Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I23
(536 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416... 206 9e-54
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835... 194 4e-50
10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406... 192 2e-49
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215... 190 6e-49
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 27 7.2
08_01_0455 + 4012857-4013735 27 9.5
05_01_0429 + 3399266-3399708,3401320-3401382,3403919-3404345,340... 27 9.5
04_04_0551 + 26191629-26192174 27 9.5
01_06_0319 - 28441082-28441102,28441630-28441701,28442568-284426... 27 9.5
>05_07_0347 -
29440541-29440664,29440908-29441020,29441522-29441689,
29442341-29442391,29442518-29442555,29442885-29442978
Length = 195
Score = 206 bits (503), Expect = 9e-54
Identities = 92/151 (60%), Positives = 113/151 (74%)
Frame = +2
Query: 71 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSXELLQQHYSDLASRPF 250
A + ERTFI +KPDGVQRGL+ I+ RFE+KGFKLV +K V PS E Q+HY DL RPF
Sbjct: 42 AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101
Query: 251 FPGLXKYMSSGPVVPMVWEGLNVVXTGRQMLGATNPXDSXPGTIRGDLCIQVGRNIIHGS 430
F GL ++SSGPV+ MVWEG V+ GR+++GAT+P S PGTIRGDL + VGRNIIHGS
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIKYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGS 161
Query: 431 DSVESAKKEIGLWFTDKEVVGWTPANENWVY 523
D E+AK EIGLWF +E+V +T E W+Y
Sbjct: 162 DGPETAKAEIGLWFEPRELVSYTSNEEKWIY 192
>07_03_0445 -
18281715-18281832,18282274-18282505,18283486-18283534,
18283733-18283783
Length = 149
Score = 194 bits (473), Expect = 4e-50
Identities = 86/147 (58%), Positives = 111/147 (75%)
Frame = +2
Query: 83 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSXELLQQHYSDLASRPFFPGL 262
E++FIM+KPDGVQRGL+G II RFEKKGF L G+KF+ QQHY+DL+ +PFFPGL
Sbjct: 2 EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61
Query: 263 XKYMSSGPVVPMVWEGLNVVXTGRQMLGATNPXDSXPGTIRGDLCIQVGRNIIHGSDSVE 442
+Y+ SGPVV MVWEG +VV TGR+++GAT P ++ PGTIR D ++VGRN+IHGSDSV+
Sbjct: 62 VEYIISGPVVAMVWEGKDVVATGRRIIGATRPWEAAPGTIRADYAVEVGRNVIHGSDSVD 121
Query: 443 SAKKEIGLWFTDKEVVGWTPANENWVY 523
+ KKEI LWF + + W W+Y
Sbjct: 122 NGKKEIALWFPE-GLAEWRSNLHPWIY 147
>10_08_0945 -
21738643-21738760,21740056-21740287,21740582-21740630,
21740720-21740776
Length = 151
Score = 192 bits (467), Expect = 2e-49
Identities = 84/147 (57%), Positives = 109/147 (74%)
Frame = +2
Query: 83 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSXELLQQHYSDLASRPFFPGL 262
E+TFIM+KPDGVQRGL+G +I RFEKKGF L +K + ++HY+DL+S+PFF GL
Sbjct: 4 EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63
Query: 263 XKYMSSGPVVPMVWEGLNVVXTGRQMLGATNPXDSXPGTIRGDLCIQVGRNIIHGSDSVE 442
+Y+ SGPVV MVWEG VV TGR+++GATNP + PGTIRGD + +GRN+IHGSDSVE
Sbjct: 64 VEYIVSGPVVAMVWEGKQVVSTGRKLVGATNPLAAEPGTIRGDFAVDIGRNVIHGSDSVE 123
Query: 443 SAKKEIGLWFTDKEVVGWTPANENWVY 523
+A+KEI LWF + + W W+Y
Sbjct: 124 NARKEIALWFPE-GIAEWRSNQHPWIY 149
>12_02_0695 +
22220054-22220056,22221226-22221276,22221415-22221501,
22222064-22222144,22222241-22222353,22222482-22222531,
22222790-22222857
Length = 150
Score = 190 bits (463), Expect = 6e-49
Identities = 83/146 (56%), Positives = 107/146 (73%)
Frame = +2
Query: 83 ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSXELLQQHYSDLASRPFFPGL 262
E+++IM+KPDGVQRGLVG II RFEKKGF L GLK +L Q+HY DL +PFFPGL
Sbjct: 3 EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62
Query: 263 XKYMSSGPVVPMVWEGLNVVXTGRQMLGATNPXDSXPGTIRGDLCIQVGRNIIHGSDSVE 442
+Y++SGPVV M WEG VV + R+++GATNP + PGTIRGDL +Q GRN++HGSDS +
Sbjct: 63 IEYITSGPVVCMAWEGNGVVASARKLIGATNPLQAEPGTIRGDLAVQTGRNVVHGSDSPD 122
Query: 443 SAKKEIGLWFTDKEVVGWTPANENWV 520
+ K+EI LWF + E+ W W+
Sbjct: 123 NGKREIALWFKEGELCEWESVLTPWL 148
>01_03_0131 -
12858377-12858664,12859585-12859975,12863357-12863397,
12864745-12865419
Length = 464
Score = 27.5 bits (58), Expect = 7.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 157 FETFNNGAHKTTLYTIRLNHNKSTL 83
+ F +K T+YT+RL+HN+ L
Sbjct: 421 YRAFTWAEYKRTMYTLRLSHNRLDL 445
>08_01_0455 + 4012857-4013735
Length = 292
Score = 27.1 bits (57), Expect = 9.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 155 RNVQ*WCPQDHVVHHQA 105
R V WCPQD V+ H+A
Sbjct: 166 RCVATWCPQDRVLRHRA 182
>05_01_0429 +
3399266-3399708,3401320-3401382,3403919-3404345,
3404863-3405141
Length = 403
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 157 FETFNNGAHKTTLYTIRLNHNKSTLTLFR 71
+ +F +KTT+Y++RL+H S L LF+
Sbjct: 363 YRSFTWAEYKTTMYSLRLSH--SRLELFK 389
>04_04_0551 + 26191629-26192174
Length = 181
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 233 LASRPFFPGLXKYMSSGPVVPMVWEGL--NVVXTGRQMLGATNPXDSXPGTIRGDL 394
+ +RP Y++ + P+++EG N + TGRQ+ + ++ PG G L
Sbjct: 83 IRTRPTVHTSVVYVACAELKPVLFEGFFGNDIATGRQLTTTSTDVENFPGFPNGIL 138
>01_06_0319 -
28441082-28441102,28441630-28441701,28442568-28442627,
28442918-28443105,28444300-28444327,28444880-28444907,
28444942-28445163,28445238-28445409,28446224-28447468,
28447573-28447741,28447820-28448045,28449096-28449451,
28449530-28449724,28450655-28450864,28451729-28452004
Length = 1155
Score = 27.1 bits (57), Expect = 9.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = -3
Query: 333 RPVFTTLRPSHTIGTTGPELMYFXRPGKKGRDAKSL*CCWRS--SXDGHTNFKPTSLKP 163
RP S+T + P+ RPGK+G DA+S+ S S T +P S KP
Sbjct: 529 RPFCPCASRSNTDASLHPQTENGSRPGKRGNDAESVPGTNGSDLSQTDDTEARPCSKKP 587
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,858,351
Number of Sequences: 37544
Number of extensions: 258083
Number of successful extensions: 654
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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