Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I24
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 249 1e-66
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 248 3e-66
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 247 6e-66
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 247 6e-66
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 245 2e-65
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 244 4e-65
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 244 4e-65
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 244 4e-65
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 243 7e-65
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 120 8e-28
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 120 8e-28
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 120 8e-28
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 120 8e-28
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 120 8e-28
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 120 8e-28
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 116 2e-26
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 91 4e-19
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 91 6e-19
At2g31580.1 68415.m03858 expressed protein contains Pfam profi... 31 0.51
At4g37190.1 68417.m05265 expressed protein 31 0.88
At4g22070.1 68417.m03192 WRKY family transcription factor identi... 30 1.5
At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding ... 30 1.5
At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putati... 27 8.2
At1g62300.1 68414.m07028 WRKY family transcription factor simila... 27 8.2
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 8.2
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 249 bits (610), Expect = 1e-66
Identities = 116/150 (77%), Positives = 125/150 (83%)
Frame = +3
Query: 204 GDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGA 383
GD+DLQLERINVY+NEASGGKYVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQSGA
Sbjct: 38 GDTDLQLERINVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGA 97
Query: 384 GNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXX 563
GNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQ FQ KI
Sbjct: 98 GNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIRE 157
Query: 564 XYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 158 EYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Score = 68.1 bits (159), Expect = 5e-12
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIGAKFWE+I EHGID TG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTG 34
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 248 bits (606), Expect = 3e-66
Identities = 116/153 (75%), Positives = 127/153 (83%), Gaps = 1/153 (0%)
Frame = +3
Query: 198 YHGDS-DLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 374
Y+GDS DLQLERINVYYNEASGG+YVPRA+L+DLEPGTMDS+RSGP+GQIFRPDNFVFGQ
Sbjct: 36 YNGDSADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQ 95
Query: 375 SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXK 554
SGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQ FQ K
Sbjct: 96 SGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISK 155
Query: 555 IXXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
I YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 IREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 188
Score = 72.1 bits (169), Expect = 3e-13
Identities = 27/34 (79%), Positives = 32/34 (94%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+H+Q GQCGNQIG+KFWE+I DEHG+DPTG
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTG 34
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 247 bits (604), Expect = 6e-66
Identities = 115/152 (75%), Positives = 125/152 (82%)
Frame = +3
Query: 198 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS 377
Y GDS+LQLER+NVYYNEAS G+YVPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQS
Sbjct: 36 YVGDSELQLERVNVYYNEASCGRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQS 95
Query: 378 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKI 557
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQ FQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Query: 558 XXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Score = 66.1 bits (154), Expect = 2e-11
Identities = 26/34 (76%), Positives = 31/34 (91%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIG+KFWE+++ EHGID TG
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTG 34
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 247 bits (604), Expect = 6e-66
Identities = 116/153 (75%), Positives = 126/153 (82%), Gaps = 1/153 (0%)
Frame = +3
Query: 198 YHGDS-DLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ 374
