Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P01_F_I18
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical...   105   4e-23
Z92825-3|CAB07311.1|  531|Caenorhabditis elegans Hypothetical pr...   100   2e-21
Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    97   7e-21
Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical pr...    91   6e-19
Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical pr...    38   0.008
Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical pr...    38   0.008
Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical pr...    37   0.014
Z93388-4|CAB07662.1|  456|Caenorhabditis elegans Hypothetical pr...    33   0.23 
U40953-6|AAB52651.1|  809|Caenorhabditis elegans Hypothetical pr...    31   0.94 
Z68215-3|CAA92452.3|  415|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z83236-1|CAB05777.1|  445|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned expre...    29   3.8  
U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned expre...    29   3.8  
U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned expre...    29   3.8  
AF025463-2|AAB71006.1|  387|Caenorhabditis elegans Serpentine re...    28   6.6  

>AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical
           protein Y111B2A.19 protein.
          Length = 518

 Score =  105 bits (251), Expect = 4e-23
 Identities = 45/83 (54%), Positives = 62/83 (74%)
 Frame = +2

Query: 395 QYMTVSILCFVNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGY 574
           +++T SIL  VNL+NYMDR TI GV++ + T F+I D   G LQTVF+V YM FAP+ GY
Sbjct: 22  KWVTCSILLLVNLLNYMDRYTIVGVMSRLATFFDIDDKGQGLLQTVFIVFYMFFAPLFGY 81

Query: 575 LGDRYSRRVIMASGVALWSLTTF 643
           LGDRY+R+++M +G+ +W L  F
Sbjct: 82  LGDRYNRKMLMITGICIWILAVF 104


>Z92825-3|CAB07311.1|  531|Caenorhabditis elegans Hypothetical
           protein C13C4.5 protein.
          Length = 531

 Score = 99.5 bits (237), Expect = 2e-21
 Identities = 43/81 (53%), Positives = 60/81 (74%)
 Frame = +2

Query: 401 MTVSILCFVNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLG 580
           + V+IL  +NL+NYMDR TIAGVLN+VQT + I D  AG +QT F+V +++F+PI G+LG
Sbjct: 57  VVVAILFIINLLNYMDRYTIAGVLNDVQTYYNISDAWAGLIQTTFMVFFIIFSPICGFLG 116

Query: 581 DRYSRRVIMASGVALWSLTTF 643
           DRY+R+ I   G+A+W    F
Sbjct: 117 DRYNRKWIFVVGIAIWVSAVF 137


>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 97.5 bits (232), Expect = 7e-21
 Identities = 40/77 (51%), Positives = 59/77 (76%)
 Frame = +2

Query: 398 YMTVSILCFVNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYL 577
           Y++V+ L  VNL+NY+DR T+AGVL  VQT + I D   G +QTVF++++M+F+P+ GYL
Sbjct: 8   YISVTALFVVNLLNYVDRYTVAGVLTQVQTYYNISDSLGGLIQTVFLISFMVFSPVCGYL 67

Query: 578 GDRYSRRVIMASGVALW 628
           GDR++R+ IM  GV +W
Sbjct: 68  GDRFNRKWIMIIGVGIW 84


>Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical
           protein F09A5.1 protein.
          Length = 483

 Score = 91.1 bits (216), Expect = 6e-19
 Identities = 38/77 (49%), Positives = 58/77 (75%)
 Frame = +2

Query: 398 YMTVSILCFVNLINYMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYL 577
           Y+++ IL  VNLIN +DR TIAGVL +VQ+ + I D   G +QTVF++++M+ +PI GYL
Sbjct: 8   YISIVILFVVNLINNVDRYTIAGVLPDVQSYYNINDSMGGMIQTVFLISFMIGSPICGYL 67

Query: 578 GDRYSRRVIMASGVALW 628
           GDR++R+ +M  G+ +W
Sbjct: 68  GDRFNRKYVMLVGIVIW 84


>Z69384-8|CAM06585.1|  495|Caenorhabditis elegans Hypothetical
           protein T11G6.2b protein.
          Length = 495

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +2

Query: 515 GFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLTTF-FG 649
           G L T F+VAY +   I G LGD Y+ R ++ +G+ L S+  F FG
Sbjct: 83  GVLDTGFLVAYAIGLYICGILGDNYNPRRLLTAGMMLSSIIVFCFG 128


>Z69384-7|CAA93417.2|  502|Caenorhabditis elegans Hypothetical
           protein T11G6.2a protein.
          Length = 502

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +2

Query: 515 GFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLTTF-FG 649
           G L T F+VAY +   I G LGD Y+ R ++ +G+ L S+  F FG
Sbjct: 90  GVLDTGFLVAYAIGLYICGILGDNYNPRRLLTAGMMLSSIIVFCFG 135


>Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical
           protein F21G4.1 protein.
          Length = 640

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 17/62 (27%), Positives = 32/62 (51%)
 Frame = +2

Query: 458 IAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLT 637
           + G+L  ++  F     K+G+L +++ + + +   + GY+G  Y    I   GV L SL+
Sbjct: 37  VVGMLTTLEKRFGFSSEKSGWLLSLYDIGHTMAILLIGYIGSHYHLPRITGIGVILSSLS 96

Query: 638 TF 643
            F
Sbjct: 97  MF 98


>Z93388-4|CAB07662.1|  456|Caenorhabditis elegans Hypothetical
           protein T10C6.6a protein.
          Length = 456

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
 Frame = +2

Query: 515 GFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSLT-TFFG 649
           G L  +F+ AY       G+LGDR + ++++A+G+   ++T T FG
Sbjct: 63  GSLDAIFMAAYAAALFFWGWLGDRLNPKLVVAAGMVGSAVTLTLFG 108


>U40953-6|AAB52651.1|  809|Caenorhabditis elegans Hypothetical
           protein F53B1.8 protein.
          Length = 809

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 12/59 (20%), Positives = 29/59 (49%)
 Frame = +2

Query: 458 IAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGVALWSL 634
           +   +++++  F+      G +   +   Y+L      Y G R+S+  ++A+G+A  +L
Sbjct: 124 VPSAISSIERRFKFSTSHMGRIVQFYDFGYVLLCIPVSYFGGRHSKPAVLAAGLACMAL 182


>Z68215-3|CAA92452.3|  415|Caenorhabditis elegans Hypothetical
           protein C53B4.3 protein.
          Length = 415

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = +2

Query: 494 EIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRR 598
           ++ D   G++QT+F V  M+  P+ GY+  ++  R
Sbjct: 49  QLSDADFGYIQTIFGVFQMIGGPLFGYVIQKFGIR 83


>Z83236-1|CAB05777.1|  445|Caenorhabditis elegans Hypothetical
           protein K10H10.1 protein.
          Length = 445

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 17/69 (24%), Positives = 27/69 (39%)
 Frame = +2

Query: 440 YMDRLTIAGVLNNVQTEFEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASGV 619
           Y  R ++      V  EF      +G + + F   Y L     G + D+Y    I+    
Sbjct: 36  YASRASLPISAAAVAKEFAWNKTDSGTVLSCFFWGYALTQVFAGRIADKYGAEKILPYSS 95

Query: 620 ALWSLTTFF 646
             W++ TFF
Sbjct: 96  LAWTMLTFF 104


>U29379-7|ABC71826.1|  710|Caenorhabditis elegans Patterned
           expression site protein22, isoform c protein.
          Length = 710

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +2

Query: 491 FEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASG 616
           ++  DG   F+ ++ +  Y+L  P+   L ++Y +R ++ +G
Sbjct: 107 YQESDGLTVFIGSLIIGTYLLVGPLVSALCNKYEQRYVVMAG 148


>U29379-6|AAF99981.3|  677|Caenorhabditis elegans Patterned
           expression site protein22, isoform a protein.
          Length = 677

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +2

Query: 491 FEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASG 616
           ++  DG   F+ ++ +  Y+L  P+   L ++Y +R ++ +G
Sbjct: 52  YQESDGLTVFIGSLIIGTYLLVGPLVSALCNKYEQRYVVMAG 93


>U29379-5|ABC71825.1|  777|Caenorhabditis elegans Patterned
           expression site protein22, isoform b protein.
          Length = 777

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 10/42 (23%), Positives = 24/42 (57%)
 Frame = +2

Query: 491 FEIGDGKAGFLQTVFVVAYMLFAPIXGYLGDRYSRRVIMASG 616
           ++  DG   F+ ++ +  Y+L  P+   L ++Y +R ++ +G
Sbjct: 107 YQESDGLTVFIGSLIIGTYLLVGPLVSALCNKYEQRYVVMAG 148


>AF025463-2|AAB71006.1|  387|Caenorhabditis elegans Serpentine
           receptor, class t protein54 protein.
          Length = 387

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -3

Query: 483 WTLFKTPAIVNLSM*LMRLTKHNIETVIYCEKVTSRXXLCLXACFSCRSAVAESL 319
           W+L    A V+  + L +  +HN++ V   + + SR  LC   C++    VAE++
Sbjct: 282 WSLSSGSAGVSYIL-LNKTIRHNLKKVFLSKAIRSRCGLC---CYATEELVAENV 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,535,349
Number of Sequences: 27780
Number of extensions: 199824
Number of successful extensions: 523
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)