68416.m01053 proline-rich family protein 28 6.2
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 6.2
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 223 bits (544), Expect = 1e-58
Identities = 108/171 (63%), Positives = 121/171 (70%), Gaps = 7/171 (4%)
Frame = +3
Query: 108 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 266
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 267 RVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFI 446
RVIP FM QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA+TNGSQFFI
Sbjct: 63 RVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFI 122
Query: 447 TTVKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQIA 599
TVK WLDG+H IE G SGK K +V DCG+I+
Sbjct: 123 CTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 222 bits (542), Expect = 2e-58
Identities = 105/172 (61%), Positives = 123/172 (71%), Gaps = 7/172 (4%)
Frame = +3
Query: 105 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 263
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 264 HRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 443
HRVIP FM QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA+TNGSQFF
Sbjct: 61 HRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFF 120
Query: 444 ITTVKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQIA 599
I TVK WLDG+H IE G SGK K +V DCGQ++
Sbjct: 121 ICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 215 bits (525), Expect = 2e-56
Identities = 103/169 (60%), Positives = 120/169 (71%), Gaps = 7/169 (4%)
Frame = +3
Query: 114 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 272
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 273 IPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITT 452
IP FM QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA+TNGSQFFI T
Sbjct: 65 IPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICT 124
Query: 453 VKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQIA 599
K SWLDG+H IE G SG+T K +V DCGQI+
Sbjct: 125 EKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 212 bits (517), Expect = 2e-55
Identities = 102/172 (59%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Frame = +3
Query: 105 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 263
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 264 HRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 443
HRVIP FM QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G +TNGSQFF
Sbjct: 61 HRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFF 120
Query: 444 ITTVKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQIA 599
I T K SWLDG+H IE G SGKT K + DCGQ++
Sbjct: 121 ICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 209 bits (510), Expect = 1e-54
Identities = 96/171 (56%), Positives = 119/171 (69%), Gaps = 7/171 (4%)
Frame = +3
Query: 105 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 263
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 264 HRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFF 443
HR+IP FM QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G +TNGSQFF
Sbjct: 61 HRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGPNTNGSQFF 120
Query: 444 ITTVKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQI 596
I T K SWLDG+H +E+ G G +R+V +DCG++
Sbjct: 121 ICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNPSERVVIEDCGEL 171
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 202 bits (494), Expect = 1e-52
Identities = 98/167 (58%), Positives = 113/167 (67%), Gaps = 7/167 (4%)
Frame = +3
Query: 117 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 275
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 276 PXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 455
P FM+QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G DTNGSQFFITTV
Sbjct: 93 PSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGEDTNGSQFFITTV 152
Query: 456 KXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQI 596
SWLDGRH IE G+QSG ++V D G++
Sbjct: 153 TTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTPKSKVVIADSGEL 199
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 200 bits (489), Expect = 5e-52
Identities = 98/167 (58%), Positives = 111/167 (66%), Gaps = 7/167 (4%)
Frame = +3
Query: 117 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 275
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 276 PXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 455
P FMLQGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG DTNGSQFFITTV
Sbjct: 96 PSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQDTNGSQFFITTV 155
Query: 456 KXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQI 596
SWLDGRH +E G QSG ++V D G++
Sbjct: 156 TTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTPKSKVVIVDSGEL 202
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 196 bits (478), Expect = 1e-50
Identities = 97/165 (58%), Positives = 113/165 (68%), Gaps = 5/165 (3%)
Frame = +3
Query: 117 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXF 284
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI F
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDF 149
Query: 285 MLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKXS 464
M+QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+K S
Sbjct: 150 MIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTS 209
Query: 465 WLDGRHXXXXXXXXXXXXXXXIENFGRQSG-KTXKRIVXKDCGQI 596
WLDGRH IE G + K++V DCGQ+
Sbjct: 210 WLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKVVIADCGQL 254
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 193 bits (470), Expect = 1e-49
Identities = 87/122 (71%), Positives = 99/122 (81%)
Frame = +3
Query: 117 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQG 296
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I FM+QG
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 297 GDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDG 476
GDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TNGSQFFI TVK SWLD
