Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I23
         (536 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...   196   6e-51
AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical ...    64   6e-11
AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical...    41   5e-04

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score =  196 bits (479), Expect = 6e-51
 Identities = 92/148 (62%), Positives = 110/148 (74%), Gaps = 1/148 (0%)
 Frame = +2

Query: 83  ERTFIMVKPDGVQRGLVGTIIERFEKKGFKLVGLKFVWPSXELLQQHYSDLASRPFFPGL 262
           ERTFI +KPDGV RGLVG II RFE++G+KLV LK +  S   L+ HY DL  +PFFP L
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFPSL 64

Query: 263 XKYMSSGPVVPMVWEGLNVVXTGRQMLGATNPXDSXPGTIRGDLCIQVGRNIIHGSDSVE 442
            +YMSSGPVV MVW+GL+VV  GR MLGATNP  S PGTIRGD CIQ GRNI HGSD+V+
Sbjct: 65  IEYMSSGPVVAMVWQGLDVVKQGRSMLGATNPLASAPGTIRGDFCIQTGRNICHGSDAVD 124

Query: 443 SAKKEIGLWFTDKEVVGW-TPANENWVY 523
           SA +EI  WF  +E+  + +P   +WVY
Sbjct: 125 SANREIAHWFKQEEINDYASPFINSWVY 152


>AC006644-2|AAF39837.1|  118|Caenorhabditis elegans Hypothetical
           protein F55A3.6 protein.
          Length = 118

 Score = 64.1 bits (149), Expect = 6e-11
 Identities = 36/79 (45%), Positives = 45/79 (56%)
 Frame = +2

Query: 242 RPFFPGLXKYMSSGPVVPMVWEGLNVVXTGRQMLGATNPXDSXPGTIRGDLCIQVGRNII 421
           +PFFP L  YMSSGPVV M+WEG +VV   R +LG          +I  DL ++      
Sbjct: 33  KPFFPLLIDYMSSGPVVAMLWEGCDVVKRARVILGEELEVGEF-RSIFYDLVVRDTHKGC 91

Query: 422 HGSDSVESAKKEIGLWFTD 478
           H SDSV SA +E  LWF +
Sbjct: 92  HCSDSVASANREYVLWFEE 110


>AC025721-13|AAR85897.1|  139|Caenorhabditis elegans Hypothetical
           protein Y48G8AL.15 protein.
          Length = 139

 Score = 41.1 bits (92), Expect = 5e-04
 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 1/126 (0%)
 Frame = +2

Query: 95  IMVKPDGV-QRGLVGTIIERFEKKGFKLVGLKFVWPSXELLQQHYSDLASRPFFPGLXKY 271
           +++KP+ V  R L    +      G ++  ++ +  S  L +Q Y+    + F+  L ++
Sbjct: 14  VVLKPEIVAHRVLAQVALSELRSNGIEIEEMRQMKISGSLAKQLYAQHQGKFFYDRLVRH 73

Query: 272 MSSGPVVPMVWEGLNVVXTGRQMLGATNPXDSXPGTIRGDLCIQVGRNIIHGSDSVESAK 451
           +SSGPV+ M   G      G   L         P  IR    +   RN+ H SD  ++A+
Sbjct: 74  ISSGPVIAMRVSGNARKCIGSSRLWPRLEPTVQP--IRQRFALSDVRNVAHASDE-DAAE 130

Query: 452 KEIGLW 469
           KE+ L+
Sbjct: 131 KELQLF 136


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,706,577
Number of Sequences: 27780
Number of extensions: 223311
Number of successful extensions: 592
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)