Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P01_F_I18
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 36 0.004
SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter |Schizosa... 33 0.036
SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|ch... 29 0.58
SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|... 29 0.58
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 27 2.3
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 3.1
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg... 25 7.2
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 25 7.2
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/89 (21%), Positives = 46/89 (51%)
Frame = +2
Query: 380 EVTFSQYMTVSILCFVNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFA 559
E++ +++ + L ++ +D +A + + +EF++ + A ++ T +++ F
Sbjct: 25 ELSVNKWTILPALWVGGFLSALDMTIVASLYPVIGSEFKLMNN-ASYIVTAYLITNTAFQ 83
Query: 560 PIXGYLGDRYSRRVIMASGVALWSLTTFF 646
P+ G L D + RR + A ++L TF+
Sbjct: 84 PLYGRLSDIFGRRPTVVFANAAFTLGTFW 112
>SPBC2G2.01c |liz1|SPBC4B4.13c|pantothenate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 33.1 bits (72), Expect = 0.036
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +2
Query: 398 YMTVSILCFVNLINYMDRLTIAGV-LNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGY 574
+ +S C INY+DR +I L+ +Q + ++ + + VF Y++ Y
Sbjct: 30 WFILSYCCVSYFINYLDRSSINNAYLSGMQEDLKMHGNELQDINVVFTCGYIIGQLPGSY 89
Query: 575 LGDRYSRRVIMASGVALWSLTTFF 646
R R+ + LW L T F
Sbjct: 90 ALQRVPARLWFSVMNILWGLMTIF 113
>SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 497
Score = 29.1 bits (62), Expect = 0.58
Identities = 13/75 (17%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 413 ILCFVNLINYMDRLTI-AGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRY 589
+LC ++ YMD+ T + ++T+ + + ++ T F + +M+F+ L ++
Sbjct: 55 LLCLISAFQYMDKSTSNYSSIMGIRTDLNMVGNQYNWVGTSFYLGFMVFSLPLSTLLQKF 114
Query: 590 SRRVIMASGVALWSL 634
+ ++ + W +
Sbjct: 115 PLSKVTSAFIVAWGI 129
>SPBPB10D8.01 |||cysteine transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 552
Score = 29.1 bits (62), Expect = 0.58
Identities = 19/92 (20%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Frame = +2
Query: 377 REVTFSQYMTVSILCFV-NLINYMDRLTIA-GVLNNVQTEFEIGDGKAGFLQTVFVVAYM 550
+ + + Y TV ++ + +++ Y+D+ T++ + + + I + + T+F V ++
Sbjct: 79 KRLRWKLYFTVLVMLMILDMMLYIDKATLSYSSILGLFEDTHINSNQYNDINTLFYVGFV 138
Query: 551 LFAPIXGY-LGDRYSRRVIMASGVALWSLTTF 643
+ I G+ L R+ +A+ ALW++ F
Sbjct: 139 I-GQIPGHMLLQRFPVSKFVAASTALWTIIIF 169
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 27.1 bits (57), Expect = 2.3
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +2
Query: 338 LLQEKQAXRHNXLREVTFSQYMTVSILCFVNLINYMDRLTIAGVLNNVQTEFEIGD--GK 511
+L+ R+N + + + VSIL +N++ I G N Q + + G
Sbjct: 484 ILEAYFVPRNNPGAQPVIPRLIFVSILIALNIV---PAAFIFGFSNATQQHYRSREIVGY 540
Query: 512 AGFLQTVFVVAYMLFAPIXGYLGDRYSRR 598
F ++ VAY F P+ LG R+ R
Sbjct: 541 VHFFFSIGCVAYQSFIPLPFLLGPRFKFR 569
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 26.6 bits (56), Expect = 3.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 515 GFLQTVFVVAYMLFAPIXGYLGDRYSRRV 601
G + F + L P+ GY D+Y+ R+
Sbjct: 216 GIINVFFAIGSSLGGPVGGYFADQYTWRI 244
Score = 25.8 bits (54), Expect = 5.4
Identities = 18/98 (18%), Positives = 41/98 (41%)
Frame = +2
Query: 350 KQAXRHNXLREVTFSQYMTVSILCFVNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQT 529
+ A N + V+ S+ + +L V + +D +A + EF + + T
Sbjct: 75 QDAATTNTVSTVSVSKVLPALLLGVV--LAALDNTIVASTYTKIGAEFG-KFSQVSWTAT 131
Query: 530 VFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLTTF 643
++++ F P+ G D Y R+ + + ++ + F
Sbjct: 132 AYMISCTAFQPLFGKFCDIYGRKKTLLAAYCVFGIGCF 169
>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
diacylglycerol ethanolaminesphotranferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 386
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 398 YMTVSILCFVNLINYMDRLTIAGVLNNVQTEF 493
Y V IL F L++ +D T GVL NVQTE+
Sbjct: 315 YWNVLILPF--LVDAVDAYTF-GVLKNVQTEY 343
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 25.4 bits (53), Expect = 7.2
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +2
Query: 239 VLETLVIMDPRGITPNTSNQQLVINGDNDSATALLQEKQAXRHNXLREVTFS 394
++ T +++ P + PNT+ Q +I GDND+ H+ +T S
Sbjct: 800 MIGTALLISP-ALEPNTTYIQGIIPGDNDTIWYDWYNHSVINHDYDENITMS 850
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,122,310
Number of Sequences: 5004
Number of extensions: 36917
Number of successful extensions: 88
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 88
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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