BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P01_F_I18 (650 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 50 1e-06 05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 46 2e-05 01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 43 2e-04 07_01_0770 + 5912412-5912476,5913759-5913779,5914015-5914638,591... 39 0.003 01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 38 0.009 09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 37 0.012 03_06_0397 - 33624883-33625484,33625569-33625632,33625663-336257... 34 0.085 09_03_0090 + 12292125-12292427,12293848-12294608,12295170-12295668 30 1.8 09_02_0478 - 9749306-9749382,9749543-9749659,9749711-9750398,975... 29 3.2 10_08_0784 + 20529526-20529604,20529996-20530562,20530687-205316... 29 4.2 02_05_0242 + 27121152-27121316,27121404-27121515,27121616-271217... 29 4.2 08_02_0639 + 19625534-19625824,19626381-19627126,19627522-19628011 28 5.6 08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624 28 5.6 07_03_1516 + 27367518-27368552,27368828-27369097,27369616-27370062 28 5.6 11_01_0758 + 6362500-6363233,6363709-6365500 28 7.4 01_06_0248 + 27862048-27864310,27864331-27864776 27 9.8 >09_06_0351 + 22466160-22466217,22466514-22467052,22467186-22467293, 22467391-22467546,22467916-22468131,22468639-22468776, 22468880-22468981,22469089-22469146,22469346-22469408, 22469543-22469640 Length = 511 Score = 50.4 bits (115), Expect = 1e-06 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%) Frame = +2 Query: 389 FSQYMTVSILCFVN-LINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPI 565 F + TV +LCF + L+ MDR+ ++ + + +EF G +Q+ F Y+L + Sbjct: 178 FPKRWTVVLLCFFSFLLCNMDRVNMSIAILPMSSEFGWSPATVGLIQSSFFWGYLLTQIL 237 Query: 566 XGYLGDRYSRRVIMASGVALWSLTT 640 G DR+ +V++ GV WS+ T Sbjct: 238 GGIWADRFGGKVVLGFGVVWWSIAT 262 >05_05_0059 + 22011168-22011662,22012668-22012894,22013029-22013377, 22013464-22013508,22013589-22013735,22013851-22013988, 22014126-22014159,22014258-22014430 Length = 535 Score = 46.4 bits (105), Expect = 2e-05 Identities = 23/79 (29%), Positives = 41/79 (51%) Frame = +2 Query: 407 VSILCFVNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDR 586 V+++ V L+ DR+ ++ + ++ G +Q+ F+ Y+ + + G L DR Sbjct: 126 VALVAAVMLLCNADRVVMSVAVVPFAAQYGWSSSFLGIVQSSFLWGYVFSSMVGGALADR 185 Query: 587 YSRRVIMASGVALWSLTTF 643 Y + +MA ALWSL TF Sbjct: 186 YGGKKVMAGAAALWSLATF 204 >01_06_1363 - 36681605-36681789,36681875-36681908,36682017-36682154, 36682578-36682724,36682821-36682865,36683043-36683331, 36683443-36683669,36684109-36684528 Length = 494 Score = 42.7 bits (96), Expect = 2e-04 Identities = 21/44 (47%), Positives = 28/44 (63%) Frame = +2 Query: 512 AGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLTTF 643 AG +Q+ F+ Y++ I G L D Y + +MA GVALWSL TF Sbjct: 136 AGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATF 179 >07_01_0770 + 5912412-5912476,5913759-5913779,5914015-5914638, 5915264-5915439,5915526-5916124 Length = 494 Score = 39.1 bits (87), Expect = 0.003 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = +2 Query: 416 LCFVNLINYMDRLT---IAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDR 586 L +NL + M+R + V V F G G+L + + +P+ G L Sbjct: 40 LILINLASIMERADENLLPAVYKEVSAAFNAGPADLGYLTFLMNFLKSIASPLAGILSLH 99 Query: 587 YSRRVIMASGVALWSLTT 640 Y R ++A G W+L+T Sbjct: 100 YDRPTVLAIGTVFWALST 117 >01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672, 9914110-9914325,9914436-9914645,9914722-9914859, 9915076-9915177,9915508-9915603 Length = 478 Score = 37.5 bits (83), Expect = 0.009 Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 1/85 (1%) Frame = +2 Query: 389 FSQYMTVSILCF-VNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPI 565 F + + LCF L+ MDR+ ++ + + EF G +Q+ F Y+L Sbjct: 116 FPKRWAIVFLCFSAFLLCNMDRVNMSIAILPMSAEFGWNPQTVGLIQSSFFWGYLLTQIA 175 Query: 566 XGYLGDRYSRRVIMASGVALWSLTT 640 G D + ++ GV WS+ T Sbjct: 176 GGIWADTVGGKTVLGFGVIWWSIAT 200 >09_06_0242 - 21806370-21806483,21806574-21806660,21806865-21806917, 21806999-21807140,21807406-21807501,21808617-21808785, 21808859-21808939,21809032-21809106,21810322-21810387, 21811013-21811158,21811898-21812344 Length = 491 Score = 37.1 bits (82), Expect = 0.012 Identities = 27/114 (23%), Positives = 48/114 (42%) Frame = +2 Query: 299 