Sbjct: 156 GDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDN 215
Query: 477 RH 482
+H
Sbjct: 216 KH 217
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 188 bits (457), Expect = 4e-48
Identities = 88/168 (52%), Positives = 113/168 (67%), Gaps = 7/168 (4%)
Frame = +3
Query: 117 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 275
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 276 PXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 455
P FM+QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G D+NGSQFFITTV
Sbjct: 120 PGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGPDSNGSQFFITTV 179
Query: 456 KXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQIA 599
SWLDG H IE G+ SG ++ G+++
Sbjct: 180 TTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVPKANVIIFASGEVS 227
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 175 bits (425), Expect = 3e-44
Identities = 90/172 (52%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Frame = +3
Query: 102 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 257
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 258 IFHRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 437
FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQ
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQ 122
Query: 438 FFITTVKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQ 593
FFI + LDG+H +E G GK + DCG+
Sbjct: 123 FFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 175 bits (425), Expect = 3e-44
Identities = 90/172 (52%), Positives = 104/172 (60%), Gaps = 8/172 (4%)
Frame = +3
Query: 102 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 257
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 258 IFHRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 437
FHRVI FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G +TNGSQ
Sbjct: 63 SFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGPNTNGSQ 122
Query: 438 FFITTVKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQ 593
FFI + LDG+H +E G GK + DCG+
Sbjct: 123 FFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKPTSPVKIIDCGE 174
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 167 bits (406), Expect = 6e-42
Identities = 86/173 (49%), Positives = 108/173 (62%), Gaps = 9/173 (5%)
Frame = +3
Query: 105 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 260
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 261 FHRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQF 440
FHRVI FM+QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G +TNGSQF
Sbjct: 61 FHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGPNTNGSQF 120
Query: 441 FITTVKXSWLDGRHXXXXXXXXXXXXXXXIENFG-RQSGKTXKRIVXKDCGQI 596
FITT + S LDG+H IE+ + + +V DCG+I
Sbjct: 121 FITTTRTSHLDGKHVVFGRVTKGMGVVRSIEHVSIEEQSCPSQDVVIHDCGEI 173
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 165 bits (402), Expect = 2e-41
Identities = 77/128 (60%), Positives = 92/128 (71%), Gaps = 5/128 (3%)
Frame = +3
Query: 114 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 278
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 279 XFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 458
FM+Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 92 DFMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAK 151
Query: 459 XSWLDGRH 482
WLD +H
Sbjct: 152 CDWLDNKH 159
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 163 bits (397), Expect = 7e-41
Identities = 84/168 (50%), Positives = 103/168 (61%), Gaps = 8/168 (4%)
Frame = +3
Query: 117 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 275
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
Query: 276 PXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTV 455
F++QGGD + +G SIYG F DENF ++H+ G+++MAN G D+NGSQFFITTV
Sbjct: 108 SGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGPDSNGSQFFITTV 167
Query: 456 KXSWLDGRHXXXXXXXXXXXXXXXIE-NFGRQSGKTXKRIVXKDCGQI 596
K SWL+G H IE G SGK K++V D G+I
Sbjct: 168 KASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKKVVIADSGEI 215
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 130 bits (315), Expect = 6e-31
Identities = 73/172 (42%), Positives = 89/172 (51%), Gaps = 8/172 (4%)
Frame = +3
Query: 102 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 257
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 258 IFHRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQ 437
FHR++ Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A D GS
Sbjct: 63 FFHRIMKGSSAQAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSH 122
Query: 438 FFITTVKXSWLDGRHXXXXXXXXXXXXXXXIENFGRQSGKTXKRIVXKDCGQ 593
F IT LD + IE G + GK + CG+
Sbjct: 123 FHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDEEGKPTVSVKIIRCGE 174
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 116 bits (279), Expect = 1e-26
Identities = 60/119 (50%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Frame = +3
Query: 129 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFT 308
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ F++QGGD T
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIVQGGDPT 66
Query: 309 NHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDGRH 482
G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT LDG+H
Sbjct: 67 G-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKH 124
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 114 bits (275), Expect = 4e-26
Identities = 71/179 (39%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Frame = +3
Query: 105 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 263
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 264 HRVIPXFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKH-TGPGVLSMANAGADTNGSQF 440
++P M GGD N + I+ + +DE F L H GPG++SM AD+NGSQF
Sbjct: 61 DHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISM----ADSNGSQF 112
Query: 441 FITTVKXS-WLDGRHXXXXXXXXXXXXXXXIEN--FGRQSGKTXKRIVXKDCGQIA*FK 608