Y GD+ DLQLERINVYYNEASGG+YVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQ
Sbjct: 36 YSGDTADLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQ 95
Query: 375 SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXK 554
SGAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQ FQ K
Sbjct: 96 SGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISK 155
Query: 555 IXXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
I YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 IREEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 188
Score = 69.7 bits (163), Expect = 2e-12
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIG+KFWE+I DEHGID TG
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTG 34
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 245 bits (599), Expect = 2e-65
Identities = 113/152 (74%), Positives = 125/152 (82%)
Frame = +3
Query: 198 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS 377
Y G++DLQLER+NVYYNEAS G++VPRA+L+DLEPGTMDSVRSGP+GQIFRPDNFVFGQS
Sbjct: 36 YQGENDLQLERVNVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQS 95
Query: 378 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKI 557
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQ FQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Query: 558 XXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 67.3 bits (157), Expect = 8e-12
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIGAKFWE++ EHGID TG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTG 34
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 244 bits (597), Expect = 4e-65
Identities = 114/152 (75%), Positives = 124/152 (81%)
Frame = +3
Query: 198 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS 377
Y GDSDLQLERINVYYNEAS G++VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQS
Sbjct: 36 YTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQS 95
Query: 378 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKI 557
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQ FQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Query: 558 XXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 70.5 bits (165), Expect = 9e-13
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTG 34
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 244 bits (597), Expect = 4e-65
Identities = 114/152 (75%), Positives = 124/152 (81%)
Frame = +3
Query: 198 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS 377
Y GDSDLQLERINVYYNEAS G++VPRA+L+DLEPGTMDS+RSGP+GQ FRPDNFVFGQS
Sbjct: 36 YTGDSDLQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQS 95
Query: 378 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKI 557
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQ FQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Query: 558 XXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 70.5 bits (165), Expect = 9e-13
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIGAKFWE++ EHGIDPTG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTG 34
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 244 bits (597), Expect = 4e-65
Identities = 114/152 (75%), Positives = 125/152 (82%)
Frame = +3
Query: 198 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS 377
Y G+SDLQLER+NVYYNEAS G+YVPRAIL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQS
Sbjct: 36 YVGNSDLQLERVNVYYNEASCGRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQS 95
Query: 378 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKI 557
GAGNNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQ FQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Query: 558 XXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 REEYPDRMMLTFSVFPSPKVSDTVVEPYNATL 187
Score = 72.5 bits (170), Expect = 2e-13
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIG+KFWE++ DEHGIDPTG
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG 34
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 243 bits (595), Expect = 7e-65
Identities = 115/152 (75%), Positives = 124/152 (81%)
Frame = +3
Query: 198 YHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS 377
Y GDS LQLERI+VY+NEASGGKYVPRA+L+DLEPGTMDS+RSGPFGQIFRPDNFVFGQS
Sbjct: 36 YVGDSPLQLERIDVYFNEASGGKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQS 95
Query: 378 GAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKI 557
GAGNNWAKGHYTEGAEL+DSVLDVVRKEAE+ DCLQ FQ KI
Sbjct: 96 GAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGFQVCHSLGGGTGSGMGTLLISKI 155
Query: 558 XXXYPDRIMNTYSVVPSPKVSDTVVEPYNATL 653
YPDR+M T+SV PSPKVSDTVVEPYNATL
Sbjct: 156 REEYPDRMMMTFSVFPSPKVSDTVVEPYNATL 187
Score = 70.5 bits (165), Expect = 9e-13
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG 193
MREI+HIQ GQCGNQIGAKFWE+I DEHGID TG