QLVINGDNDSATALLQEKQAXRHNXLREVTFSQYMTVSILCFVNLINYMDRLTIAGVLNN 478 ++V G+ D A A E + L E +Y + +I MD++ ++ + Sbjct: 103 KVVEEGEGDVAAAAALEMRWPPWEGLAE----RYKLIGATSLAFVICNMDKVNLSVAIIP 158 Query: 479 VQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLTT 640 + ++ AG +Q+ F Y L G+L + R ++ GV WSL T Sbjct: 159 MSHQYGWNSSTAGLVQSSFFWGYALSQLPGGWLAKLFGGRRVLEIGVVAWSLAT 212 >03_06_0397 - 33624883-33625484,33625569-33625632,33625663-33625744, 33626081-33626649 Length = 438 Score = 34.3 bits (75), Expect = 0.085 Identities = 16/65 (24%), Positives = 28/65 (43%) Frame = +2 Query: 446 DRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVAL 625 D + V V F G G+L + + +P+ G L +Y R ++A G Sbjct: 5 DENLLPAVYKEVSAAFNAGPTDLGYLTFLMNFLKSIASPLAGVLALQYDRPAVLAIGTVF 64 Query: 626 WSLTT 640 W+++T Sbjct: 65 WAVST 69 >09_03_0090 + 12292125-12292427,12293848-12294608,12295170-12295668 Length = 520 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +2 Query: 560 PIXGYLGDRYSRRVIMASGVALWSLTTF 643 P+ Y RY+R ++A+G LW+ TF Sbjct: 64 PLAAYAAVRYNRAHVVAAGAFLWAAATF 91 >09_02_0478 - 9749306-9749382,9749543-9749659,9749711-9750398, 9750521-9751161,9751336-9751462 Length = 549 Score = 29.1 bits (62), Expect = 3.2 Identities = 18/51 (35%), Positives = 25/51 (49%) Frame = +2 Query: 497 IGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLTTFFG 649 +G G A LQT+ +A+ L A + L R+IM +A WS FG Sbjct: 426 MGFGHANVLQTL-ALAWKLLARMGYRLSAMLLARIIMQLALAYWSYIPIFG 475 >10_08_0784 + 20529526-20529604,20529996-20530562,20530687-20531639, 20532292-20532479,20532578-20533013 Length = 740 Score = 28.7 bits (61), Expect = 4.2 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 2/69 (2%) Frame = +2 Query: 428 NLINYMDRLTIAGVLNNVQTEFEIGDGK--AGFLQTVFVVAYMLFAPIXGYLGDRYSRRV 601 NL+ D TIAG + ++ EF + G + + ++ + G + D + RR Sbjct: 15 NLLQGWDNATIAGAVLYIKKEFNLQSEPLIEGLIVAMSLIGATIITTFSGAVADSFGRRP 74 Query: 602 IMASGVALW 628 ++ + L+ Sbjct: 75 MLIASAVLY 83 >02_05_0242 + 27121152-27121316,27121404-27121515,27121616-27121728, 27122024-27122379,27122515-27122590,27122682-27122768, 27122885-27122965,27123060-27123092,27123335-27123388, 27123482-27123523,27123649-27123727,27123813-27123883, 27123958-27124047 Length = 452 Score = 28.7 bits (61), Expect = 4.2 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +2 Query: 512 AGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLTTF 643 +GF + + ++ PI G L D+Y R+ +M V + L F Sbjct: 50 SGFQSAITGMGALVVTPIVGNLSDKYGRKALMTLPVTVAILPLF 93 >08_02_0639 + 19625534-19625824,19626381-19627126,19627522-19628011 Length = 508 Score = 28.3 bits (60), Expect = 5.6 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +2 Query: 560 PIXGYLGDRYSRRVIMASGVALWSLTTF 643 P+ Y RY R ++A G LW+ TF Sbjct: 60 PLAAYAAVRYDRARVVALGAFLWAAATF 87 >08_01_0370 + 3275771-3275789,3275972-3276976,3277062-3277624 Length = 528 Score = 28.3 bits (60), Expect = 5.6 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = +2 Query: 449 RLTIAGVLNNVQTEFEIGDGKA--GFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGV 619 RL LN F DG A G + F+ Y + G+LGDR R+ + G+ Sbjct: 98 RLHTKNTLNIGWLPFNTIDGSALLGEIDVAFLAVYSVGMFFAGHLGDRMDLRIFLTIGM 156 >07_03_1516 + 27367518-27368552,27368828-27369097,27369616-27370062 Length = 583 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -3 Query: 312 FITNCWFEVFGVIPRGSMI 256 +IT C FEVF IPR S+I Sbjct: 145 YITACIFEVFSFIPRRSLI 163 >11_01_0758 + 6362500-6363233,6363709-6365500 Length = 841 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -3 Query: 306 TNCWFEVFGVIPRGSMITRVSSTFKFHEKATAFRNIY*RNVFKL 175 T+ W V P+G+ +R+ +T KF E A + + VFK+ Sbjct: 256 TSVWDVVSRAFPKGNCGSRIVTTTKFEEVALTSCGYHSKYVFKI 299 >01_06_0248 + 27862048-27864310,27864331-27864776 Length = 902 Score = 27.5 bits (58), Expect = 9.8 Identities = 15/42 (35%), Positives = 20/42 (47%) Frame = -3 Query: 381 SRXXLCLXACFSCRSAVAESLSPFITNCWFEVFGVIPRGSMI 256 S+ LCL AC + RS V ES + WF I + S + Sbjct: 328 SQGRLCLRACRTVRSTVRESDCGIRIHFWFPAVWSIQQRSFV 369 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,595,066 Number of Sequences: 37544 Number of extensions: 202484 Number of successful extensions: 471 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 461 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 471 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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