I +DG H IE + K +V DCG+++ ++
Sbjct: 113 QIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIEKEVITTTTRTPSKPVVIADCGELSDYR 171
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 109 bits (262), Expect = 2e-24
Identities = 59/111 (53%), Positives = 74/111 (66%), Gaps = 1/111 (0%)
Frame = +3
Query: 153 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGK 332
LG I ++L + PKT ENF C G+ Y +FHRVI FM+Q GD +GTGG+
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVIRGFMIQTGDPLG-DGTGGQ 539
Query: 333 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDGRH 482
SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV WLD +H
Sbjct: 540 SIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKH 590
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 106 bits (255), Expect = 1e-23
Identities = 56/110 (50%), Positives = 72/110 (65%), Gaps = 1/110 (0%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGKS 335
G + IEL D+ P+ CENF LC E+G+ Y G FHR I FM+QGGD T G GG+S
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQGGDPTG-TGKGGES 408
Query: 336 IYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDGRH 482
I+G F+DE N L H+G GV+SMAN+G TNGSQFF+ + L+ +H
Sbjct: 409 IWGKPFKDEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKH 458
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 106 bits (254), Expect = 1e-23
Identities = 59/109 (54%), Positives = 70/109 (64%), Gaps = 1/109 (0%)
Frame = +3
Query: 153 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGK 332
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I FM+QGGD G GG
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCAS--GY-YDGTIFHRNIKGFMIQGGD-PKGTGKGGT 64
Query: 333 SIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVKXSWLDG 476
SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K L+G
Sbjct: 65 SIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNG 113
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 95.5 bits (227), Expect = 3e-20
Identities = 53/111 (47%), Positives = 72/111 (64%), Gaps = 2/111 (1%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGKS 335
G I +EL PK+ NF LC +G+ + +IFHRVIP F++QGGD T +GTGG S
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLVQGGDPTG-SGTGGDS 77
Query: 336 IYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFITTVKXSWLDGRH 482
IYG F DE + L+ + G+++MANA + ++NGSQFF T K WLD +H
Sbjct: 78 IYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKH 128
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 76.6 bits (180), Expect = 1e-14
Identities = 51/119 (42%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Frame = +3
Query: 153 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGTGGK 332
LG IVI+L SD P TC+NF LC K Y G +FH V F Q GD T G GG
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGD 64
Query: 333 SI----YGNK---FEDE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKXSWLDGRH 482
SI YG + ++DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H
Sbjct: 65 SIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKH 123
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 117 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQG 296
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P ++ G
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMPGYVQHG 152
Query: 297 G 299
G
Sbjct: 153 G 153
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 41.1 bits (92), Expect = 6e-04
Identities = 27/105 (25%), Positives = 47/105 (44%)
Frame = +3
Query: 144 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGGDFTNHNGT 323
D G + IEL D P + F C + G+ +KG +F RV+ F++Q GD +
Sbjct: 83 DTGKGSVTIELFKDTAPNVVDQFMKFC--QDGY-FKGFLFSRVVKHFVIQAGDSAEFDAV 139
Query: 324 GGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 458
++ + +LKH ++ A + G +FFI + +
Sbjct: 140 KDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQGGFEFFIVSAQ 180
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 34.7 bits (76), Expect = 0.054
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 141 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 278
D PLG++V+ L P T F+ +CT YK + H++ P
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFP 125
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGG 299
G I +EL + +P+ + F LC + +KG F RVI +++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGG 299
G I +EL + +P+ + F LC + +KG F RVI +++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 31.5 bits (68), Expect = 0.50
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 156 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPXFMLQGG 299
G I +EL + +P+ + F LC + +KG F RVI +++Q G
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAG 134
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = +1
Query: 208 TSVPCALARKASVTRAPFS--IVSSPISCCKEGTSPTITALGESPSTAISLKTRISP 372
TS P +A K+S T P S + S P S + +SP + SPS A T SP
Sbjct: 235 TSPPAPMAPKSSSTIPPSSAPMTSPPGSMAPKSSSPVSNSPTVSPSLAPGGSTSSSP 291
>At5g07270.1 68418.m00829 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 513
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 244 VTRAPFSIVSSPISCCKEGTSPTITALG 327
VT +PF V+ P+ C EGT P G
Sbjct: 429 VTCSPFPSVNIPMCTCNEGTCPNFETHG 456
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 27.9 bits (59), Expect = 6.2
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +1
Query: 187 SLPRRVKTSVPCALARKASVTRAPF-----SIVSSPISCCKEGTSPTITALGESPSTAIS 351
S PR S ++R A+ TR P SIVSS SPT+ +L ++PS
Sbjct: 225 SNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAPSRG-- 282
Query: 352 LKTRISPLSTLDLAYSPWLMP 414
SP TL+ + PW P
Sbjct: 283 ----TSPSPTLN-SSRPWKPP 298
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1
Query: 88 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 213
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,085,902
Number of Sequences: 28952
Number of extensions: 313716
Number of successful extensions: 894
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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