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTG 34
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 120 bits (289), Expect = 8e-28
Identities = 56/143 (39%), Positives = 82/143 (57%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 404
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 405 HYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDRIM 584
HYT G E+VD LD VRK A++C LQ F ++ Y +
Sbjct: 107 HYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 585 NTYSVVPSPKVSDTVVEPYNATL 653
+++ PSP+VS VVEPYN+ L
Sbjct: 167 LGFTIYPSPQVSTAVVEPYNSVL 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 202
MREI+ I GQ G Q+G WE+ EHGI P G +P
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMP 37
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 120 bits (289), Expect = 8e-28
Identities = 56/143 (39%), Positives = 82/143 (57%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 404
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 405 HYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDRIM 584
HYT G E+VD LD VRK A++C LQ F ++ Y +
Sbjct: 107 HYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 585 NTYSVVPSPKVSDTVVEPYNATL 653
+++ PSP+VS VVEPYN+ L
Sbjct: 167 LGFTIYPSPQVSTAVVEPYNSVL 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 202
MREI+ I GQ G Q+G WE+ EHGI P G +P
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMP 37
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 120 bits (289), Expect = 8e-28
Identities = 56/143 (39%), Positives = 83/143 (58%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 404
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 405 HYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDRIM 584
HYT G E+VD LD +RK A++C LQ F ++ Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 585 NTYSVVPSPKVSDTVVEPYNATL 653
++V PSP+VS +VVEPYN+ L
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVL 189
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 202
MRE + I GQ G Q+G WE+ EHGI P G +P
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP 37
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 120 bits (289), Expect = 8e-28
Identities = 56/143 (39%), Positives = 83/143 (58%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 404
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 405 HYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDRIM 584
HYT G E+VD LD +RK A++C LQ F ++ Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 585 NTYSVVPSPKVSDTVVEPYNATL 653
++V PSP+VS +VVEPYN+ L
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVL 189
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 202
MRE + I GQ G Q+G WE+ EHGI P G +P
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP 37
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 120 bits (289), Expect = 8e-28
Identities = 56/143 (39%), Positives = 83/143 (58%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 404
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 405 HYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDRIM 584
HYT G E+VD LD +RK A++C LQ F ++ Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 585 NTYSVVPSPKVSDTVVEPYNATL 653
++V PSP+VS +VVEPYN+ L
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVL 189
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 202
MRE + I GQ G Q+G WE+ EHGI P G +P
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP 37
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 120 bits (289), Expect = 8e-28
Identities = 56/143 (39%), Positives = 83/143 (58%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 404
+ N +++E GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 405 HYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDRIM 584
HYT G E+VD LD +RK A++C LQ F ++ Y +
Sbjct: 107 HYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSK 166
Query: 585 NTYSVVPSPKVSDTVVEPYNATL 653
++V PSP+VS +VVEPYN+ L
Sbjct: 167 LGFTVYPSPQVSTSVVEPYNSVL 189
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/37 (48%), Positives = 22/37 (59%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 202
MRE + I GQ G Q+G WE+ EHGI P G +P
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP 37
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 116 bits (278), Expect = 2e-26
Identities = 52/143 (36%), Positives = 84/143 (58%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKG 404
+ N +++E S G++VPRA+ +DLEP +D VR+G + Q+F P+ + G+ A NN+A+G
Sbjct: 47 DAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARG 106
Query: 405 HYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDRIM 584
HYT G E+VD+ L+ +RK A++C LQ F ++ + +
Sbjct: 107 HYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSK 166
Query: 585 NTYSVVPSPKVSDTVVEPYNATL 653
+++ PSP+VS VVEPYN+ L
Sbjct: 167 LGFTIYPSPQVSTAVVEPYNSVL 189
Score = 45.6 bits (103), Expect = 3e-05
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCLP 202
MREI+ I GQ G Q+G WE+ EHGI P G +P
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMP 37
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 91.5 bits (217), Expect = 4e-19
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWA 398
+R +V++ +A Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 46 DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWA 105
Query: 399 KGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDR 578
G Y +G + + ++D++ +EA+ D L+ F + Y +
Sbjct: 106 SG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKK 164
Query: 579 IMNTYSVVPSP-KVSDTVVEPYNATL 653
++ TYSV P+ + SD VV+PYN+ L
Sbjct: 165 LVQTYSVFPNQMETSDVVVQPYNSLL 190
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 95 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCL 199
REI+ +Q GQCGNQIG +FW+ + EHGI G L
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGIL 37
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 91.1 bits (216), Expect = 6e-19
Identities = 44/146 (30%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Frame = +3
Query: 225 ERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWA 398
+R +V++ +A Y+PRA+L+DLEP ++ +++G + ++ +N GAGNNWA
Sbjct: 46 DRKDVFFYQADDQHYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWA 105
Query: 399 KGHYTEGAELVDSVLDVVRKEAESCDCLQXFQXXXXXXXXXXXXXXXXXXXKIXXXYPDR 578
G Y +G + + ++D++ +EA+ D L+ F + Y +
Sbjct: 106 SG-YHQGKGVEEEIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKK 164
Query: 579 IMNTYSVVPSP-KVSDTVVEPYNATL 653
++ TYSV P+ + SD VV+PYN+ L
Sbjct: 165 LVQTYSVFPNQMETSDVVVQPYNSLL 190
Score = 48.8 bits (111), Expect = 3e-06
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2
Query: 95 REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGCL 199
REI+ +Q GQCGNQIG +FW+ + EHGI G L
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGIL 37
>At2g31580.1 68415.m03858 expressed protein contains Pfam profile:
PF04446 family of unknown function (DUF549)
Length = 567
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/22 (63%), Positives = 19/22 (86%)
Frame = +3
Query: 426 LVDSVLDVVRKEAESCDCLQXF 491
+++SV VVRKEAE+C+CLQ F
Sbjct: 1 MINSV-GVVRKEAENCNCLQVF 21
>At4g37190.1 68417.m05265 expressed protein
Length = 562
Score = 30.7 bits (66), Expect = 0.88
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 92 MREIVHIQAGQCGNQIGAKFWEIISDEHGI 181
MREIV IQ G+ N +G+ FW + G+
Sbjct: 1 MREIVTIQVGEFANFVGSHFWNFQDELLGL 30
>At4g22070.1 68417.m03192 WRKY family transcription factor identical
to WRKY transcription factor 31 (WRKY31) GI:15990589
from [Arabidopsis thaliana]
Length = 538
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Frame = -3
Query: 543 GGCPYRN---RCRRRASVSVGIXGGNHTIPLP 457
GGCP R RC S+ + GNH PLP
Sbjct: 326 GGCPVRKQVQRCAEDRSILITTYEGNHNHPLP 357
>At1g33360.1 68414.m04129 ATP-dependent Clp protease ATP-binding
subunit ClpX, putative similar to CLP protease
regulatory subunit CLPX GI:2674203 from [Arabidopsis
thaliana]
Length = 656
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = -3
Query: 543 GGCPYRNRCRRRASVSVGIXGGNHTIPLPFERRLKLNRRAQHPPCS 406
G CP R R S G GG P+P RR KL P CS
Sbjct: 32 GSCPRRRIQERFKSEQGGGGGGGDDFPVPVTRR-KLRAEPNCPRCS 76
>At3g10900.1 68416.m01312 (1-4)-beta-mannan endohydrolase, putative
similar to (1-4)-beta-mannan endohydrolase [Coffea
arabica] GI:10178872, (1-4)-beta-mannan endohydrolase
GB:AAB87859 [Lycopersicon esculentum]; contains Pfam
profile PF00150: Cellulase (glycosyl hydrolase family 5)
Length = 408
Score = 27.5 bits (58), Expect = 8.2
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 98 EIVHIQAGQCGNQIGAKFWEIISD 169
+I++ A + G+ GA FWE+IS+
Sbjct: 346 DIIYASAQKGGSAAGALFWEVISE 369
>At1g62300.1 68414.m07028 WRKY family transcription factor similar
to putative DNA-binding protein GI:7268215 from
[Arabidopsis thaliana]
Length = 553
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = -3
Query: 540 GCPYRN---RCRRRASVSVGIXGGNHTIPLP 457
GCP R RC S+ + GNH PLP
Sbjct: 342 GCPVRKQVQRCAEDRSILITTYEGNHNHPLP 372
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 8.2
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = -2
Query: 490 NXWRQSHDSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPKGPERTES 311
N R DSA+ ++S ++ S+ S + PAP P L ICP G +
Sbjct: 98 NNLRPRSDSATTSSSSHSQPLLSSSSS----SATSPAPTSPANVLPTGNICPSGKIQITG 153
Query: 310 MVPG-SKSTRMARGT 269
M S+S + GT
Sbjct: 154 MTQSRSRSDVLGSGT 168
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,453,737
Number of Sequences: 28952
Number of extensions: 229828
Number of successful extensions: 648
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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